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The map label for this gene is hypE [H]

Identifier: 113474626

GI number: 113474626

Start: 1264286

End: 1265392

Strand: Direct

Name: hypE [H]

Synonym: Tery_0797

Alternate gene names: 113474626

Gene position: 1264286-1265392 (Clockwise)

Preceding gene: 113474625

Following gene: 113474627

Centisome position: 16.31

GC content: 44.44

Gene sequence:

>1107_bases
ATGACAAACTCTCTATCCAACGAACCCAAACAACATTCTTTATTTAAAAAAATCGAACGAGCGCGACGTCGCCCTACAAA
AGTTCGTGACACCAACATTACTCTCGCTTATGGTAGCGGCGGTAAAGCAATGCGTGACCTCATAGAAGATATTTTTGTCA
GCAATTTTGACAACCCTATTCTATCTCAACTAGAAGACCAAGCAACATTTGACCTGGCAACCTTTACCGCTCAAGGAGAC
AGACTTGCTTTTACCACCGACTCCTATGTAGTTGACCCCATCTTTTTTCCTGGAGGTAATATTGGTGAACTAGCAGTCAA
CGGCACCGTTAACGATCTAGCTGTAAGTGGCGCAAAACCTTTATATCTCTCCTGTGGAATGATTATTGAAGAAGGTTTCC
CAGTTGACTCCCTCCGAAAAATAGCAAAAAGTATGAAAGTTGCAGCAGATGTCGCTGGAGTAAAAATTGTTACAGGAGAT
ACAAAAGTTGTTCCTCAAGGCGCTGCAGACAAATTATTTATCAATACTGCGGGGGTGGGTGTAGTTCGCTCTGGTATTTC
TATTTCTGCCCAAAATATCCAACCGGGGGATACCGTTATTGTCAATGGTTATCTTGGAGACCACGGAGCAGCTATTACAG
TCGCCCGTGGAGACCTGGCCTTAGCAACGGAAGTCAAAAGCGATACTCAAGCTTTAAATGGTTTGGTCGATATTATTCTT
GATGTTTGTCTGGAAGTACGGGCGATGCGAGATGCTACCCGTGGCGGTGTAGCAACAGTATTAAATGAATTTGCCATGAG
TTCTGAGGTAGGGATACGACTTTTTGAATCTTCTCTACCAGTGCGGGAAGAGGTGCAGGGAGTCTGTGAAATTCTCGGTC
TCGACCCTTTATATTTTGCCAATGAAGGTAAGTTAGTGACAGTGGTGCCCAGAGAAAAGGGGGAAGCTGTTTTGGCAGCA
ATGAAATCTCATCCTGCGGGTATTGATGCTGCTATTGTGGGGGAAGTTATTGCTTCTCCCCCCGGAATTTTGTTCTTGCA
AACTACATTCGGCACCGAACGCATTGTGGATATGTTGGTAGGAGAACAACTGCCAAGAATTTGTTAG

Upstream 100 bases:

>100_bases
ACGTCAGGTTGAAAATTTGAAAAAAATATTATCGTAAATAGATAACTAAATCTAAAAATTAGCAATCTTAATAAAATTGA
TATTTAAACTGATATTTAAT

Downstream 100 bases:

>100_bases
GCAGGAGCAACACGGAAGTCAAAAGTCAAAATTTAGGAAGTCAAAATTTAGAAAGTTAAAAGTCAAAAGTTAGATTTTAA
TGGTTTAAAACTTGGGAAGT

Product: hydrogenase expression/formation protein HypE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MTNSLSNEPKQHSLFKKIERARRRPTKVRDTNITLAYGSGGKAMRDLIEDIFVSNFDNPILSQLEDQATFDLATFTAQGD
RLAFTTDSYVVDPIFFPGGNIGELAVNGTVNDLAVSGAKPLYLSCGMIIEEGFPVDSLRKIAKSMKVAADVAGVKIVTGD
TKVVPQGAADKLFINTAGVGVVRSGISISAQNIQPGDTVIVNGYLGDHGAAITVARGDLALATEVKSDTQALNGLVDIIL
DVCLEVRAMRDATRGGVATVLNEFAMSSEVGIRLFESSLPVREEVQGVCEILGLDPLYFANEGKLVTVVPREKGEAVLAA
MKSHPAGIDAAIVGEVIASPPGILFLQTTFGTERIVDMLVGEQLPRIC

Sequences:

>Translated_368_residues
MTNSLSNEPKQHSLFKKIERARRRPTKVRDTNITLAYGSGGKAMRDLIEDIFVSNFDNPILSQLEDQATFDLATFTAQGD
RLAFTTDSYVVDPIFFPGGNIGELAVNGTVNDLAVSGAKPLYLSCGMIIEEGFPVDSLRKIAKSMKVAADVAGVKIVTGD
TKVVPQGAADKLFINTAGVGVVRSGISISAQNIQPGDTVIVNGYLGDHGAAITVARGDLALATEVKSDTQALNGLVDIIL
DVCLEVRAMRDATRGGVATVLNEFAMSSEVGIRLFESSLPVREEVQGVCEILGLDPLYFANEGKLVTVVPREKGEAVLAA
MKSHPAGIDAAIVGEVIASPPGILFLQTTFGTERIVDMLVGEQLPRIC
>Mature_367_residues
TNSLSNEPKQHSLFKKIERARRRPTKVRDTNITLAYGSGGKAMRDLIEDIFVSNFDNPILSQLEDQATFDLATFTAQGDR
LAFTTDSYVVDPIFFPGGNIGELAVNGTVNDLAVSGAKPLYLSCGMIIEEGFPVDSLRKIAKSMKVAADVAGVKIVTGDT
KVVPQGAADKLFINTAGVGVVRSGISISAQNIQPGDTVIVNGYLGDHGAAITVARGDLALATEVKSDTQALNGLVDIILD
VCLEVRAMRDATRGGVATVLNEFAMSSEVGIRLFESSLPVREEVQGVCEILGLDPLYFANEGKLVTVVPREKGEAVLAAM
KSHPAGIDAAIVGEVIASPPGILFLQTTFGTERIVDMLVGEQLPRIC

Specific function: Unknown

COG id: COG0309

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hypE family [H]

Homologues:

Organism=Escherichia coli, GI226510967, Length=338, Percent_Identity=54.4378698224852, Blast_Score=359, Evalue=1e-100,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR011854
- InterPro:   IPR016188 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: NA

Molecular weight: Translated: 39078; Mature: 38947

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNSLSNEPKQHSLFKKIERARRRPTKVRDTNITLAYGSGGKAMRDLIEDIFVSNFDNPI
CCCCCCCCCHHHHHHHHHHHHHCCCCCEECCEEEEEECCCCHHHHHHHHHHHHCCCCCHH
LSQLEDQATFDLATFTAQGDRLAFTTDSYVVDPIFFPGGNIGELAVNGTVNDLAVSGAKP
HHHHHHHHHEEEEEEEECCCEEEEEECCEEECEEECCCCCCCEEEECCCHHHHEECCCCC
LYLSCGMIIEEGFPVDSLRKIAKSMKVAADVAGVKIVTGDTKVVPQGAADKLFINTAGVG
EEEECCCCEECCCCHHHHHHHHHHHHHHHHHCCEEEEECCCEECCCCCCCEEEEEECCCH
VVRSGISISAQNIQPGDTVIVNGYLGDHGAAITVARGDLALATEVKSDTQALNGLVDIIL
HHCCCCEEEECCCCCCCEEEEEEEECCCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHHH
DVCLEVRAMRDATRGGVATVLNEFAMSSEVGIRLFESSLPVREEVQGVCEILGLDPLYFA
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEE
NEGKLVTVVPREKGEAVLAAMKSHPAGIDAAIVGEVIASPPGILFLQTTFGTERIVDMLV
CCCCEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH
GEQLPRIC
HHCCCCCC
>Mature Secondary Structure 
TNSLSNEPKQHSLFKKIERARRRPTKVRDTNITLAYGSGGKAMRDLIEDIFVSNFDNPI
CCCCCCCCHHHHHHHHHHHHHCCCCCEECCEEEEEECCCCHHHHHHHHHHHHCCCCCHH
LSQLEDQATFDLATFTAQGDRLAFTTDSYVVDPIFFPGGNIGELAVNGTVNDLAVSGAKP
HHHHHHHHHEEEEEEEECCCEEEEEECCEEECEEECCCCCCCEEEECCCHHHHEECCCCC
LYLSCGMIIEEGFPVDSLRKIAKSMKVAADVAGVKIVTGDTKVVPQGAADKLFINTAGVG
EEEECCCCEECCCCHHHHHHHHHHHHHHHHHCCEEEEECCCEECCCCCCCEEEEEECCCH
VVRSGISISAQNIQPGDTVIVNGYLGDHGAAITVARGDLALATEVKSDTQALNGLVDIIL
HHCCCCEEEECCCCCCCEEEEEEEECCCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHHH
DVCLEVRAMRDATRGGVATVLNEFAMSSEVGIRLFESSLPVREEVQGVCEILGLDPLYFA
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEE
NEGKLVTVVPREKGEAVLAAMKSHPAGIDAAIVGEVIASPPGILFLQTTFGTERIVDMLV
CCCCEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH
GEQLPRIC
HHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1849603; 9278503 [H]