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The map label for this gene is recJ [H]

Identifier: 113474473

GI number: 113474473

Start: 1002049

End: 1004481

Strand: Direct

Name: recJ [H]

Synonym: Tery_0618

Alternate gene names: 113474473

Gene position: 1002049-1004481 (Clockwise)

Preceding gene: 113474472

Following gene: 113474474

Centisome position: 12.93

GC content: 34.07

Gene sequence:

>2433_bases
ATGTCTCAAGAAAAAAAATATTGGCAAATCCTGAGTTCCAATCATCCACCTTATTCATTTATTGAATCTTTCAAAAGCTA
TGTACCAGAATTATCGGGAAAATATCTAGCACAATTATTATGGCAACGTGGAATTAAAAATCCTGAAGATATAGCATCAT
TTTTAGATCCGAAACAATATAAACCAGCTAGTTTTTCAGCATTTGGCTCAGAAATTAATAATGCCGTAGCAAGAATTATT
TCTGCTAGAAATAATCAAGAAAAAGTTGCTATCTGGGGAGATTTTGATGCAGATGGGATTACGTCAACATCTGTACTATG
GGATGGATTAGGAGAATTTTTAGATAAAATAGACCAACTAACTTATTATATTCCTAATAGGTTTACAGAATCTCATGGTT
TGAATTTTTCTGGAATAGAAAGGTTAGCTAAAAAAAATTATAGTTTGATAATTACCTGCGATACAGGTAGTACAAATATT
GCCGAAATAGAATATGCAAATAGTTTAGGTATAGATATAATTGTTACTGATCATCATACTATTCCCACAAAACGCCCACC
GTTATTTGCTATTATTAATCCTCGCTATTTTTCTCAAGATCATCCCCTATATAATTTATCTGGAGTTGGAGTAGCTTATA
AGCTTATAGAGGCACTTTATTTAACTCATCCGGAAATACCTCAACTTCCCCTAACAGAATTATTAGATTTAGTAGCTATT
GGTTTAATTGCAGATCTAGTTGAACTAAGAGATGACTGTCGTTATTTAGCACAAATAGGTATTGAAAAATTAAGGACACA
ATTACACAAAACTACCAGGCCAGGAGTTGCTAAACTTTTAGAATTGTGCCAAAAAACAGGCGATCGCCCTACAGATATTT
CTTTTGGTATTGGCCCTCGAATTAATGCTGTAAGTAGAATTATGGGAGAGGCCAGTTTTTGTGTGGAACTATTGACAAGT
CGTAACCCTCAACATTGTCAAAAACTAGCGTTACAAACAGAGTTGGCTAACTCTAGGCGCAAGTCTCTAGAAAAAGAAGT
AGCTAAAGATATTGCCCAAAAATTGACAAAACTAGACCTTTCTACGACTCATGTCATAGTTCTGAGTGATCCTCAATGGC
CTGTTGGTGTGCTAGGATTAGTGGCAGGCCAAATAGCTCAAAAGTATGGTCGTCCTACTATTTTATTTAGTGAGGAAACT
GAAGTTACTAAAACTTCTGAAAAAAAATTATTAGCTCGCGGTTCTGCCCGTTCTGTTGGTAATATAAATCTTTATGAGTT
GGTGAAAAATCAAGCACATTTGTTACATAATTTTGGCGGTCATCCTTTTGCTGCTGGTCTGAGTTTACCAGTAGAAAATA
TTTCAATATTTACAGATGCTATTAATCAGTTATTGGGAGAAATATTAGGGGTCACTTTTAACCAAACCTCAGTAATAGAA
GTAGATTTAATTATCACTGTATCTGAGTTAGGTAGAGATTTATTTCAAGAACTAAAGCTTTTGGAACCCTGTGGTATGGG
AAACCCGGTGCCTAAACTTTTAATTCAAAATTGTTGGTTTACTGATATTTGGCATCAGAACCAAACAGACATGGAGGGAA
ATAAAGTCAGATATATTAAAACAAATTTTGAAATTTGCGATAAGTCTATAGATAAAGGGTTTCCTGGTATTTGGTGGGGT
CATTATAAGGAAGAAATTCCTGAAGAAATATGTGATGCTGTTCTAGAATTAGATTTCAATGCTAAAAAAAAATGTTATGA
AGCTCGACTTATTGCTGTACAACCCAATTCCCAAGATAGTCAAGTCGTAGCATCGAACACCGTAAATTGGATATTAGACT
GGCGCAATAATAGTCAACCTCTTTTTGAAAATAAAAACTCAAAGTTCCTAAATAAAAATTATAGTGACACGAATGAATCT
AAGTTATCCCTTCGCGAAAATGAAAAAGACTTAATTGTTCTTACCCAATGTCCCACAAACTGGAATGATTTACGCATCTG
GTTCCGACGAGCAATAAATCAACAAAAAAAACTAGCGATCGCTTACTCCCAACCTTTTATTACCCACCCTCTACAAATCT
GGCAACAACTTCTGGGAATTGCCAAATATCTTAGCCGTACAGGTCAACCTGTAACTCCTGATCAATTGGTAAAAAAGTTA
AGTATTAGTGATACTACTCTTAAATTAGGTTTAATAGCATTACAATATTTTGGATTTAATGTCAAGTATAAAGATAAATA
TTTTTACATTATTCAGAGTCAAAGCCAAAATCAAAAATTAGAAACTTTATCCCAAACAGTCCAAAAGTTCCTCGCAGCAG
TATCAGAAGAACAATTTAGGGAAAAATACTTTTGTGAAGTGCCCCTAAAAATAATAGAAGCGATCGCAATTCAAACAATT
TTAGAAGATGCTAATAGTTCTATTCCCTTCTAG

Upstream 100 bases:

>100_bases
TAATTTTACTTTCAACTTACTTTCGGACTAATTCTATATTTATATGGTTAACTATAATGTTTATATTCTATTCATTAGTA
CAATAAATTGCTAAATAAAG

Downstream 100 bases:

>100_bases
TTGCTCTACAATAATTAAAGTTGTGACACAAAATCGCTACTAATTATGCTCATTTGTCCCCAATGTGAGTTGGAAAATCC
TGATAATCATAGATATTGTC

Product: exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 810; Mature: 809

Protein sequence:

>810_residues
MSQEKKYWQILSSNHPPYSFIESFKSYVPELSGKYLAQLLWQRGIKNPEDIASFLDPKQYKPASFSAFGSEINNAVARII
SARNNQEKVAIWGDFDADGITSTSVLWDGLGEFLDKIDQLTYYIPNRFTESHGLNFSGIERLAKKNYSLIITCDTGSTNI
AEIEYANSLGIDIIVTDHHTIPTKRPPLFAIINPRYFSQDHPLYNLSGVGVAYKLIEALYLTHPEIPQLPLTELLDLVAI
GLIADLVELRDDCRYLAQIGIEKLRTQLHKTTRPGVAKLLELCQKTGDRPTDISFGIGPRINAVSRIMGEASFCVELLTS
RNPQHCQKLALQTELANSRRKSLEKEVAKDIAQKLTKLDLSTTHVIVLSDPQWPVGVLGLVAGQIAQKYGRPTILFSEET
EVTKTSEKKLLARGSARSVGNINLYELVKNQAHLLHNFGGHPFAAGLSLPVENISIFTDAINQLLGEILGVTFNQTSVIE
VDLIITVSELGRDLFQELKLLEPCGMGNPVPKLLIQNCWFTDIWHQNQTDMEGNKVRYIKTNFEICDKSIDKGFPGIWWG
HYKEEIPEEICDAVLELDFNAKKKCYEARLIAVQPNSQDSQVVASNTVNWILDWRNNSQPLFENKNSKFLNKNYSDTNES
KLSLRENEKDLIVLTQCPTNWNDLRIWFRRAINQQKKLAIAYSQPFITHPLQIWQQLLGIAKYLSRTGQPVTPDQLVKKL
SISDTTLKLGLIALQYFGFNVKYKDKYFYIIQSQSQNQKLETLSQTVQKFLAAVSEEQFREKYFCEVPLKIIEAIAIQTI
LEDANSSIPF

Sequences:

>Translated_810_residues
MSQEKKYWQILSSNHPPYSFIESFKSYVPELSGKYLAQLLWQRGIKNPEDIASFLDPKQYKPASFSAFGSEINNAVARII
SARNNQEKVAIWGDFDADGITSTSVLWDGLGEFLDKIDQLTYYIPNRFTESHGLNFSGIERLAKKNYSLIITCDTGSTNI
AEIEYANSLGIDIIVTDHHTIPTKRPPLFAIINPRYFSQDHPLYNLSGVGVAYKLIEALYLTHPEIPQLPLTELLDLVAI
GLIADLVELRDDCRYLAQIGIEKLRTQLHKTTRPGVAKLLELCQKTGDRPTDISFGIGPRINAVSRIMGEASFCVELLTS
RNPQHCQKLALQTELANSRRKSLEKEVAKDIAQKLTKLDLSTTHVIVLSDPQWPVGVLGLVAGQIAQKYGRPTILFSEET
EVTKTSEKKLLARGSARSVGNINLYELVKNQAHLLHNFGGHPFAAGLSLPVENISIFTDAINQLLGEILGVTFNQTSVIE
VDLIITVSELGRDLFQELKLLEPCGMGNPVPKLLIQNCWFTDIWHQNQTDMEGNKVRYIKTNFEICDKSIDKGFPGIWWG
HYKEEIPEEICDAVLELDFNAKKKCYEARLIAVQPNSQDSQVVASNTVNWILDWRNNSQPLFENKNSKFLNKNYSDTNES
KLSLRENEKDLIVLTQCPTNWNDLRIWFRRAINQQKKLAIAYSQPFITHPLQIWQQLLGIAKYLSRTGQPVTPDQLVKKL
SISDTTLKLGLIALQYFGFNVKYKDKYFYIIQSQSQNQKLETLSQTVQKFLAAVSEEQFREKYFCEVPLKIIEAIAIQTI
LEDANSSIPF
>Mature_809_residues
SQEKKYWQILSSNHPPYSFIESFKSYVPELSGKYLAQLLWQRGIKNPEDIASFLDPKQYKPASFSAFGSEINNAVARIIS
ARNNQEKVAIWGDFDADGITSTSVLWDGLGEFLDKIDQLTYYIPNRFTESHGLNFSGIERLAKKNYSLIITCDTGSTNIA
EIEYANSLGIDIIVTDHHTIPTKRPPLFAIINPRYFSQDHPLYNLSGVGVAYKLIEALYLTHPEIPQLPLTELLDLVAIG
LIADLVELRDDCRYLAQIGIEKLRTQLHKTTRPGVAKLLELCQKTGDRPTDISFGIGPRINAVSRIMGEASFCVELLTSR
NPQHCQKLALQTELANSRRKSLEKEVAKDIAQKLTKLDLSTTHVIVLSDPQWPVGVLGLVAGQIAQKYGRPTILFSEETE
VTKTSEKKLLARGSARSVGNINLYELVKNQAHLLHNFGGHPFAAGLSLPVENISIFTDAINQLLGEILGVTFNQTSVIEV
DLIITVSELGRDLFQELKLLEPCGMGNPVPKLLIQNCWFTDIWHQNQTDMEGNKVRYIKTNFEICDKSIDKGFPGIWWGH
YKEEIPEEICDAVLELDFNAKKKCYEARLIAVQPNSQDSQVVASNTVNWILDWRNNSQPLFENKNSKFLNKNYSDTNESK
LSLRENEKDLIVLTQCPTNWNDLRIWFRRAINQQKKLAIAYSQPFITHPLQIWQQLLGIAKYLSRTGQPVTPDQLVKKLS
ISDTTLKLGLIALQYFGFNVKYKDKYFYIIQSQSQNQKLETLSQTVQKFLAAVSEEQFREKYFCEVPLKIIEAIAIQTIL
EDANSSIPF

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=459, Percent_Identity=30.718954248366, Blast_Score=200, Evalue=3e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 91768; Mature: 91637

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQEKKYWQILSSNHPPYSFIESFKSYVPELSGKYLAQLLWQRGIKNPEDIASFLDPKQY
CCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCC
KPASFSAFGSEINNAVARIISARNNQEKVAIWGDFDADGITSTSVLWDGLGEFLDKIDQL
CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
TYYIPNRFTESHGLNFSGIERLAKKNYSLIITCDTGSTNIAEIEYANSLGIDIIVTDHHT
HHHCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCC
IPTKRPPLFAIINPRYFSQDHPLYNLSGVGVAYKLIEALYLTHPEIPQLPLTELLDLVAI
CCCCCCCEEEEECCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
GLIADLVELRDDCRYLAQIGIEKLRTQLHKTTRPGVAKLLELCQKTGDRPTDISFGIGPR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
INAVSRIMGEASFCVELLTSRNPQHCQKLALQTELANSRRKSLEKEVAKDIAQKLTKLDL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
STTHVIVLSDPQWPVGVLGLVAGQIAQKYGRPTILFSEETEVTKTSEKKLLARGSARSVG
CCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCCCCC
NINLYELVKNQAHLLHNFGGHPFAAGLSLPVENISIFTDAINQLLGEILGVTFNQTSVIE
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
VDLIITVSELGRDLFQELKLLEPCGMGNPVPKLLIQNCWFTDIWHQNQTDMEGNKVRYIK
EEEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHCCCCCCCCCCCEEEEEE
TNFEICDKSIDKGFPGIWWGHYKEEIPEEICDAVLELDFNAKKKCYEARLIAVQPNSQDS
CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEECCCCCCC
QVVASNTVNWILDWRNNSQPLFENKNSKFLNKNYSDTNESKLSLRENEKDLIVLTQCPTN
CEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCC
WNDLRIWFRRAINQQKKLAIAYSQPFITHPLQIWQQLLGIAKYLSRTGQPVTPDQLVKKL
HHHHHHHHHHHHCHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
SISDTTLKLGLIALQYFGFNVKYKDKYFYIIQSQSQNQKLETLSQTVQKFLAAVSEEQFR
CCCCHHHHHHHHHHHHHCCCEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
EKYFCEVPLKIIEAIAIQTILEDANSSIPF
HHHHHHCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SQEKKYWQILSSNHPPYSFIESFKSYVPELSGKYLAQLLWQRGIKNPEDIASFLDPKQY
CCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCC
KPASFSAFGSEINNAVARIISARNNQEKVAIWGDFDADGITSTSVLWDGLGEFLDKIDQL
CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
TYYIPNRFTESHGLNFSGIERLAKKNYSLIITCDTGSTNIAEIEYANSLGIDIIVTDHHT
HHHCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCC
IPTKRPPLFAIINPRYFSQDHPLYNLSGVGVAYKLIEALYLTHPEIPQLPLTELLDLVAI
CCCCCCCEEEEECCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
GLIADLVELRDDCRYLAQIGIEKLRTQLHKTTRPGVAKLLELCQKTGDRPTDISFGIGPR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
INAVSRIMGEASFCVELLTSRNPQHCQKLALQTELANSRRKSLEKEVAKDIAQKLTKLDL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
STTHVIVLSDPQWPVGVLGLVAGQIAQKYGRPTILFSEETEVTKTSEKKLLARGSARSVG
CCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCCCCC
NINLYELVKNQAHLLHNFGGHPFAAGLSLPVENISIFTDAINQLLGEILGVTFNQTSVIE
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
VDLIITVSELGRDLFQELKLLEPCGMGNPVPKLLIQNCWFTDIWHQNQTDMEGNKVRYIK
EEEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHCCCCCCCCCCCEEEEEE
TNFEICDKSIDKGFPGIWWGHYKEEIPEEICDAVLELDFNAKKKCYEARLIAVQPNSQDS
CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEECCCCCCC
QVVASNTVNWILDWRNNSQPLFENKNSKFLNKNYSDTNESKLSLRENEKDLIVLTQCPTN
CEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCC
WNDLRIWFRRAINQQKKLAIAYSQPFITHPLQIWQQLLGIAKYLSRTGQPVTPDQLVKKL
HHHHHHHHHHHHCHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
SISDTTLKLGLIALQYFGFNVKYKDKYFYIIQSQSQNQKLETLSQTVQKFLAAVSEEQFR
CCCCHHHHHHHHHHHHHCCCEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
EKYFCEVPLKIIEAIAIQTILEDANSSIPF
HHHHHHCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]