| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474518
Identifier: 113474518
GI number: 113474518
Start: 1096877
End: 1097611
Strand: Direct
Name: 113474518
Synonym: Tery_0667
Alternate gene names: NA
Gene position: 1096877-1097611 (Clockwise)
Preceding gene: 113474516
Following gene: 113474521
Centisome position: 14.15
GC content: 42.18
Gene sequence:
>735_bases ATGTACATCCTGTTATTATTAAATGCTATCCTTTTCAGCTTTCTTATAGTGTCTATCATCAGCACATTTCCCAATATTTG GCTCCAAGTTTTCCTCGTCGGTGGATGGTTAGGAATTATTTTAATCTTTGCCGAAGCACTGAACCGTTTTGCCAAAGTCG ACCCAGAGATATCGCGAAAAGTCGTTCATATTGGCACAGGTAATGTAATTCTATTTGCTTGGTGGCTAGAAATTCCCCCC TGGATAGGCATTACTGCCGGAATTATCTCAGCAGCGATCGCCCTTATTTCCTACCGACTTCCCATCCTTCCCAGCGTTAA CAGTGTAGGGCGCAAAAGCCTAGGAACATTTTTCTACGCAGTTAGTATTGGTATTCTCATCGGTTGGTTTTGGTCTATTC AACAACCTCAATATGCCGCCATAGGAATATTAACCATGGCTTGGGGTGATGGGTTCGCAGCTATCATTGGTCAAAACTTT GGCAAACATCCCTATCAAGTCTGGGGAATGAACAAAAGTTGGGAAGGCTCCCTAGGAATGTGTTTAGTTAGCTATACCGT TTGTAGTCTAATTTTATTAGCAGTGCAAGGCAACATTTGGCAAACCTGGATAGTTGCTATTCCAGTCGCCTTAGCTGCTA CTGCTTTAGAGACCCTATCAAAAGTAGGTCTGGATAATTTGACCGTACCATTAGGTAGTGCTGCCCTTTGCTTTTTCCTC AATCAATTTTTTTAA
Upstream 100 bases:
>100_bases AGAGATTAGTATAGTATATTATTCAAACATAATAATTCTATTGTATTAAGGACTTACAGTAAAGAAACCAGGAAAAAAAC CTAGTTTCTGAAGTGCTCCT
Downstream 100 bases:
>100_bases CTAGAATAGAGCCAAGACACCTTCCCGACCTCGCTCCAGGAAACAGCAGAGAACTCCTATGCATTAATCAAATAAACTCA CATCAAATTTCATCCATTAA
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: Dolichol Kinase; Integral Membrane Protein; Phosphatidate Cytidylyltransferase Family Protein
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MYILLLLNAILFSFLIVSIISTFPNIWLQVFLVGGWLGIILIFAEALNRFAKVDPEISRKVVHIGTGNVILFAWWLEIPP WIGITAGIISAAIALISYRLPILPSVNSVGRKSLGTFFYAVSIGILIGWFWSIQQPQYAAIGILTMAWGDGFAAIIGQNF GKHPYQVWGMNKSWEGSLGMCLVSYTVCSLILLAVQGNIWQTWIVAIPVALAATALETLSKVGLDNLTVPLGSAALCFFL NQFF
Sequences:
>Translated_244_residues MYILLLLNAILFSFLIVSIISTFPNIWLQVFLVGGWLGIILIFAEALNRFAKVDPEISRKVVHIGTGNVILFAWWLEIPP WIGITAGIISAAIALISYRLPILPSVNSVGRKSLGTFFYAVSIGILIGWFWSIQQPQYAAIGILTMAWGDGFAAIIGQNF GKHPYQVWGMNKSWEGSLGMCLVSYTVCSLILLAVQGNIWQTWIVAIPVALAATALETLSKVGLDNLTVPLGSAALCFFL NQFF >Mature_244_residues MYILLLLNAILFSFLIVSIISTFPNIWLQVFLVGGWLGIILIFAEALNRFAKVDPEISRKVVHIGTGNVILFAWWLEIPP WIGITAGIISAAIALISYRLPILPSVNSVGRKSLGTFFYAVSIGILIGWFWSIQQPQYAAIGILTMAWGDGFAAIIGQNF GKHPYQVWGMNKSWEGSLGMCLVSYTVCSLILLAVQGNIWQTWIVAIPVALAATALETLSKVGLDNLTVPLGSAALCFFL NQFF
Specific function: Unknown
COG id: COG0170
COG function: function code I; Dolichol kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26753; Mature: 26753
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYILLLLNAILFSFLIVSIISTFPNIWLQVFLVGGWLGIILIFAEALNRFAKVDPEISRK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCE VVHIGTGNVILFAWWLEIPPWIGITAGIISAAIALISYRLPILPSVNSVGRKSLGTFFYA EEEECCCCEEEEEEEHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH VSIGILIGWFWSIQQPQYAAIGILTMAWGDGFAAIIGQNFGKHPYQVWGMNKSWEGSLGM HHHHHHHHHHHHCCCCCHHHHEEEEEECCCCHHHHHCCCCCCCCEEEECCCCCCCCCHHH CLVSYTVCSLILLAVQGNIWQTWIVAIPVALAATALETLSKVGLDNLTVPLGSAALCFFL HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH NQFF HHHC >Mature Secondary Structure MYILLLLNAILFSFLIVSIISTFPNIWLQVFLVGGWLGIILIFAEALNRFAKVDPEISRK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCE VVHIGTGNVILFAWWLEIPPWIGITAGIISAAIALISYRLPILPSVNSVGRKSLGTFFYA EEEECCCCEEEEEEEHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH VSIGILIGWFWSIQQPQYAAIGILTMAWGDGFAAIIGQNFGKHPYQVWGMNKSWEGSLGM HHHHHHHHHHHHCCCCCHHHHEEEEEECCCCHHHHHCCCCCCCCEEEECCCCCCCCCHHH CLVSYTVCSLILLAVQGNIWQTWIVAIPVALAATALETLSKVGLDNLTVPLGSAALCFFL HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH NQFF HHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA