Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474095

Identifier: 113474095

GI number: 113474095

Start: 289976

End: 291565

Strand: Reverse

Name: 113474095

Synonym: Tery_0193

Alternate gene names: NA

Gene position: 291565-289976 (Counterclockwise)

Preceding gene: 113474096

Following gene: 113474093

Centisome position: 3.76

GC content: 37.11

Gene sequence:

>1590_bases
ATGACAAAATTAGATACTGCTAATAGAGAAAAAGCCTTACTATTCAGGGAACTACAAACTCATTTATGCGATCGCTGGCA
AAATATAGATTTACCTGACCAGGGTGACTCGGATATTTTGATTATCCCTTCTGTAAGCCTAGACCAACGAGAGTTGCTAA
AAATACAGGGTGCTCACAATTACGAAGAACGACATCTATTTTCTTTAATACGTCTGCGTAACCCCCGCACCCGATTAATT
TATGTTACTTCTGAACCTCTACATCCCAGCATTATTGACTACTATTTGCAACTATTACCAGGAATTCCTTTTTCTCACGC
TCGCGATCGCTTGCTCCTATTTGCTACTTATGATGCTTCTAGCAGGCCTCTAACTGAAAAAATTTTAGAACGCCCCCGTC
TCATTGAGCGTATTCATCTGGCGTTGCGTCAGGAAAAATCTTACATGGTTTGTTATAATTGTACTCCACTTGAACGAGAA
TTGTCTGTGCACTTAGGTATTCCTCTATTAGGGACAGACCCAGATTTGAGTTATTGGGGTACTAAAAGTGGTAGTAGACA
AATCTTTACTGAATGTAATATTCCTCATCCTGATGGTAGTGAGTTAGTTTGGAATGTTGATGATTTGGCATTAGTAACAT
CCCAGTTGTGGGAACGGCAACCTCACCTCCAACGGATAGTTATTAAGTTGAATGAGGGTTTTTCAGGAGAAGGTAATGCC
CTGTTAGATTTACAACCACTACAAAAAGTCGGGAAGAGTGATAGGGTGAAAGCTATACTTAATAGTTTTAGGACACTGCG
GTTTCAGTCTGTTGATGAAACTTGGGAAAATTTTAGTAAGCGCATTTTTGAACTAGGGGCAATAGCAGAAGCTTTTATAG
AGGGAGATGTGAAGCGATCGCCCAGTGTGCAAGCTCGAATTACACCTAAAGGTGAAGTTGAAATTATCTCTACCCATGAC
CAAATTTTGGGGGGACCTGATGGGCAAATTTTTATCGGTTGTCGTTTTCCTGCTGATGAAGCTTACCGATTAAATTTACA
AAATTTAGGTATAAAAATCGGAAAAGTTTTGGCGAGAAAAGGTGCTTTGGATAAGTTTGGAGTAGATTTTATCGCTGTAA
ATAAAGGTACAAATAAATCGCCAAAATGGGATTTATTTGCGATTGAAATTAACTTACGTCGGGGTGGTACAACTCATCCA
TTTATGACATTAAAGTTATTAACAAATGGAAGTTATGATTATGAAACTGGTTTATTTTATAGTCAGCACGGGCCTGCAAA
ATTTTACAAAGCTACGGACAATTTACAAAAAATTTGTTATCGGGGTTTATTGCCTAATGATTTAATGGATATTGTGGCTT
TTAATAGATTACATTTTGATAGTAGTACTGAAACAGGAACGTTATTTCATATGATGGGTTGTTTATCACAATTTGGCAAA
TTAGGCTTAACAAGTATTGGTAATTCTCCTAAACAAGCAGAGGAAGTTTATCAGAAAGTTGTTGATACTTTAGATAATGA
AACTGTAGGAAATAATAAGAGTTGGGGATTACCCACAACTAATACTATTTCTTGGAATAGTTCAATTTAA

Upstream 100 bases:

>100_bases
GGCCATTTTAGATAAACGGGACTTACCCAAAGGCACTAAATGCTGATTATTATAGATGTCAAATTAGTTCTATCAAACTC
AATAATAATTGATAAAAACT

Downstream 100 bases:

>100_bases
TTTATTATTACTAAGCTTGAGTTTTTTCTTTCGAGATGCTGAACTAACAGGAAACATGGATGTTAATAGGCATTTCATGG
AAGTCAAAAGTTAACCACCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 529; Mature: 528

Protein sequence:

>529_residues
MTKLDTANREKALLFRELQTHLCDRWQNIDLPDQGDSDILIIPSVSLDQRELLKIQGAHNYEERHLFSLIRLRNPRTRLI
YVTSEPLHPSIIDYYLQLLPGIPFSHARDRLLLFATYDASSRPLTEKILERPRLIERIHLALRQEKSYMVCYNCTPLERE
LSVHLGIPLLGTDPDLSYWGTKSGSRQIFTECNIPHPDGSELVWNVDDLALVTSQLWERQPHLQRIVIKLNEGFSGEGNA
LLDLQPLQKVGKSDRVKAILNSFRTLRFQSVDETWENFSKRIFELGAIAEAFIEGDVKRSPSVQARITPKGEVEIISTHD
QILGGPDGQIFIGCRFPADEAYRLNLQNLGIKIGKVLARKGALDKFGVDFIAVNKGTNKSPKWDLFAIEINLRRGGTTHP
FMTLKLLTNGSYDYETGLFYSQHGPAKFYKATDNLQKICYRGLLPNDLMDIVAFNRLHFDSSTETGTLFHMMGCLSQFGK
LGLTSIGNSPKQAEEVYQKVVDTLDNETVGNNKSWGLPTTNTISWNSSI

Sequences:

>Translated_529_residues
MTKLDTANREKALLFRELQTHLCDRWQNIDLPDQGDSDILIIPSVSLDQRELLKIQGAHNYEERHLFSLIRLRNPRTRLI
YVTSEPLHPSIIDYYLQLLPGIPFSHARDRLLLFATYDASSRPLTEKILERPRLIERIHLALRQEKSYMVCYNCTPLERE
LSVHLGIPLLGTDPDLSYWGTKSGSRQIFTECNIPHPDGSELVWNVDDLALVTSQLWERQPHLQRIVIKLNEGFSGEGNA
LLDLQPLQKVGKSDRVKAILNSFRTLRFQSVDETWENFSKRIFELGAIAEAFIEGDVKRSPSVQARITPKGEVEIISTHD
QILGGPDGQIFIGCRFPADEAYRLNLQNLGIKIGKVLARKGALDKFGVDFIAVNKGTNKSPKWDLFAIEINLRRGGTTHP
FMTLKLLTNGSYDYETGLFYSQHGPAKFYKATDNLQKICYRGLLPNDLMDIVAFNRLHFDSSTETGTLFHMMGCLSQFGK
LGLTSIGNSPKQAEEVYQKVVDTLDNETVGNNKSWGLPTTNTISWNSSI
>Mature_528_residues
TKLDTANREKALLFRELQTHLCDRWQNIDLPDQGDSDILIIPSVSLDQRELLKIQGAHNYEERHLFSLIRLRNPRTRLIY
VTSEPLHPSIIDYYLQLLPGIPFSHARDRLLLFATYDASSRPLTEKILERPRLIERIHLALRQEKSYMVCYNCTPLEREL
SVHLGIPLLGTDPDLSYWGTKSGSRQIFTECNIPHPDGSELVWNVDDLALVTSQLWERQPHLQRIVIKLNEGFSGEGNAL
LDLQPLQKVGKSDRVKAILNSFRTLRFQSVDETWENFSKRIFELGAIAEAFIEGDVKRSPSVQARITPKGEVEIISTHDQ
ILGGPDGQIFIGCRFPADEAYRLNLQNLGIKIGKVLARKGALDKFGVDFIAVNKGTNKSPKWDLFAIEINLRRGGTTHPF
MTLKLLTNGSYDYETGLFYSQHGPAKFYKATDNLQKICYRGLLPNDLMDIVAFNRLHFDSSTETGTLFHMMGCLSQFGKL
GLTSIGNSPKQAEEVYQKVVDTLDNETVGNNKSWGLPTTNTISWNSSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI72534720, Length=442, Percent_Identity=23.0769230769231, Blast_Score=89, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60000; Mature: 59869

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKLDTANREKALLFRELQTHLCDRWQNIDLPDQGDSDILIIPSVSLDQRELLKIQGAHN
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHEECCCCC
YEERHLFSLIRLRNPRTRLIYVTSEPLHPSIIDYYLQLLPGIPFSHARDRLLLFATYDAS
HHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCC
SRPLTEKILERPRLIERIHLALRQEKSYMVCYNCTPLERELSVHLGIPLLGTDPDLSYWG
CCCHHHHHHHCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCEEECCCCCCCCCC
TKSGSRQIFTECNIPHPDGSELVWNVDDLALVTSQLWERQPHLQRIVIKLNEGFSGEGNA
CCCCCCEEEEECCCCCCCCCCEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCE
LLDLQPLQKVGKSDRVKAILNSFRTLRFQSVDETWENFSKRIFELGAIAEAFIEGDVKRS
EEEEHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PSVQARITPKGEVEIISTHDQILGGPDGQIFIGCRFPADEAYRLNLQNLGIKIGKVLARK
CCCEEEECCCCCEEEEECCHHHCCCCCCEEEEEEECCCCCCEEEEHHHCCHHHHHHHHHC
GALDKFGVDFIAVNKGTNKSPKWDLFAIEINLRRGGTTHPFMTLKLLTNGSYDYETGLFY
CCCHHHCCEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCEEE
SQHGPAKFYKATDNLQKICYRGLLPNDLMDIVAFNRLHFDSSTETGTLFHMMGCLSQFGK
CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHC
LGLTSIGNSPKQAEEVYQKVVDTLDNETVGNNKSWGLPTTNTISWNSSI
CCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCC
>Mature Secondary Structure 
TKLDTANREKALLFRELQTHLCDRWQNIDLPDQGDSDILIIPSVSLDQRELLKIQGAHN
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHEECCCCC
YEERHLFSLIRLRNPRTRLIYVTSEPLHPSIIDYYLQLLPGIPFSHARDRLLLFATYDAS
HHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCC
SRPLTEKILERPRLIERIHLALRQEKSYMVCYNCTPLERELSVHLGIPLLGTDPDLSYWG
CCCHHHHHHHCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCEEECCCCCCCCCC
TKSGSRQIFTECNIPHPDGSELVWNVDDLALVTSQLWERQPHLQRIVIKLNEGFSGEGNA
CCCCCCEEEEECCCCCCCCCCEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCE
LLDLQPLQKVGKSDRVKAILNSFRTLRFQSVDETWENFSKRIFELGAIAEAFIEGDVKRS
EEEEHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PSVQARITPKGEVEIISTHDQILGGPDGQIFIGCRFPADEAYRLNLQNLGIKIGKVLARK
CCCEEEECCCCCEEEEECCHHHCCCCCCEEEEEEECCCCCCEEEEHHHCCHHHHHHHHHC
GALDKFGVDFIAVNKGTNKSPKWDLFAIEINLRRGGTTHPFMTLKLLTNGSYDYETGLFY
CCCHHHCCEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCEEE
SQHGPAKFYKATDNLQKICYRGLLPNDLMDIVAFNRLHFDSSTETGTLFHMMGCLSQFGK
CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHC
LGLTSIGNSPKQAEEVYQKVVDTLDNETVGNNKSWGLPTTNTISWNSSI
CCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA