Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474659

Identifier: 113474659

GI number: 113474659

Start: 1322985

End: 1323788

Strand: Direct

Name: 113474659

Synonym: Tery_0833

Alternate gene names: NA

Gene position: 1322985-1323788 (Clockwise)

Preceding gene: 113474655

Following gene: 113474660

Centisome position: 17.07

GC content: 31.09

Gene sequence:

>804_bases
ATGTTAACACCTATTATTGTCGTGGAATCAAGATTAGCCCAAGTTTCTCCACCTCCAGAACCAAATTTGCTCAAAATAGA
ATATGTTTGGATGGGTGTATCTGGATTACTATTAATATTACTAATTATTTTGGGCATCTTTCACAAAGCAAAAATCAAAG
GATTTAATAAAAAACTTAGCTTAGAAGTATTTAGAAATAAAAACCTCCAACAAAAGTATAAATTAGCTTTAGCAACCATA
GCCAAAATGGAAAAAAATCCTGACCTAATCCATTCTCGGGAATTTAACTTAGATTGCTTAAGAATGCGGATGGAAGAGGA
AGCTTTCAACTTTGGTATTGTGAACCAAATTAAGGAAAAAGTAAAACAGCACATTAATATAGCACTCCAGCCTAATTCAA
GTATAACAGGAGAGAAAAGAAATCCGAATGATCAAAAAATTAATTCAATATTTGAGGTAGAATACAAGACTGGAGAAACA
GGTAAAAACCAAATAAAAAGAGTATTATTTCGGGTCTCAATTAAACTGAAAAAGTTATCAAATCAGGTAAGTTATCAAAC
TATTAATCAAATTATTGATTGTTTAGAAACCTATTTGAGTCCTAATAATGACCATGATAATTGGACTCCTACTATTCAAG
GTCAGATTGTACATATTGATTGGGATAAAAAGGCAAAACCAGTACCAATGTTGGTAGTAGAACAATTTAATGATGAGGTA
ATATTACGTACTAACAAATCTATTTTAAAAAGTCCTACTGCATTACAACCAGAACTACCCGCAGATTCAAAAAAGTATCA
CTAA

Upstream 100 bases:

>100_bases
CTACAAGTATAATTATTAGGTATTTATTCTCAAAACATTAACTCCCTGATTTTTAAGCTTAAACTTCTGTAAATTCATCG
TTAAATTATTCGTAGAGTTT

Downstream 100 bases:

>100_bases
AGAAGGCACAAACAAAAATTATAAAAGGCAAATTTCAAAGTACATAAAATCAAAAATCATTCAAACAGGATTCAAAAAAA
TTATCAATAAATCCCATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MLTPIIVVESRLAQVSPPPEPNLLKIEYVWMGVSGLLLILLIILGIFHKAKIKGFNKKLSLEVFRNKNLQQKYKLALATI
AKMEKNPDLIHSREFNLDCLRMRMEEEAFNFGIVNQIKEKVKQHINIALQPNSSITGEKRNPNDQKINSIFEVEYKTGET
GKNQIKRVLFRVSIKLKKLSNQVSYQTINQIIDCLETYLSPNNDHDNWTPTIQGQIVHIDWDKKAKPVPMLVVEQFNDEV
ILRTNKSILKSPTALQPELPADSKKYH

Sequences:

>Translated_267_residues
MLTPIIVVESRLAQVSPPPEPNLLKIEYVWMGVSGLLLILLIILGIFHKAKIKGFNKKLSLEVFRNKNLQQKYKLALATI
AKMEKNPDLIHSREFNLDCLRMRMEEEAFNFGIVNQIKEKVKQHINIALQPNSSITGEKRNPNDQKINSIFEVEYKTGET
GKNQIKRVLFRVSIKLKKLSNQVSYQTINQIIDCLETYLSPNNDHDNWTPTIQGQIVHIDWDKKAKPVPMLVVEQFNDEV
ILRTNKSILKSPTALQPELPADSKKYH
>Mature_267_residues
MLTPIIVVESRLAQVSPPPEPNLLKIEYVWMGVSGLLLILLIILGIFHKAKIKGFNKKLSLEVFRNKNLQQKYKLALATI
AKMEKNPDLIHSREFNLDCLRMRMEEEAFNFGIVNQIKEKVKQHINIALQPNSSITGEKRNPNDQKINSIFEVEYKTGET
GKNQIKRVLFRVSIKLKKLSNQVSYQTINQIIDCLETYLSPNNDHDNWTPTIQGQIVHIDWDKKAKPVPMLVVEQFNDEV
ILRTNKSILKSPTALQPELPADSKKYH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30734; Mature: 30734

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTPIIVVESRLAQVSPPPEPNLLKIEYVWMGVSGLLLILLIILGIFHKAKIKGFNKKLS
CCCCEEEECHHHHHCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCEEE
LEVFRNKNLQQKYKLALATIAKMEKNPDLIHSREFNLDCLRMRMEEEAFNFGIVNQIKEK
EEEECCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHCCHHHHHHHHH
VKQHINIALQPNSSITGEKRNPNDQKINSIFEVEYKTGETGKNQIKRVLFRVSIKLKKLS
HHHHCEEEECCCCCCCCCCCCCCHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
NQVSYQTINQIIDCLETYLSPNNDHDNWTPTIQGQIVHIDWDKKAKPVPMLVVEQFNDEV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECEEEEEEECCCCCCCCCEEEEECCCCCE
ILRTNKSILKSPTALQPELPADSKKYH
EEEECHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLTPIIVVESRLAQVSPPPEPNLLKIEYVWMGVSGLLLILLIILGIFHKAKIKGFNKKLS
CCCCEEEECHHHHHCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCEEE
LEVFRNKNLQQKYKLALATIAKMEKNPDLIHSREFNLDCLRMRMEEEAFNFGIVNQIKEK
EEEECCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHCCHHHHHHHHH
VKQHINIALQPNSSITGEKRNPNDQKINSIFEVEYKTGETGKNQIKRVLFRVSIKLKKLS
HHHHCEEEECCCCCCCCCCCCCCHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
NQVSYQTINQIIDCLETYLSPNNDHDNWTPTIQGQIVHIDWDKKAKPVPMLVVEQFNDEV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECEEEEEEECCCCCCCCCEEEEECCCCCE
ILRTNKSILKSPTALQPELPADSKKYH
EEEECHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA