Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474655

Identifier: 113474655

GI number: 113474655

Start: 1317053

End: 1317484

Strand: Direct

Name: 113474655

Synonym: Tery_0829

Alternate gene names: NA

Gene position: 1317053-1317484 (Clockwise)

Preceding gene: 113474654

Following gene: 113474659

Centisome position: 16.99

GC content: 29.86

Gene sequence:

>432_bases
ATGATGACATTTAATAATAATCTACCCCAAAAAAATCAAAATAACTGGCAACATCAGTTAGATAAATTTGTGAAAGCTAA
TCAAAAAGAATTAGCAGCTTTAGCATGGGGTTTAAAACTAGAAAACGGAGAAACTGATGAAACAATTGGAATTGATTTAA
AAGAAACACCAAAATTTGTATATTGTTCAAAAGCAGCCATAGAAACATTAAACCGCAACGTTGATGGTAAAATTCAGGAA
ATATTAGGCTTAATAGATGGTTATAAACCAGAAATAGAAGTATTAATGATTGCCATTGGTGACAGTCAAATTAAATTGGT
TTACTTTCAACCAGAAATATCACCACCTAATTGTTTTGAACAATTGGGTCATAACCTTGATGCTTTATTAGAAATATTAG
AAACAGGAATGAGTCAATTTATCAACCTGTAA

Upstream 100 bases:

>100_bases
CACTGTTTTATCCTAGAGAAGCTGTATAAAAATTACCTCTCTAATCCCTAATATGACTCTAATATTTATCAATAAAACTA
TTTTACTCTAAATATAAATT

Downstream 100 bases:

>100_bases
AATAGTCATTAGTTAGTATCCAAATATCATCTTTAGAGAATCAGTTTTAATGAAGCTATAAGTTATAATTAAGAATTTCA
ATTCTGACTTAATTATTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MMTFNNNLPQKNQNNWQHQLDKFVKANQKELAALAWGLKLENGETDETIGIDLKETPKFVYCSKAAIETLNRNVDGKIQE
ILGLIDGYKPEIEVLMIAIGDSQIKLVYFQPEISPPNCFEQLGHNLDALLEILETGMSQFINL

Sequences:

>Translated_143_residues
MMTFNNNLPQKNQNNWQHQLDKFVKANQKELAALAWGLKLENGETDETIGIDLKETPKFVYCSKAAIETLNRNVDGKIQE
ILGLIDGYKPEIEVLMIAIGDSQIKLVYFQPEISPPNCFEQLGHNLDALLEILETGMSQFINL
>Mature_143_residues
MMTFNNNLPQKNQNNWQHQLDKFVKANQKELAALAWGLKLENGETDETIGIDLKETPKFVYCSKAAIETLNRNVDGKIQE
ILGLIDGYKPEIEVLMIAIGDSQIKLVYFQPEISPPNCFEQLGHNLDALLEILETGMSQFINL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16207; Mature: 16207

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTFNNNLPQKNQNNWQHQLDKFVKANQKELAALAWGLKLENGETDETIGIDLKETPKFV
CCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCEEECCCCCCCEECCCCCCCCCEE
YCSKAAIETLNRNVDGKIQEILGLIDGYKPEIEVLMIAIGDSQIKLVYFQPEISPPNCFE
EEHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEEECCCCCCCHHHH
QLGHNLDALLEILETGMSQFINL
HHCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMTFNNNLPQKNQNNWQHQLDKFVKANQKELAALAWGLKLENGETDETIGIDLKETPKFV
CCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCEEECCCCCCCEECCCCCCCCCEE
YCSKAAIETLNRNVDGKIQEILGLIDGYKPEIEVLMIAIGDSQIKLVYFQPEISPPNCFE
EEHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEEECCCCCCCHHHH
QLGHNLDALLEILETGMSQFINL
HHCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA