Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474575

Identifier: 113474575

GI number: 113474575

Start: 1183022

End: 1183411

Strand: Direct

Name: 113474575

Synonym: Tery_0732

Alternate gene names: NA

Gene position: 1183022-1183411 (Clockwise)

Preceding gene: 113474573

Following gene: 113474577

Centisome position: 15.26

GC content: 39.74

Gene sequence:

>390_bases
ATGGAATATCTTTACTTTTTAGGAAATACTAGTCTGTGCCTCAGAGTAGTTGAATACTTAGACAATGCCCATCATTTACA
GCTTCGTTTTATGACAGTAATTCATCAAATTGATGGCTGGGTCGTAAAACTTAAAATGAGCAAATACTTGACTCCTCAAA
AACACGGAGACTTTAGGGCTTTTATGAATGAATTGGGAATACCTTATGATCCTGATATCCGTGTCAGAATGGCACTATGG
GGCTTGGAAACTGGACAATCACCCTTAAGTGTGATGAGACGTTATCAGGTAGCAGTGGTTTCCCATGGAGAGCCCAATCA
AGATGATATAGAAGCATTTAGAACCCAATTTGTCAGGGGTTTGGGATATTGCCCAGAAACTTTGGGTTAG

Upstream 100 bases:

>100_bases
AACTTTTCCCACTACCTTTAATATTTCCTCTGTAGTAGAAAATAAAACTTAGAGGTTAAATCAGGGTAAAAGGGACAGTT
ATAAGCGGTAATAGTTTGAT

Downstream 100 bases:

>100_bases
TCTTGCTGGAATCTGACTCTAATTTATTTGAATTTGTTTGTACCTATACATCTATAAAAAATATATTGTTAATATTAGTA
TGGGTACAACAAAAAATAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MEYLYFLGNTSLCLRVVEYLDNAHHLQLRFMTVIHQIDGWVVKLKMSKYLTPQKHGDFRAFMNELGIPYDPDIRVRMALW
GLETGQSPLSVMRRYQVAVVSHGEPNQDDIEAFRTQFVRGLGYCPETLG

Sequences:

>Translated_129_residues
MEYLYFLGNTSLCLRVVEYLDNAHHLQLRFMTVIHQIDGWVVKLKMSKYLTPQKHGDFRAFMNELGIPYDPDIRVRMALW
GLETGQSPLSVMRRYQVAVVSHGEPNQDDIEAFRTQFVRGLGYCPETLG
>Mature_129_residues
MEYLYFLGNTSLCLRVVEYLDNAHHLQLRFMTVIHQIDGWVVKLKMSKYLTPQKHGDFRAFMNELGIPYDPDIRVRMALW
GLETGQSPLSVMRRYQVAVVSHGEPNQDDIEAFRTQFVRGLGYCPETLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14981; Mature: 14981

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYLYFLGNTSLCLRVVEYLDNAHHLQLRFMTVIHQIDGWVVKLKMSKYLTPQKHGDFRA
CCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEEHHHCCCCCCCCCHHH
FMNELGIPYDPDIRVRMALWGLETGQSPLSVMRRYQVAVVSHGEPNQDDIEAFRTQFVRG
HHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHH
LGYCPETLG
CCCCCCCCC
>Mature Secondary Structure
MEYLYFLGNTSLCLRVVEYLDNAHHLQLRFMTVIHQIDGWVVKLKMSKYLTPQKHGDFRA
CCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEEHHHCCCCCCCCCHHH
FMNELGIPYDPDIRVRMALWGLETGQSPLSVMRRYQVAVVSHGEPNQDDIEAFRTQFVRG
HHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHH
LGYCPETLG
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA