Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474518

Identifier: 113474518

GI number: 113474518

Start: 1096877

End: 1097611

Strand: Direct

Name: 113474518

Synonym: Tery_0667

Alternate gene names: NA

Gene position: 1096877-1097611 (Clockwise)

Preceding gene: 113474516

Following gene: 113474521

Centisome position: 14.15

GC content: 42.18

Gene sequence:

>735_bases
ATGTACATCCTGTTATTATTAAATGCTATCCTTTTCAGCTTTCTTATAGTGTCTATCATCAGCACATTTCCCAATATTTG
GCTCCAAGTTTTCCTCGTCGGTGGATGGTTAGGAATTATTTTAATCTTTGCCGAAGCACTGAACCGTTTTGCCAAAGTCG
ACCCAGAGATATCGCGAAAAGTCGTTCATATTGGCACAGGTAATGTAATTCTATTTGCTTGGTGGCTAGAAATTCCCCCC
TGGATAGGCATTACTGCCGGAATTATCTCAGCAGCGATCGCCCTTATTTCCTACCGACTTCCCATCCTTCCCAGCGTTAA
CAGTGTAGGGCGCAAAAGCCTAGGAACATTTTTCTACGCAGTTAGTATTGGTATTCTCATCGGTTGGTTTTGGTCTATTC
AACAACCTCAATATGCCGCCATAGGAATATTAACCATGGCTTGGGGTGATGGGTTCGCAGCTATCATTGGTCAAAACTTT
GGCAAACATCCCTATCAAGTCTGGGGAATGAACAAAAGTTGGGAAGGCTCCCTAGGAATGTGTTTAGTTAGCTATACCGT
TTGTAGTCTAATTTTATTAGCAGTGCAAGGCAACATTTGGCAAACCTGGATAGTTGCTATTCCAGTCGCCTTAGCTGCTA
CTGCTTTAGAGACCCTATCAAAAGTAGGTCTGGATAATTTGACCGTACCATTAGGTAGTGCTGCCCTTTGCTTTTTCCTC
AATCAATTTTTTTAA

Upstream 100 bases:

>100_bases
AGAGATTAGTATAGTATATTATTCAAACATAATAATTCTATTGTATTAAGGACTTACAGTAAAGAAACCAGGAAAAAAAC
CTAGTTTCTGAAGTGCTCCT

Downstream 100 bases:

>100_bases
CTAGAATAGAGCCAAGACACCTTCCCGACCTCGCTCCAGGAAACAGCAGAGAACTCCTATGCATTAATCAAATAAACTCA
CATCAAATTTCATCCATTAA

Product: phosphatidate cytidylyltransferase

Products: NA

Alternate protein names: Dolichol Kinase; Integral Membrane Protein; Phosphatidate Cytidylyltransferase Family Protein

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MYILLLLNAILFSFLIVSIISTFPNIWLQVFLVGGWLGIILIFAEALNRFAKVDPEISRKVVHIGTGNVILFAWWLEIPP
WIGITAGIISAAIALISYRLPILPSVNSVGRKSLGTFFYAVSIGILIGWFWSIQQPQYAAIGILTMAWGDGFAAIIGQNF
GKHPYQVWGMNKSWEGSLGMCLVSYTVCSLILLAVQGNIWQTWIVAIPVALAATALETLSKVGLDNLTVPLGSAALCFFL
NQFF

Sequences:

>Translated_244_residues
MYILLLLNAILFSFLIVSIISTFPNIWLQVFLVGGWLGIILIFAEALNRFAKVDPEISRKVVHIGTGNVILFAWWLEIPP
WIGITAGIISAAIALISYRLPILPSVNSVGRKSLGTFFYAVSIGILIGWFWSIQQPQYAAIGILTMAWGDGFAAIIGQNF
GKHPYQVWGMNKSWEGSLGMCLVSYTVCSLILLAVQGNIWQTWIVAIPVALAATALETLSKVGLDNLTVPLGSAALCFFL
NQFF
>Mature_244_residues
MYILLLLNAILFSFLIVSIISTFPNIWLQVFLVGGWLGIILIFAEALNRFAKVDPEISRKVVHIGTGNVILFAWWLEIPP
WIGITAGIISAAIALISYRLPILPSVNSVGRKSLGTFFYAVSIGILIGWFWSIQQPQYAAIGILTMAWGDGFAAIIGQNF
GKHPYQVWGMNKSWEGSLGMCLVSYTVCSLILLAVQGNIWQTWIVAIPVALAATALETLSKVGLDNLTVPLGSAALCFFL
NQFF

Specific function: Unknown

COG id: COG0170

COG function: function code I; Dolichol kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26753; Mature: 26753

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYILLLLNAILFSFLIVSIISTFPNIWLQVFLVGGWLGIILIFAEALNRFAKVDPEISRK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCE
VVHIGTGNVILFAWWLEIPPWIGITAGIISAAIALISYRLPILPSVNSVGRKSLGTFFYA
EEEECCCCEEEEEEEHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
VSIGILIGWFWSIQQPQYAAIGILTMAWGDGFAAIIGQNFGKHPYQVWGMNKSWEGSLGM
HHHHHHHHHHHHCCCCCHHHHEEEEEECCCCHHHHHCCCCCCCCEEEECCCCCCCCCHHH
CLVSYTVCSLILLAVQGNIWQTWIVAIPVALAATALETLSKVGLDNLTVPLGSAALCFFL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
NQFF
HHHC
>Mature Secondary Structure
MYILLLLNAILFSFLIVSIISTFPNIWLQVFLVGGWLGIILIFAEALNRFAKVDPEISRK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCE
VVHIGTGNVILFAWWLEIPPWIGITAGIISAAIALISYRLPILPSVNSVGRKSLGTFFYA
EEEECCCCEEEEEEEHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
VSIGILIGWFWSIQQPQYAAIGILTMAWGDGFAAIIGQNFGKHPYQVWGMNKSWEGSLGM
HHHHHHHHHHHHCCCCCHHHHEEEEEECCCCHHHHHCCCCCCCCEEEECCCCCCCCCHHH
CLVSYTVCSLILLAVQGNIWQTWIVAIPVALAATALETLSKVGLDNLTVPLGSAALCFFL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
NQFF
HHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA