| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474844
Identifier: 113474844
GI number: 113474844
Start: 1662563
End: 1662811
Strand: Reverse
Name: 113474844
Synonym: Tery_1063
Alternate gene names: NA
Gene position: 1662811-1662563 (Counterclockwise)
Preceding gene: 113474846
Following gene: 113474843
Centisome position: 21.46
GC content: 38.15
Gene sequence:
>249_bases ATGTGTATTTGTGTGAACTGCCACTATGTGGATCAGTGTGTGACTTATCATGCTGTAGAAACTCAGCACGAACAACTTCA TTTAACAGAAAATCCAGATTTTGACCCAGTTGAACCTACTATAAATGTTAATATTCGTCCCAAACAAAACGAAATTGAGA TGGAATGGGATGTTGTCGGTTGTGAAAGTTTTCTAGAAGAAATGGGCAAATGGGCAAAATTAAGACCTGGTGAACTTATC CCTACCTGA
Upstream 100 bases:
>100_bases GAAAAGAATAAACTTCAGTGTTTCAAAACCCTGGCTTCATTCAGAAGTACTGATAACTATTAACTGATAACTAAAATGAC CATCAATGAGGTATTTAAAA
Downstream 100 bases:
>100_bases ATTCAACCTAAAATGAAATAAGTTAATAAGTATACAGGTATCTTGCCTACCATAACTATACTTCACCTAATAGAAATAGC TTAATTTTTGCTACCCATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MCICVNCHYVDQCVTYHAVETQHEQLHLTENPDFDPVEPTINVNIRPKQNEIEMEWDVVGCESFLEEMGKWAKLRPGELI PT
Sequences:
>Translated_82_residues MCICVNCHYVDQCVTYHAVETQHEQLHLTENPDFDPVEPTINVNIRPKQNEIEMEWDVVGCESFLEEMGKWAKLRPGELI PT >Mature_82_residues MCICVNCHYVDQCVTYHAVETQHEQLHLTENPDFDPVEPTINVNIRPKQNEIEMEWDVVGCESFLEEMGKWAKLRPGELI PT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9543; Mature: 9543
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 6.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 9.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCICVNCHYVDQCVTYHAVETQHEQLHLTENPDFDPVEPTINVNIRPKQNEIEMEWDVVG CEEEEECHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCEEEEEEEEC CESFLEEMGKWAKLRPGELIPT HHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MCICVNCHYVDQCVTYHAVETQHEQLHLTENPDFDPVEPTINVNIRPKQNEIEMEWDVVG CEEEEECHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCEEEEEEEEC CESFLEEMGKWAKLRPGELIPT HHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA