Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is bcp [C]

Identifier: 113474134

GI number: 113474134

Start: 363849

End: 364400

Strand: Reverse

Name: bcp [C]

Synonym: Tery_0234

Alternate gene names: 113474134

Gene position: 364400-363849 (Counterclockwise)

Preceding gene: 113474135

Following gene: 113474131

Centisome position: 4.7

GC content: 31.88

Gene sequence:

>552_bases
ATGCTAACTTCTTATGATTTTAGGGGTTTACTAAATCAACGTTTTTTTCAAAATTTATTACCTATTCCAGCTATTAATGA
TTTGGATAATGGTAAAAGAACGCCAGATTTTGAATTACCAGATATTACAAATGGTAAGTTGGTTAGATTATCTAACTATT
GGGGAGTAACTCCTGTCATAGTTGCCTTGACTCGTATTTTTACTGAAAAGCAGTATTGCCCGTTTTGTTTTCCTCATATT
TTGGCTTTAAACAAAAATTATGAAAGGTTTTTAGAACGAGGAGTAGAAGTATTAATGATTACTAGTACCGATGAGAAGCA
AAGTAAGATAGTTGTGAATGATTTAAGTTTAAAAATGCCATTGCTTAGTGATTCTAGCTGTCAGGTATTTAAAAATTACA
AGGTTGGTCAAGCTTTAGGGGCGCCTTTATCAGGGCAGTTTGTATTGGATAAACAGGGTAGACTTTGCTACAAACATTTG
TTTTCTTTTCTAGATCATAATGCTAGTATTGAGGACTTGTTGGGTATTTTAGATAATTATATTTTTGAGTAA

Upstream 100 bases:

>100_bases
ATTTCCAGAAATATTCACTCCAACACTATGGCTGAGATGTTTGACCTCAAAGTGTTGGAGTTATAAATTTGAAATGTTGA
CTCTTTAATTAATTCTGATT

Downstream 100 bases:

>100_bases
AATAATTATTTACAGTTGAAATTAAGCACCATTACATTCATTGTTTTCTTACTCTAATTTGAAGTGAGTCATACAGCATA
AAAATTTTGGTATCACAAAT

Product: redoxin

Products: Acceptor; H2O; oxidized thioredoxin [C]

Alternate protein names: Antioxidant AhpC/TSA Family; Thiol-Specific Antioxidant Protein; Redoxin

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MLTSYDFRGLLNQRFFQNLLPIPAINDLDNGKRTPDFELPDITNGKLVRLSNYWGVTPVIVALTRIFTEKQYCPFCFPHI
LALNKNYERFLERGVEVLMITSTDEKQSKIVVNDLSLKMPLLSDSSCQVFKNYKVGQALGAPLSGQFVLDKQGRLCYKHL
FSFLDHNASIEDLLGILDNYIFE

Sequences:

>Translated_183_residues
MLTSYDFRGLLNQRFFQNLLPIPAINDLDNGKRTPDFELPDITNGKLVRLSNYWGVTPVIVALTRIFTEKQYCPFCFPHI
LALNKNYERFLERGVEVLMITSTDEKQSKIVVNDLSLKMPLLSDSSCQVFKNYKVGQALGAPLSGQFVLDKQGRLCYKHL
FSFLDHNASIEDLLGILDNYIFE
>Mature_183_residues
MLTSYDFRGLLNQRFFQNLLPIPAINDLDNGKRTPDFELPDITNGKLVRLSNYWGVTPVIVALTRIFTEKQYCPFCFPHI
LALNKNYERFLERGVEVLMITSTDEKQSKIVVNDLSLKMPLLSDSSCQVFKNYKVGQALGAPLSGQFVLDKQGRLCYKHL
FSFLDHNASIEDLLGILDNYIFE

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20974; Mature: 20974

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTSYDFRGLLNQRFFQNLLPIPAINDLDNGKRTPDFELPDITNGKLVRLSNYWGVTPVI
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHH
VALTRIFTEKQYCPFCFPHILALNKNYERFLERGVEVLMITSTDEKQSKIVVNDLSLKMP
HHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHCCCEEEEEECCCCCCCEEEEECCEEECC
LLSDSSCQVFKNYKVGQALGAPLSGQFVLDKQGRLCYKHLFSFLDHNASIEDLLGILDNY
CCCCCCHHHHHCCCCHHHHCCCCCCCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
IFE
HCC
>Mature Secondary Structure
MLTSYDFRGLLNQRFFQNLLPIPAINDLDNGKRTPDFELPDITNGKLVRLSNYWGVTPVI
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHH
VALTRIFTEKQYCPFCFPHILALNKNYERFLERGVEVLMITSTDEKQSKIVVNDLSLKMP
HHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHCCCEEEEEECCCCCCCEEEEECCEEECC
LLSDSSCQVFKNYKVGQALGAPLSGQFVLDKQGRLCYKHLFSFLDHNASIEDLLGILDNY
CCCCCCHHHHHCCCCHHHHCCCCCCCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
IFE
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: reduced acceptor; H2O2; reduced thioredoxin [C]

Specific reaction: reduced acceptor + H2O2 = Acceptor + H2O reduced thioredoxin + H2O2 = oxidized thioredoxin + H2O [C]

General reaction: Oxidoreductases; Acting on a peroxide as acceptor; Peroxidase [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA