Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is terE [H]

Identifier: 113474553

GI number: 113474553

Start: 1143474

End: 1144046

Strand: Direct

Name: terE [H]

Synonym: Tery_0707

Alternate gene names: 113474553

Gene position: 1143474-1144046 (Clockwise)

Preceding gene: 113474552

Following gene: 113474556

Centisome position: 14.75

GC content: 32.64

Gene sequence:

>573_bases
ATGTCTATTAATCTCAGCAAAGGTGAAAGACTAAATCTTTCCAAAGAATCTCCTAATTTAACACAAGCTGGTATTGGGTT
AGGATGGGATATTAATACTACAGATACAGGTTCTGAATTTGATTTAGATGCTTCTGTATTTATGTTAGGAGCTAATGCAA
AAATTCCTTCAGAAAAATACTTTGTTTTCTACAATAATTTAACATCACCAGATGGTTCTGTTAAACATTCAGGAGATAGT
AGAACAGGAGAAGGTTCTGGAGATGATGAACTAATAGAAATAGATTTAAAAAAAGTAGATCAAGAAATTCAAGAAATAGT
GTTTGTCGTAACTATTCATGAAGCGGATGCTCGAAGACAAAACTTTGGACAAGTCAGAAATTCTTTTATTAGAATTTGTA
ATATTACTACTGGAGAAGAAGTAACTAAATATGAATTAGAGGAAGATTTTTCCCGAGAAACTGCCCTAGAATTTGGGAGA
CTTTATCGCAAAGATAATGACTGGAGATTCCAAGCTGTTGGACAAGGTTATAATTCTGGCTTACAAGGGTTTATTGATAA
GTATGTTTCTTAG

Upstream 100 bases:

>100_bases
ATATTACAATTAAAATAGGATTGCTATCTTAATAATTGTTAACTAATAACTTATAAACTGGGATAGGATTGCTATATTAA
TAACCGATAAGAGGTAAATT

Downstream 100 bases:

>100_bases
CTTAAGATTGTAGAGAAATAATGGTAATATTAACCCATAATTTTTTCTTAGGTATTGACTAGATAATTCTAGTTCTTATA
AAGCATAATTCCCATTGATA

Product: stress protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MSINLSKGERLNLSKESPNLTQAGIGLGWDINTTDTGSEFDLDASVFMLGANAKIPSEKYFVFYNNLTSPDGSVKHSGDS
RTGEGSGDDELIEIDLKKVDQEIQEIVFVVTIHEADARRQNFGQVRNSFIRICNITTGEEVTKYELEEDFSRETALEFGR
LYRKDNDWRFQAVGQGYNSGLQGFIDKYVS

Sequences:

>Translated_190_residues
MSINLSKGERLNLSKESPNLTQAGIGLGWDINTTDTGSEFDLDASVFMLGANAKIPSEKYFVFYNNLTSPDGSVKHSGDS
RTGEGSGDDELIEIDLKKVDQEIQEIVFVVTIHEADARRQNFGQVRNSFIRICNITTGEEVTKYELEEDFSRETALEFGR
LYRKDNDWRFQAVGQGYNSGLQGFIDKYVS
>Mature_189_residues
SINLSKGERLNLSKESPNLTQAGIGLGWDINTTDTGSEFDLDASVFMLGANAKIPSEKYFVFYNNLTSPDGSVKHSGDSR
TGEGSGDDELIEIDLKKVDQEIQEIVFVVTIHEADARRQNFGQVRNSFIRICNITTGEEVTKYELEEDFSRETALEFGRL
YRKDNDWRFQAVGQGYNSGLQGFIDKYVS

Specific function: Not known; seems to contribute to the tellurium resistance (Ter) mechanism [H]

COG id: COG2310

COG function: function code T; Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CAPAB/TerDEXZ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003325 [H]

Pfam domain/function: PF02342 TerD [H]

EC number: NA

Molecular weight: Translated: 21326; Mature: 21195

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSINLSKGERLNLSKESPNLTQAGIGLGWDINTTDTGSEFDLDASVFMLGANAKIPSEKY
CCCCCCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEE
FVFYNNLTSPDGSVKHSGDSRTGEGSGDDELIEIDLKKVDQEIQEIVFVVTIHEADARRQ
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHEEEEEEEECCHHHHH
NFGQVRNSFIRICNITTGEEVTKYELEEDFSRETALEFGRLYRKDNDWRFQAVGQGYNSG
HHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCH
LQGFIDKYVS
HHHHHHHHCC
>Mature Secondary Structure 
SINLSKGERLNLSKESPNLTQAGIGLGWDINTTDTGSEFDLDASVFMLGANAKIPSEKY
CCCCCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEE
FVFYNNLTSPDGSVKHSGDSRTGEGSGDDELIEIDLKKVDQEIQEIVFVVTIHEADARRQ
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHEEEEEEEECCHHHHH
NFGQVRNSFIRICNITTGEEVTKYELEEDFSRETALEFGRLYRKDNDWRFQAVGQGYNSG
HHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCH
LQGFIDKYVS
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3049247 [H]