Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474196

Identifier: 113474196

GI number: 113474196

Start: 471882

End: 474209

Strand: Reverse

Name: 113474196

Synonym: Tery_0306

Alternate gene names: NA

Gene position: 474209-471882 (Counterclockwise)

Preceding gene: 113474197

Following gene: 113474195

Centisome position: 6.12

GC content: 35.48

Gene sequence:

>2328_bases
TTGTTGGCTACAAGTTGGGGGTCTGTTTCTCTGGTTTTTGTATTAGTATCAAGGTCAATTTCTGGTTCTAGTTCTAGAGG
TTTTTTGAAGATAGAAATTGCTGGTTCCATTTTTCCCTATTTTGCTAATTTTTTACCTTCTTTTACTTTGGCAGGAGCAG
CAAATTTGTTGGCTACAAGTTGGGGGTCTGTTTCTCTGGTTTTTGTATTAGTATCAAGGTCAATTTCTGGTTCCAGTTAT
AGAGCTTTTTTGAAGATAGAAATTGCTGGTTCCATTTTTCCCTATTTTGCTAATTTTTTACCTTCTTTTACTTTGGCAGG
AGCAGCAAATTTGTTGGCTACAAGTTGGGGGTCTGTTTCTCTGGTTTTTGTATTAGTATCAAGGTCAATTTCTGGTTCTA
GTTATAGAGCTTTTTTGAAGATAGAAATTGCTGATTCCATTTTTCCCTATTTTGCTAATTTTTTACCTTCTTTTACTTTG
GCAGGAGCAGCAAATTTGTTGGCTACAAGTTGGGGGTCTGTTTCTCTGGTTTTTGTATTAGTATCAAGGTCAATTTCTGG
TTCTAGTTCTAGAGCTTTTTTGAAGATAGAAATTGCTGGTTCCATTTTTCCCTATTTTGCTAATTTTTTACCTTCTTTTA
CTTTGGCAGGAGCAGCAAATTTGTTGGCTACAAGTTGGGGGTCTGTTTCTCTGGTTTTTGTATTAGTATCAAGGTCAATT
TCTGGTTCCAGTTCTAGAGATTTTTTGAAGATAGAAATTGTCTGTTCCATTTTTCCCTATTTTGCTAATTTTTTACCTTC
TTTTACTTTGGCAGGAGCAGCAAATTTGTTGGCTACAAGTTGGGGGTCTGTTTCTCTGGTTTTTGTATTAGGATCGAGGT
CAATTTCTGGTTCTAGTTCTAGAGGTTTTTTGAAGATAGAAATTGCTGGTTCCATTTTTCCCTATTTTGCTAATTTTTTA
CCTTCTTTTACTTTGGCAGGAGCAGCAAATTTGTTGGCTACAAGTTGGGGGTCTGTTTCTCTGGTTTTTGTATTAGTATC
AAGGTCAATTTCTGGTTCCAGTTCTAGAGATTTTTTGAAGATAGAAATTGTCTGTTCCATTTTTCCCTATTTTGCTAATT
TTTTACCTTCTTTTACTTTGGCAGGAGCAGCAAATTTGTTGGCTACAAGTTGGGGGTCTGTTTCTCTGGTTTTTGTATTA
GTATCAAGGTCAATTTCTGGTTCCAGTTCTAGAGATTTTTTGAAGATAGAAATTGTCTGTTTTATTTTTCCCTATTTTGC
TAATTTTTTACCTTCTTTTACTTTGGCAGGAGCAGCAAATTTGTTGGCTACAAGTTGGGGGTCTATTTCTCTGGTTTTTG
TATTAGTATTGAGGTCAATTTCTGGTTCCAGTTCTAGAGGTTTTTTGAAGATAGAAATTGCTGGTTCCATTTTTCCCTAT
TTTGCTAATTTTTTACCTTCTTTTACTTTGGCAGGAGCAGAAAATTTGTTGGCTACAAGTTGGGGGTCTGTTTCTCTGGT
TTTTGTATTAGTATCAAGGTCAATTTCTGGTTCCAGTTCTAGAGATTTTTTGAAGATAGAAATTGTCTGTTTTATTTTTC
CCTATTTTGCTAATTTTTTACCTTCTTTTACTTTGGCAGGAGCAGCAAATTTGTTGGCTACAAGTTGGGGGTCTGTTTCT
CTGGTTTTTGTATTAGTATCAAGGTCAATTTCTGGTTCCAGTTCTAGAGATTTTTTGAAGATAGAAATTGCTGGTTCCAT
TTTTCCCTATTTTGCTAATTTTTTACCTTCTTTTACTTTGGCAGGAGCAGCAAATTTGTTGGCTACAAGTTGGGGGTCTG
TTTCTCTGGTTTTTGTATTAGTATCAAGGTCAATTTCTGGTTCCAGTTCTAGAGGTTTTTTGAAGATAGAAATTGCTGGT
TCCATTTTTCCCTATTTTGCTAATTTTTTACCTTCTTTTACTTTGGCAGGAGCAGCAAATTTGTTGGCTACAAGTTGGGG
GTCTGTTTCTCTGGTTTTTGTATTAGTATCAAGGTCAATTTCTGGTTCCAGTTCTAGAGATTTTTTGAAGATAGAAATTG
CTGGTTCCATTTTTCCCTATTTTGCTAATTTTTTACCTTCTTTTACTTTGGCAGGAGCAGCAAATTTGTTGGCTACAAGT
TGGGGGTCTGTTTCTCTGGTTTTTGTATTAGTATCAAGGTCAATTTCTGGTTCCAGTTCTAGAGGTTTTTTGAAGATAGA
AATTGCTGGTTCCATTTTTCCCTATTTTGCTAATTTTTTACCTTCTTTTACTTTGGCAGGAGCAGCAAATTTGTTGGCTA
CAAGTTGA

Upstream 100 bases:

>100_bases
TTCTAGTTCTAGAGATTTTTTGAAGATAGAAATTGTCTGTTTTATTTTTCCCTATTTTGCTAGTTTTTTACCTTCTTCTA
CTTTGGCATAAGCAGCAAAT

Downstream 100 bases:

>100_bases
GGGTCTGTTTCTCTGGTTTTTGTATTAGGAACGAGGTCAATTTCTGGTTCCAGTTCTAGAGCTTTTTTGAAGATAGAAAT
TGCTGGTTCCATTTTTCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 775; Mature: 775

Protein sequence:

>775_residues
MLATSWGSVSLVFVLVSRSISGSSSRGFLKIEIAGSIFPYFANFLPSFTLAGAANLLATSWGSVSLVFVLVSRSISGSSY
RAFLKIEIAGSIFPYFANFLPSFTLAGAANLLATSWGSVSLVFVLVSRSISGSSYRAFLKIEIADSIFPYFANFLPSFTL
AGAANLLATSWGSVSLVFVLVSRSISGSSSRAFLKIEIAGSIFPYFANFLPSFTLAGAANLLATSWGSVSLVFVLVSRSI
SGSSSRDFLKIEIVCSIFPYFANFLPSFTLAGAANLLATSWGSVSLVFVLGSRSISGSSSRGFLKIEIAGSIFPYFANFL
PSFTLAGAANLLATSWGSVSLVFVLVSRSISGSSSRDFLKIEIVCSIFPYFANFLPSFTLAGAANLLATSWGSVSLVFVL
VSRSISGSSSRDFLKIEIVCFIFPYFANFLPSFTLAGAANLLATSWGSISLVFVLVLRSISGSSSRGFLKIEIAGSIFPY
FANFLPSFTLAGAENLLATSWGSVSLVFVLVSRSISGSSSRDFLKIEIVCFIFPYFANFLPSFTLAGAANLLATSWGSVS
LVFVLVSRSISGSSSRDFLKIEIAGSIFPYFANFLPSFTLAGAANLLATSWGSVSLVFVLVSRSISGSSSRGFLKIEIAG
SIFPYFANFLPSFTLAGAANLLATSWGSVSLVFVLVSRSISGSSSRDFLKIEIAGSIFPYFANFLPSFTLAGAANLLATS
WGSVSLVFVLVSRSISGSSSRGFLKIEIAGSIFPYFANFLPSFTLAGAANLLATS

Sequences:

>Translated_775_residues
MLATSWGSVSLVFVLVSRSISGSSSRGFLKIEIAGSIFPYFANFLPSFTLAGAANLLATSWGSVSLVFVLVSRSISGSSY
RAFLKIEIAGSIFPYFANFLPSFTLAGAANLLATSWGSVSLVFVLVSRSISGSSYRAFLKIEIADSIFPYFANFLPSFTL
AGAANLLATSWGSVSLVFVLVSRSISGSSSRAFLKIEIAGSIFPYFANFLPSFTLAGAANLLATSWGSVSLVFVLVSRSI
SGSSSRDFLKIEIVCSIFPYFANFLPSFTLAGAANLLATSWGSVSLVFVLGSRSISGSSSRGFLKIEIAGSIFPYFANFL
PSFTLAGAANLLATSWGSVSLVFVLVSRSISGSSSRDFLKIEIVCSIFPYFANFLPSFTLAGAANLLATSWGSVSLVFVL
VSRSISGSSSRDFLKIEIVCFIFPYFANFLPSFTLAGAANLLATSWGSISLVFVLVLRSISGSSSRGFLKIEIAGSIFPY
FANFLPSFTLAGAENLLATSWGSVSLVFVLVSRSISGSSSRDFLKIEIVCFIFPYFANFLPSFTLAGAANLLATSWGSVS
LVFVLVSRSISGSSSRDFLKIEIAGSIFPYFANFLPSFTLAGAANLLATSWGSVSLVFVLVSRSISGSSSRGFLKIEIAG
SIFPYFANFLPSFTLAGAANLLATSWGSVSLVFVLVSRSISGSSSRDFLKIEIAGSIFPYFANFLPSFTLAGAANLLATS
WGSVSLVFVLVSRSISGSSSRGFLKIEIAGSIFPYFANFLPSFTLAGAANLLATS
>Mature_775_residues
MLATSWGSVSLVFVLVSRSISGSSSRGFLKIEIAGSIFPYFANFLPSFTLAGAANLLATSWGSVSLVFVLVSRSISGSSY
RAFLKIEIAGSIFPYFANFLPSFTLAGAANLLATSWGSVSLVFVLVSRSISGSSYRAFLKIEIADSIFPYFANFLPSFTL
AGAANLLATSWGSVSLVFVLVSRSISGSSSRAFLKIEIAGSIFPYFANFLPSFTLAGAANLLATSWGSVSLVFVLVSRSI
SGSSSRDFLKIEIVCSIFPYFANFLPSFTLAGAANLLATSWGSVSLVFVLGSRSISGSSSRGFLKIEIAGSIFPYFANFL
PSFTLAGAANLLATSWGSVSLVFVLVSRSISGSSSRDFLKIEIVCSIFPYFANFLPSFTLAGAANLLATSWGSVSLVFVL
VSRSISGSSSRDFLKIEIVCFIFPYFANFLPSFTLAGAANLLATSWGSISLVFVLVLRSISGSSSRGFLKIEIAGSIFPY
FANFLPSFTLAGAENLLATSWGSVSLVFVLVSRSISGSSSRDFLKIEIVCFIFPYFANFLPSFTLAGAANLLATSWGSVS
LVFVLVSRSISGSSSRDFLKIEIAGSIFPYFANFLPSFTLAGAANLLATSWGSVSLVFVLVSRSISGSSSRGFLKIEIAG
SIFPYFANFLPSFTLAGAANLLATSWGSVSLVFVLVSRSISGSSSRDFLKIEIAGSIFPYFANFLPSFTLAGAANLLATS
WGSVSLVFVLVSRSISGSSSRGFLKIEIAGSIFPYFANFLPSFTLAGAANLLATS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81922; Mature: 81922

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.1 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.1 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLATSWGSVSLVFVLVSRSISGSSSRGFLKIEIAGSIFPYFANFLPSFTLAGAANLLATS
CCCCCCCCHHEEEEEHHCCCCCCCCCCEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHCC
WGSVSLVFVLVSRSISGSSYRAFLKIEIAGSIFPYFANFLPSFTLAGAANLLATSWGSVS
CCCHHEEEEEHHCCCCCCCEEEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHH
LVFVLVSRSISGSSYRAFLKIEIADSIFPYFANFLPSFTLAGAANLLATSWGSVSLVFVL
EEEEEHHCCCCCCCEEEEEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHEEEEE
VSRSISGSSSRAFLKIEIAGSIFPYFANFLPSFTLAGAANLLATSWGSVSLVFVLVSRSI
HHCCCCCCCCCEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHHEEEEEHHCCC
SGSSSRDFLKIEIVCSIFPYFANFLPSFTLAGAANLLATSWGSVSLVFVLGSRSISGSSS
CCCCCCCEEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCC
RGFLKIEIAGSIFPYFANFLPSFTLAGAANLLATSWGSVSLVFVLVSRSISGSSSRDFLK
CCEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHHEEEEEHHCCCCCCCCCCEEE
IEIVCSIFPYFANFLPSFTLAGAANLLATSWGSVSLVFVLVSRSISGSSSRDFLKIEIVC
EEEHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHEEEEEHHCCCCCCCCCCEEEEEEHH
FIFPYFANFLPSFTLAGAANLLATSWGSISLVFVLVLRSISGSSSRGFLKIEIAGSIFPY
HHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHH
FANFLPSFTLAGAENLLATSWGSVSLVFVLVSRSISGSSSRDFLKIEIVCFIFPYFANFL
HHHHCCCEECCCCCHHHHCCCCCHHEEEEEHHCCCCCCCCCCEEEEEEHHHHHHHHHHHC
PSFTLAGAANLLATSWGSVSLVFVLVSRSISGSSSRDFLKIEIAGSIFPYFANFLPSFTL
CCHHHHHHHHHHHCCCCCHHEEEEEHHCCCCCCCCCCEEEEEECCCHHHHHHHHCCCHHH
AGAANLLATSWGSVSLVFVLVSRSISGSSSRGFLKIEIAGSIFPYFANFLPSFTLAGAAN
HHHHHHHHCCCCCHHEEEEEHHCCCCCCCCCCEEEEEECCCHHHHHHHHCCCHHHHHHHH
LLATSWGSVSLVFVLVSRSISGSSSRDFLKIEIAGSIFPYFANFLPSFTLAGAANLLATS
HHHCCCCCHHEEEEEHHCCCCCCCCCCEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHCC
WGSVSLVFVLVSRSISGSSSRGFLKIEIAGSIFPYFANFLPSFTLAGAANLLATS
CCCHHEEEEEHHCCCCCCCCCCEEEEEECCCHHHHHHHHCCCHHHHCCHHHHCCC
>Mature Secondary Structure
MLATSWGSVSLVFVLVSRSISGSSSRGFLKIEIAGSIFPYFANFLPSFTLAGAANLLATS
CCCCCCCCHHEEEEEHHCCCCCCCCCCEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHCC
WGSVSLVFVLVSRSISGSSYRAFLKIEIAGSIFPYFANFLPSFTLAGAANLLATSWGSVS
CCCHHEEEEEHHCCCCCCCEEEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHH
LVFVLVSRSISGSSYRAFLKIEIADSIFPYFANFLPSFTLAGAANLLATSWGSVSLVFVL
EEEEEHHCCCCCCCEEEEEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHEEEEE
VSRSISGSSSRAFLKIEIAGSIFPYFANFLPSFTLAGAANLLATSWGSVSLVFVLVSRSI
HHCCCCCCCCCEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHHEEEEEHHCCC
SGSSSRDFLKIEIVCSIFPYFANFLPSFTLAGAANLLATSWGSVSLVFVLGSRSISGSSS
CCCCCCCEEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCC
RGFLKIEIAGSIFPYFANFLPSFTLAGAANLLATSWGSVSLVFVLVSRSISGSSSRDFLK
CCEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHHEEEEEHHCCCCCCCCCCEEE
IEIVCSIFPYFANFLPSFTLAGAANLLATSWGSVSLVFVLVSRSISGSSSRDFLKIEIVC
EEEHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHEEEEEHHCCCCCCCCCCEEEEEEHH
FIFPYFANFLPSFTLAGAANLLATSWGSISLVFVLVLRSISGSSSRGFLKIEIAGSIFPY
HHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHH
FANFLPSFTLAGAENLLATSWGSVSLVFVLVSRSISGSSSRDFLKIEIVCFIFPYFANFL
HHHHCCCEECCCCCHHHHCCCCCHHEEEEEHHCCCCCCCCCCEEEEEEHHHHHHHHHHHC
PSFTLAGAANLLATSWGSVSLVFVLVSRSISGSSSRDFLKIEIAGSIFPYFANFLPSFTL
CCHHHHHHHHHHHCCCCCHHEEEEEHHCCCCCCCCCCEEEEEECCCHHHHHHHHCCCHHH
AGAANLLATSWGSVSLVFVLVSRSISGSSSRGFLKIEIAGSIFPYFANFLPSFTLAGAAN
HHHHHHHHCCCCCHHEEEEEHHCCCCCCCCCCEEEEEECCCHHHHHHHHCCCHHHHHHHH
LLATSWGSVSLVFVLVSRSISGSSSRDFLKIEIAGSIFPYFANFLPSFTLAGAANLLATS
HHHCCCCCHHEEEEEHHCCCCCCCCCCEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHCC
WGSVSLVFVLVSRSISGSSSRGFLKIEIAGSIFPYFANFLPSFTLAGAANLLATS
CCCHHEEEEEHHCCCCCCCCCCEEEEEECCCHHHHHHHHCCCHHHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA