| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474456
Identifier: 113474456
GI number: 113474456
Start: 966890
End: 968791
Strand: Direct
Name: 113474456
Synonym: Tery_0600
Alternate gene names: NA
Gene position: 966890-968791 (Clockwise)
Preceding gene: 113474455
Following gene: 113474457
Centisome position: 12.48
GC content: 41.32
Gene sequence:
>1902_bases ATGAATTACGAAACAGAAAATTACGATCAAGATCAAGGTAGTCAAAACTATCAATATCAAAGTAGTGAAAACTATCAAGA TCAAGGCAGTGACAACTATCAAACAAAGACAGTCAAAGAAAATCCAGTTGCCAAAAATGTGGCTAAAAAGGGTAGGCTTC GTGGTTTAACACAAGCCGATGTGGACAGAAAAGCTGGAAAGGCTAAACGCCGTAAAGATATGTCAAAAAAAATTGGTGGT TATGAAGAAAAGGATGCTGAAAGGCGAGGTGAGTTGAAAAAGGATTATGAAAACAATACAGATCAGATAAAGAAAAACGA AGCTGAACGTCAACAAATTGCTGAGGAAGACGCAATCAAACGTCAGGCTGACACGGAAAATAGGCGCAACAAAGTAGCAG CAGATCTGAAGGAAACCAACGAGGTACGTCTAGAAAATTCTGCTGAATGGGACAGCACGCGTCAAGCTGAATATGCTGCA CTAGTTCAAGCTGTAGCTGACAAAATTGCTGTTTTCCAAGCAGAGATTCTTCAAACTAAAGCTGACACGAAAGATAGGCA CGACAAAGTAGTAGCAGATATCAAGGAAACCAACGAGGTACGTCTAGAAAATTCTGCTGAATGGGACAAGACACGTCAAG CTGAATATGCTGCACTAGTTCAAGCTGTAGCTGACAAAATTGCTGTTTTCCAAGCAGAGATTCTTCAAACTAAAGCTGAC ACGAAAGATAGGCACGACAAAGTAGTAGCAGATATCAAGGAAACCAACGAGGTACGTCTAGAAAATTCTGCTGAATGGGA CAAGACACGTCAAGCTGAATATGCTGCACTAGTTCAAGCTGTAGCTGACAAAATTGCTGTTTTCCAAGCAGAGATTCTTC AAACTAAAGCTGACACGAAAGATAGGCACGACAAAGTAGTAGCAGATATCAAGGAAACCAACGAGGTACGTCTAGAAAAT TCTGCTGAATGGGACAGCACGCGTCAAGCTGAATATGCTGCACTAGTTCAAGCTGTAGCTGACAAAATTGCTGCTTTCCA AGCAGAGATTCTTCAAACTAAAGCTGACACGAAAGATAGGCACGACAAAGTAGTAGCAGATATCAAGGAAACCAACGAGG TACGTCTAGAAAATTCTGCTGAATGGGACAAGACACGTCAAGCTGAATATGCTGCACTAGTTCAAGCTGTAGCTGACAAA ATTGCTGTTTTCCAAGCAGAGATTCTTCAAACTAAAGCTGACACGAAAGATAGGCACGACAAAGTAGTAGCAGATATCAA GGAAACCAACGAGGTACGTCTAGAAAATTCTGCTGAATGGGACAAGACACGTCAAGCTGAATATGCTGCACTAGTTCAAG CTGTAGCTGACAAAATTGCTGCTTTCCAAGCAGAGATTCTTCAAACTAAAGCTGACACGAAAGATAGGCACGACAAAGTA GTAGCAGATATCAAGGAAACCAACGAGGTACGTCTAGAAAATTCTGCTGAATGGGACAAGACACGTCAAGCTGAATATGC TGCACTAGTTCAAACTGTAGCTGACAAAATTGCTGCTTTCCAAGCAGAGATTCTTCAAACTAAAGCTGACACGAAAGATA GGCACGACAAAGTAGTAGCAGATATCAAGGAAACCAACGAGGTACGTCTAGAAAATTCTGCTGAATGGGACAGCACGCGT CAAGCTGAATATGCTGCACTAGTTCAAGCTGTAGCTGACAAAATTGCTGGCTTCAAAGCAGAGATTCTTGAAAGCTTGAA TACAGCTATAGAAAAGGCAACGCAAGAGGAAACTCAACGTAAACAAATTGCAGAAGAAGACAAGCAGGAAAGGGTTGATG CAAATAGTAAACGCCGTAAAGATAGGAATGATCAATTTGTAGATTTCATAGAAGTCTCTTAG
Upstream 100 bases:
>100_bases ACCCATTAAAACATTTTCTTAAAATTATTTAATGATCATTATTTACTTTTTATAGTATAAGATTATAGTATAAGGTTCTA AATCAAAATCATGACAAGCT
Downstream 100 bases:
>100_bases AAGGTTTAGGCCATTCTCTGGGATTTATCGTTAGATGAATAAGTAGTTAATTAAGTAGGTTTGATGCCTACTTAATTAAC ATAGATAATCTGGATTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 633; Mature: 633
Protein sequence:
>633_residues MNYETENYDQDQGSQNYQYQSSENYQDQGSDNYQTKTVKENPVAKNVAKKGRLRGLTQADVDRKAGKAKRRKDMSKKIGG YEEKDAERRGELKKDYENNTDQIKKNEAERQQIAEEDAIKRQADTENRRNKVAADLKETNEVRLENSAEWDSTRQAEYAA LVQAVADKIAVFQAEILQTKADTKDRHDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAVFQAEILQTKAD TKDRHDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAVFQAEILQTKADTKDRHDKVVADIKETNEVRLEN SAEWDSTRQAEYAALVQAVADKIAAFQAEILQTKADTKDRHDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADK IAVFQAEILQTKADTKDRHDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAAFQAEILQTKADTKDRHDKV VADIKETNEVRLENSAEWDKTRQAEYAALVQTVADKIAAFQAEILQTKADTKDRHDKVVADIKETNEVRLENSAEWDSTR QAEYAALVQAVADKIAGFKAEILESLNTAIEKATQEETQRKQIAEEDKQERVDANSKRRKDRNDQFVDFIEVS
Sequences:
>Translated_633_residues MNYETENYDQDQGSQNYQYQSSENYQDQGSDNYQTKTVKENPVAKNVAKKGRLRGLTQADVDRKAGKAKRRKDMSKKIGG YEEKDAERRGELKKDYENNTDQIKKNEAERQQIAEEDAIKRQADTENRRNKVAADLKETNEVRLENSAEWDSTRQAEYAA LVQAVADKIAVFQAEILQTKADTKDRHDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAVFQAEILQTKAD TKDRHDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAVFQAEILQTKADTKDRHDKVVADIKETNEVRLEN SAEWDSTRQAEYAALVQAVADKIAAFQAEILQTKADTKDRHDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADK IAVFQAEILQTKADTKDRHDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAAFQAEILQTKADTKDRHDKV VADIKETNEVRLENSAEWDKTRQAEYAALVQTVADKIAAFQAEILQTKADTKDRHDKVVADIKETNEVRLENSAEWDSTR QAEYAALVQAVADKIAGFKAEILESLNTAIEKATQEETQRKQIAEEDKQERVDANSKRRKDRNDQFVDFIEVS >Mature_633_residues MNYETENYDQDQGSQNYQYQSSENYQDQGSDNYQTKTVKENPVAKNVAKKGRLRGLTQADVDRKAGKAKRRKDMSKKIGG YEEKDAERRGELKKDYENNTDQIKKNEAERQQIAEEDAIKRQADTENRRNKVAADLKETNEVRLENSAEWDSTRQAEYAA LVQAVADKIAVFQAEILQTKADTKDRHDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAVFQAEILQTKAD TKDRHDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAVFQAEILQTKADTKDRHDKVVADIKETNEVRLEN SAEWDSTRQAEYAALVQAVADKIAAFQAEILQTKADTKDRHDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADK IAVFQAEILQTKADTKDRHDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAAFQAEILQTKADTKDRHDKV VADIKETNEVRLENSAEWDKTRQAEYAALVQTVADKIAAFQAEILQTKADTKDRHDKVVADIKETNEVRLENSAEWDSTR QAEYAALVQAVADKIAGFKAEILESLNTAIEKATQEETQRKQIAEEDKQERVDANSKRRKDRNDQFVDFIEVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71991; Mature: 71991
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYETENYDQDQGSQNYQYQSSENYQDQGSDNYQTKTVKENPVAKNVAKKGRLRGLTQAD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHH VDRKAGKAKRRKDMSKKIGGYEEKDAERRGELKKDYENNTDQIKKNEAERQQIAEEDAIK HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHH RQADTENRRNKVAADLKETNEVRLENSAEWDSTRQAEYAALVQAVADKIAVFQAEILQTK HHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADTKDRHDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAVFQAEILQTKAD CCCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TKDRHDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAVFQAEILQTKADTK CCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DRHDKVVADIKETNEVRLENSAEWDSTRQAEYAALVQAVADKIAAFQAEILQTKADTKDR HHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH HDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAVFQAEILQTKADTKDRHD HHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH KVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAAFQAEILQTKADTKDRHDKV HHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH VADIKETNEVRLENSAEWDKTRQAEYAALVQTVADKIAAFQAEILQTKADTKDRHDKVVA HHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH DIKETNEVRLENSAEWDSTRQAEYAALVQAVADKIAGFKAEILESLNTAIEKATQEETQR HHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH KQIAEEDKQERVDANSKRRKDRNDQFVDFIEVS HHHHHHHHHHHCCCHHHHCCCCCCCCCEEEECC >Mature Secondary Structure MNYETENYDQDQGSQNYQYQSSENYQDQGSDNYQTKTVKENPVAKNVAKKGRLRGLTQAD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHH VDRKAGKAKRRKDMSKKIGGYEEKDAERRGELKKDYENNTDQIKKNEAERQQIAEEDAIK HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHH RQADTENRRNKVAADLKETNEVRLENSAEWDSTRQAEYAALVQAVADKIAVFQAEILQTK HHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADTKDRHDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAVFQAEILQTKAD CCCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TKDRHDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAVFQAEILQTKADTK CCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DRHDKVVADIKETNEVRLENSAEWDSTRQAEYAALVQAVADKIAAFQAEILQTKADTKDR HHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH HDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAVFQAEILQTKADTKDRHD HHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH KVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAAFQAEILQTKADTKDRHDKV HHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH VADIKETNEVRLENSAEWDKTRQAEYAALVQTVADKIAAFQAEILQTKADTKDRHDKVVA HHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH DIKETNEVRLENSAEWDSTRQAEYAALVQAVADKIAGFKAEILESLNTAIEKATQEETQR HHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH KQIAEEDKQERVDANSKRRKDRNDQFVDFIEVS HHHHHHHHHHHCCCHHHHCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA