| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is murQ
Identifier: 113474225
GI number: 113474225
Start: 522487
End: 523410
Strand: Reverse
Name: murQ
Synonym: Tery_0340
Alternate gene names: 113474225
Gene position: 523410-522487 (Counterclockwise)
Preceding gene: 113474226
Following gene: 113474223
Centisome position: 6.75
GC content: 39.72
Gene sequence:
>924_bases ATGAAAAATTTACAACAGCGAGGTCATTTGTTAACCGAACAGGTTAACCCAAATAGTCATAATCTCGACCAGTTAAGTTC TTTAGAATTAGTAGACTTGTTTAACCAAGAGGATAAGCAAACTTTGAAAGCGATCGCTTCATCCCGTTTACAACTAGCTC AGGCAGTAGACATGACTACTAAAGCTTTAAGTCAAGGTGGTAAATTGTTTTATGTGGGAGCAGGTACTAGTGGTCGTTTA GGCGTATTAGATGCCGCTGAATGTCCACCAACATTTTGCACGTCTCCAGAGTTGGTACAAGGAATTATTGCTGGAGGTGC AAATGCTTTACTTCGCAGTTCCGAAGATTTGGAGGATAGCTGGGAAGATGGTAATGAGGCGATCGCTTCGCACAATATCA CAAATCTAGACGTAATAGTTGGCATCACTGCAGGTGGTACAACTCCTTATGTTCACGGTGCTTTAGAAGGAGCAAAACAA AGGGCAGCAAAAACAATTTTTATTACTTGTGTGCCTGTAGAACAATTTAGCATCAAGGTAGATGTAGATATTAGGTTGTT GGTTGGTCCGGAACTATTATCAGGTTCAACCCGTCTGAAGGCAGGAACAGTCACAAAAATGGCCTTAAATATCTTATCCA CCGGAGTAATGGTGAGGTTAGGAAAAGTTTATGGTAATCGCATGATTGATGTAGCTATAAAAAATAGTAAGTTACGGGAT CGGGCCTTACGAATTATTGAAGACTTAACCGAGTTAAGTCGGGATGAAGCAGAGGAATTATTGAATAAAAGTGGTGATTC AGTTAAGTTAGCACTTTTGATGCACTGGAGTAACTTAAAAAAAGAAGAAGGGGATAGGGTTTTATCTGAGTATCAAGGTA ATCTTAGAGCAGCCATGAAAAACGTAAGTTTTTCTACTGAGTAG
Upstream 100 bases:
>100_bases AATTAACACGATTTATACCCGAGTTTTAACACAATAATAGTTAAGAGATAAGATTTATGGAGACGCTAATATTTTTTTGT ATAATTTGTCAAGGTTTGAT
Downstream 100 bases:
>100_bases ACTACAAAGTGGGGAAATTCTATGTAATGTCTTAGAGGGGGTGATCATTTTTGAAAAGTTCCCGACAGAAAAACTACTAT ATATTAGTTTCCATAGTATT
Product: N-acetylmuramic acid-6-phosphate etherase
Products: NA
Alternate protein names: MurNAc-6-P etherase; N-acetylmuramic acid 6-phosphate hydrolase; N-acetylmuramic acid 6-phosphate lyase
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MKNLQQRGHLLTEQVNPNSHNLDQLSSLELVDLFNQEDKQTLKAIASSRLQLAQAVDMTTKALSQGGKLFYVGAGTSGRL GVLDAAECPPTFCTSPELVQGIIAGGANALLRSSEDLEDSWEDGNEAIASHNITNLDVIVGITAGGTTPYVHGALEGAKQ RAAKTIFITCVPVEQFSIKVDVDIRLLVGPELLSGSTRLKAGTVTKMALNILSTGVMVRLGKVYGNRMIDVAIKNSKLRD RALRIIEDLTELSRDEAEELLNKSGDSVKLALLMHWSNLKKEEGDRVLSEYQGNLRAAMKNVSFSTE
Sequences:
>Translated_307_residues MKNLQQRGHLLTEQVNPNSHNLDQLSSLELVDLFNQEDKQTLKAIASSRLQLAQAVDMTTKALSQGGKLFYVGAGTSGRL GVLDAAECPPTFCTSPELVQGIIAGGANALLRSSEDLEDSWEDGNEAIASHNITNLDVIVGITAGGTTPYVHGALEGAKQ RAAKTIFITCVPVEQFSIKVDVDIRLLVGPELLSGSTRLKAGTVTKMALNILSTGVMVRLGKVYGNRMIDVAIKNSKLRD RALRIIEDLTELSRDEAEELLNKSGDSVKLALLMHWSNLKKEEGDRVLSEYQGNLRAAMKNVSFSTE >Mature_307_residues MKNLQQRGHLLTEQVNPNSHNLDQLSSLELVDLFNQEDKQTLKAIASSRLQLAQAVDMTTKALSQGGKLFYVGAGTSGRL GVLDAAECPPTFCTSPELVQGIIAGGANALLRSSEDLEDSWEDGNEAIASHNITNLDVIVGITAGGTTPYVHGALEGAKQ RAAKTIFITCVPVEQFSIKVDVDIRLLVGPELLSGSTRLKAGTVTKMALNILSTGVMVRLGKVYGNRMIDVAIKNSKLRD RALRIIEDLTELSRDEAEELLNKSGDSVKLALLMHWSNLKKEEGDRVLSEYQGNLRAAMKNVSFSTE
Specific function: Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
COG id: COG2103
COG function: function code R; Predicted sugar phosphate isomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SIS domain
Homologues:
Organism=Escherichia coli, GI1788768, Length=287, Percent_Identity=42.1602787456446, Blast_Score=229, Evalue=1e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURQ_TRIEI (Q119L1)
Other databases:
- EMBL: CP000393 - RefSeq: YP_720286.1 - ProteinModelPortal: Q119L1 - SMR: Q119L1 - STRING: Q119L1 - GeneID: 4242516 - GenomeReviews: CP000393_GR - KEGG: ter:Tery_0340 - NMPDR: fig|203124.1.peg.2466 - eggNOG: COG2103 - HOGENOM: HBG703490 - OMA: SMIGVGK - PhylomeDB: Q119L1 - ProtClustDB: PRK05441 - BioCyc: TERY203124:TERY_0340-MONOMER - HAMAP: MF_00068 - InterPro: IPR005486 - InterPro: IPR005488 - TIGRFAMs: TIGR00274
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33245; Mature: 33245
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: PS01272 GCKR; PS51464 SIS
Important sites: ACT_SITE 87-87 ACT_SITE 118-118
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLQQRGHLLTEQVNPNSHNLDQLSSLELVDLFNQEDKQTLKAIASSRLQLAQAVDMTT CCCHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH KALSQGGKLFYVGAGTSGRLGVLDAAECPPTFCTSPELVQGIIAGGANALLRSSEDLEDS HHHHCCCCEEEEECCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCHHHHHCCCCCHHHH WEDGNEAIASHNITNLDVIVGITAGGTTPYVHGALEGAKQRAAKTIFITCVPVEQFSIKV HCCCCHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEEEEEHHHEEEEE DVDIRLLVGPELLSGSTRLKAGTVTKMALNILSTGVMVRLGKVYGNRMIDVAIKNSKLRD EEEEEEEECCHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHH RALRIIEDLTELSRDEAEELLNKSGDSVKLALLMHWSNLKKEEGDRVLSEYQGNLRAAMK HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHCCHHHHHHHHHHHCCHHHHHHH NVSFSTE HCCCCCC >Mature Secondary Structure MKNLQQRGHLLTEQVNPNSHNLDQLSSLELVDLFNQEDKQTLKAIASSRLQLAQAVDMTT CCCHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH KALSQGGKLFYVGAGTSGRLGVLDAAECPPTFCTSPELVQGIIAGGANALLRSSEDLEDS HHHHCCCCEEEEECCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCHHHHHCCCCCHHHH WEDGNEAIASHNITNLDVIVGITAGGTTPYVHGALEGAKQRAAKTIFITCVPVEQFSIKV HCCCCHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEEEEEHHHEEEEE DVDIRLLVGPELLSGSTRLKAGTVTKMALNILSTGVMVRLGKVYGNRMIDVAIKNSKLRD EEEEEEEECCHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHH RALRIIEDLTELSRDEAEELLNKSGDSVKLALLMHWSNLKKEEGDRVLSEYQGNLRAAMK HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHCCHHHHHHHHHHHCCHHHHHHH NVSFSTE HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA