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The map label for this gene is rsbU [H]

Identifier: 113474582

GI number: 113474582

Start: 1194175

End: 1195599

Strand: Direct

Name: rsbU [H]

Synonym: Tery_0739

Alternate gene names: 113474582

Gene position: 1194175-1195599 (Clockwise)

Preceding gene: 113474581

Following gene: 113474583

Centisome position: 15.41

GC content: 38.46

Gene sequence:

>1425_bases
ATGAATGTACTACCTGTATATGGAAATTCCCCTGAACCTAGTGACCATATTGCTACTGAAAATTCCTCACCAGTAACCTC
TGCATCTGCTATTCAAAAAATGGTGGCTCGTTTAAATAAGGAACAACAAAATGTTAATGATTTATTAAGTTCTCTAGGCT
TTGCCTTGCGTAGCTTCAATAATCTCAACCAGTTTCTAGAATTAATTCCACTTATGGGCTGTCGAGTAACTGATGCAGAT
GGCGGGGCGTTGGTATTATTTAAGCCTAATGGACAGGTTAGGTTCCAACAATTACACTGCCAAGAAGGCCAAAAATGTCA
GGATATCCGAAAAGCATTAGAAATAGCAACTCGTCAATTGATTGCAGAAACAACCTTGCTTGCCGAACTGCAGGAAGTGT
CTATTCAAGCTGCTAGTCTAGACTACCAAGTTAGCAATTATTTAGGAAATGATGTTCAATTATTTGGCACGTCAATTCTA
GTAAAAAACTCAGAACGAGGCCGTTTATATGTATTTAGTCACGACCCAGAATATGCTTGGACACCAACAAGGCAAAAATT
AATTCGCCTAGTAGCAGACCAGACAGCAGTAGCGATCGCCAATGATGAACTATCTAGTTCCTTACGAGAAAAAGAACGTT
TAGACCGAGAAGTGGAAATAGGGGCAGAAATTCAACTCCAACTATTACCACCAAAATGTCCAGAAATTCCTGGTGTTACC
CTGGCAGCACGGTGTAAAACAGCGAACCGAGTAGGAGGAGATTATTATGACTTTATTCCCTCTAACTACGACCAGGTTAA
TTCTAAGCAAAAAAAACAGGACTCCTGTAAGTGGAGTATTGTAATTGGAGATGTCATGGGTAAAGGCGTACCTGCGGGTT
TAATTATGACCATGACCAGAGGAATGTTGAGAGCGGAGGTATTAAACCGCCACTCACCAGCACGAGTACTACAACATTTG
AACCAAGTTATGTACGCTGATCTGGAAAATTCCCATAGATTTGTAACTTTATTTTATTCAGAGTATGATCCAGAAACTAC
AATTTTGTCCTATAGTAATGCTGCTCACCATCCTCCCATGTTGTGGCAAGCTGCTAGTAATTCTATTGTGAATTTGGATA
CTCTGGGAATGTTAATTGGTTTGGAAGTAGATTCTGAATATAATGAAGCACAAGTAAAACTTCATCCAGGAGATACTATC
ATTTATTACACAGATGGGTTTACAGATGCAGCTAATAAGCACGGCGATCGTTATGATGATATTAAGTTAAGTCAAGCGTT
CAAATTTGCGTGTCAAAATTATCAAGAACCACAAGAAATATTAGATTATTTATTTGAGCAAGTGGATCAATTTGTTGGAG
TAGAAAATAATAACCCAGATGATATGACTCTAGTGGTAATGAGGGTAAAACTTAATGAAAAATAA

Upstream 100 bases:

>100_bases
ATCTAGGAAAACAATAAATCTCATAATTTCAGCTTATGAAATAATACACACTATCAGGTATCAATAAATTTTAGTCTATC
AATCTATCAAAAAAAAATCT

Downstream 100 bases:

>100_bases
CGGTAATTAAAAGATATCAAGTTGTTTCTATGACTCTGACAGAATAAATAGATTCTCAAGCATATAATTGATAAATAATT
AGATAGGAATATGATTAATA

Product: serine phosphatase

Products: NA

Alternate protein names: Sigma factor sigB regulation protein rsbU [H]

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MNVLPVYGNSPEPSDHIATENSSPVTSASAIQKMVARLNKEQQNVNDLLSSLGFALRSFNNLNQFLELIPLMGCRVTDAD
GGALVLFKPNGQVRFQQLHCQEGQKCQDIRKALEIATRQLIAETTLLAELQEVSIQAASLDYQVSNYLGNDVQLFGTSIL
VKNSERGRLYVFSHDPEYAWTPTRQKLIRLVADQTAVAIANDELSSSLREKERLDREVEIGAEIQLQLLPPKCPEIPGVT
LAARCKTANRVGGDYYDFIPSNYDQVNSKQKKQDSCKWSIVIGDVMGKGVPAGLIMTMTRGMLRAEVLNRHSPARVLQHL
NQVMYADLENSHRFVTLFYSEYDPETTILSYSNAAHHPPMLWQAASNSIVNLDTLGMLIGLEVDSEYNEAQVKLHPGDTI
IYYTDGFTDAANKHGDRYDDIKLSQAFKFACQNYQEPQEILDYLFEQVDQFVGVENNNPDDMTLVVMRVKLNEK

Sequences:

>Translated_474_residues
MNVLPVYGNSPEPSDHIATENSSPVTSASAIQKMVARLNKEQQNVNDLLSSLGFALRSFNNLNQFLELIPLMGCRVTDAD
GGALVLFKPNGQVRFQQLHCQEGQKCQDIRKALEIATRQLIAETTLLAELQEVSIQAASLDYQVSNYLGNDVQLFGTSIL
VKNSERGRLYVFSHDPEYAWTPTRQKLIRLVADQTAVAIANDELSSSLREKERLDREVEIGAEIQLQLLPPKCPEIPGVT
LAARCKTANRVGGDYYDFIPSNYDQVNSKQKKQDSCKWSIVIGDVMGKGVPAGLIMTMTRGMLRAEVLNRHSPARVLQHL
NQVMYADLENSHRFVTLFYSEYDPETTILSYSNAAHHPPMLWQAASNSIVNLDTLGMLIGLEVDSEYNEAQVKLHPGDTI
IYYTDGFTDAANKHGDRYDDIKLSQAFKFACQNYQEPQEILDYLFEQVDQFVGVENNNPDDMTLVVMRVKLNEK
>Mature_474_residues
MNVLPVYGNSPEPSDHIATENSSPVTSASAIQKMVARLNKEQQNVNDLLSSLGFALRSFNNLNQFLELIPLMGCRVTDAD
GGALVLFKPNGQVRFQQLHCQEGQKCQDIRKALEIATRQLIAETTLLAELQEVSIQAASLDYQVSNYLGNDVQLFGTSIL
VKNSERGRLYVFSHDPEYAWTPTRQKLIRLVADQTAVAIANDELSSSLREKERLDREVEIGAEIQLQLLPPKCPEIPGVT
LAARCKTANRVGGDYYDFIPSNYDQVNSKQKKQDSCKWSIVIGDVMGKGVPAGLIMTMTRGMLRAEVLNRHSPARVLQHL
NQVMYADLENSHRFVTLFYSEYDPETTILSYSNAAHHPPMLWQAASNSIVNLDTLGMLIGLEVDSEYNEAQVKLHPGDTI
IYYTDGFTDAANKHGDRYDDIKLSQAFKFACQNYQEPQEILDYLFEQVDQFVGVENNNPDDMTLVVMRVKLNEK

Specific function: Positive regulator of sigma-B activity. Dephosphorylates rsbV in response to environmental stress conveyed from the rsbXST module [H]

COG id: COG2208

COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PP2C-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017944
- InterPro:   IPR001932
- InterPro:   IPR014787
- InterPro:   IPR010822
- ProDom:   PD685490 [H]

Pfam domain/function: PF08673 RsbU_N; PF07228 SpoIIE [H]

EC number: =3.1.3.3 [H]

Molecular weight: Translated: 53201; Mature: 53201

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVLPVYGNSPEPSDHIATENSSPVTSASAIQKMVARLNKEQQNVNDLLSSLGFALRSFN
CCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
NLNQFLELIPLMGCRVTDADGGALVLFKPNGQVRFQQLHCQEGQKCQDIRKALEIATRQL
HHHHHHHHHHHCCCEEECCCCCEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH
IAETTLLAELQEVSIQAASLDYQVSNYLGNDVQLFGTSILVKNSERGRLYVFSHDPEYAW
HHHHHHHHHHHHHHHHHHHCCEEHHHHCCCCEEEEEEEEEEECCCCCEEEEEECCCCCCC
TPTRQKLIRLVADQTAVAIANDELSSSLREKERLDREVEIGAEIQLQLLPPKCPEIPGVT
CHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHCCCCEECCCEEEEEECCCCCCCCCCCE
LAARCKTANRVGGDYYDFIPSNYDQVNSKQKKQDSCKWSIVIGDVMGKGVPAGLIMTMTR
EEECCCHHHHCCCCHHHCCCCCHHHHCCHHHHCCCCEEEEEEECHHCCCCCHHHHHHHHH
GMLRAEVLNRHSPARVLQHLNQVMYADLENSHRFVTLFYSEYDPETTILSYSNAAHHPPM
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCE
LWQAASNSIVNLDTLGMLIGLEVDSEYNEAQVKLHPGDTIIYYTDGFTDAANKHGDRYDD
EEHHCCCCEEEHHHHEEEEEEEECCCCCCEEEEECCCCEEEEEECCCCCHHHCCCCCCCC
IKLSQAFKFACQNYQEPQEILDYLFEQVDQFVGVENNNPDDMTLVVMRVKLNEK
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCC
>Mature Secondary Structure
MNVLPVYGNSPEPSDHIATENSSPVTSASAIQKMVARLNKEQQNVNDLLSSLGFALRSFN
CCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
NLNQFLELIPLMGCRVTDADGGALVLFKPNGQVRFQQLHCQEGQKCQDIRKALEIATRQL
HHHHHHHHHHHCCCEEECCCCCEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH
IAETTLLAELQEVSIQAASLDYQVSNYLGNDVQLFGTSILVKNSERGRLYVFSHDPEYAW
HHHHHHHHHHHHHHHHHHHCCEEHHHHCCCCEEEEEEEEEEECCCCCEEEEEECCCCCCC
TPTRQKLIRLVADQTAVAIANDELSSSLREKERLDREVEIGAEIQLQLLPPKCPEIPGVT
CHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHCCCCEECCCEEEEEECCCCCCCCCCCE
LAARCKTANRVGGDYYDFIPSNYDQVNSKQKKQDSCKWSIVIGDVMGKGVPAGLIMTMTR
EEECCCHHHHCCCCHHHCCCCCHHHHCCHHHHCCCCEEEEEEECHHCCCCCHHHHHHHHH
GMLRAEVLNRHSPARVLQHLNQVMYADLENSHRFVTLFYSEYDPETTILSYSNAAHHPPM
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCE
LWQAASNSIVNLDTLGMLIGLEVDSEYNEAQVKLHPGDTIIYYTDGFTDAANKHGDRYDD
EEHHCCCCEEEHHHHEEEEEEEECCCCCCEEEEECCCCEEEEEECCCCCHHHCCCCCCCC
IKLSQAFKFACQNYQEPQEILDYLFEQVDQFVGVENNNPDDMTLVVMRVKLNEK
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8002610; 8002609; 9384377; 8824586; 9786195; 12499568 [H]