Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is murI

Identifier: 113474067

GI number: 113474067

Start: 242603

End: 243415

Strand: Reverse

Name: murI

Synonym: Tery_0161

Alternate gene names: 113474067

Gene position: 243415-242603 (Counterclockwise)

Preceding gene: 113474068

Following gene: 113474064

Centisome position: 3.14

GC content: 34.07

Gene sequence:

>813_bases
ATGACTACTGAAACCAGACAAAAAAGAATAGGAATTTTTGACAGTGGGATAGGTGGCTTAACTGTTTTAAGAGAATTATA
TAGACAGTTACCCAAAGAATCTATTCTTTACTTTGCCGATACAGCAAGATTACCTTATGGAACAAGAACTACCGAAGAGA
TTTTACAATTTGTAGATGAAATTATTACATGGCTAGTCAAAAGTGGAGTAAAAATGGTGTTGATGGCTTGCAATACCAGT
TCAGCTTTGGCTCTAGAAAAAGTTAAATCAAAATTTGATGTTCCTATTCTAGGATTAATTGTACCTGGAGCTAATACTGC
AGTGAAACAAGGAAAGAGAATAGGTGTTATTGCGACTCCTGCAACTGCTGCTAGTAATGCATATCGTTATGCTATTTTAG
AAGCAAATGCTTCTGTTCAAGTTTGGCAAGTTGGTTGTCCCTATTTCGTACCATTAATAGAGCAAAATCAGCTACATGAT
CCCTACACATATCAGATAGCAGAAGAATATTTAATGCCTCTAATACAGCAACAAATTGATACATTAGTTTATGGTTGCAC
TCACTATCCTTATTTAGAACCAATATTGCGTTCATTATTACCTAAGTCGGTGATTTTTGTAGATCCTGCAGTTTCTCTGG
TTAAGGTAGTAGCTAGAGAGTTAAAAATTATGAATTTGGAAAACGATAAAACACCAAAACCAACAAAATTTGTAGTTAGT
TCTTCTCCACAAAAATTTGCTGATTTATCATTACAATTGCTTGGTTACAAACCAGATGTACAAGTAATTTCTTTACCAGC
TATGCTAAAGTAA

Upstream 100 bases:

>100_bases
TCAGAGGTTAAATTCGCAACACAGACTAAATTTGAGAGGCGTGAGAAGCTCTTAACTGCCCCGAGGACTGCTATAGTTGA
TTTATGTAAATACTCAAATA

Downstream 100 bases:

>100_bases
TTTAATGCTAGTTTCTATATAGACTTCACAGAGGCAGATTTATTCTAATTAATTCTGTTTATATAAAAGATATGCTATTA
AGCCTTATAAGTTATGATTA

Product: glutamate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MTTETRQKRIGIFDSGIGGLTVLRELYRQLPKESILYFADTARLPYGTRTTEEILQFVDEIITWLVKSGVKMVLMACNTS
SALALEKVKSKFDVPILGLIVPGANTAVKQGKRIGVIATPATAASNAYRYAILEANASVQVWQVGCPYFVPLIEQNQLHD
PYTYQIAEEYLMPLIQQQIDTLVYGCTHYPYLEPILRSLLPKSVIFVDPAVSLVKVVARELKIMNLENDKTPKPTKFVVS
SSPQKFADLSLQLLGYKPDVQVISLPAMLK

Sequences:

>Translated_270_residues
MTTETRQKRIGIFDSGIGGLTVLRELYRQLPKESILYFADTARLPYGTRTTEEILQFVDEIITWLVKSGVKMVLMACNTS
SALALEKVKSKFDVPILGLIVPGANTAVKQGKRIGVIATPATAASNAYRYAILEANASVQVWQVGCPYFVPLIEQNQLHD
PYTYQIAEEYLMPLIQQQIDTLVYGCTHYPYLEPILRSLLPKSVIFVDPAVSLVKVVARELKIMNLENDKTPKPTKFVVS
SSPQKFADLSLQLLGYKPDVQVISLPAMLK
>Mature_269_residues
TTETRQKRIGIFDSGIGGLTVLRELYRQLPKESILYFADTARLPYGTRTTEEILQFVDEIITWLVKSGVKMVLMACNTSS
ALALEKVKSKFDVPILGLIVPGANTAVKQGKRIGVIATPATAASNAYRYAILEANASVQVWQVGCPYFVPLIEQNQLHDP
YTYQIAEEYLMPLIQQQIDTLVYGCTHYPYLEPILRSLLPKSVIFVDPAVSLVKVVARELKIMNLENDKTPKPTKFVVSS
SPQKFADLSLQLLGYKPDVQVISLPAMLK

Specific function: Provides the (R)-glutamate required for cell wall biosynthesis

COG id: COG0796

COG function: function code M; Glutamate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family

Homologues:

Organism=Escherichia coli, GI87082355, Length=212, Percent_Identity=28.7735849056604, Blast_Score=89, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MURI_TRIEI (Q11A19)

Other databases:

- EMBL:   CP000393
- RefSeq:   YP_720128.1
- ProteinModelPortal:   Q11A19
- SMR:   Q11A19
- STRING:   Q11A19
- GeneID:   4241754
- GenomeReviews:   CP000393_GR
- KEGG:   ter:Tery_0161
- NMPDR:   fig|203124.1.peg.1717
- eggNOG:   COG0796
- HOGENOM:   HBG645102
- OMA:   AILGCTH
- PhylomeDB:   Q11A19
- ProtClustDB:   PRK00865
- BioCyc:   TERY203124:TERY_0161-MONOMER
- HAMAP:   MF_00258
- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004391
- Gene3D:   G3DSA:3.40.50.1860
- TIGRFAMs:   TIGR00067

Pfam domain/function: PF01177 Asp_Glu_race; SSF53681 Asp/Glu_race

EC number: =5.1.1.3

Molecular weight: Translated: 30096; Mature: 29964

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: PS00923 ASP_GLU_RACEMASE_1; PS00924 ASP_GLU_RACEMASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTETRQKRIGIFDSGIGGLTVLRELYRQLPKESILYFADTARLPYGTRTTEEILQFVDE
CCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCHHHEEEEEECCCCCCCCCCHHHHHHHHHH
IITWLVKSGVKMVLMACNTSSALALEKVKSKFDVPILGLIVPGANTAVKQGKRIGVIATP
HHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCEEEEEECC
ATAASNAYRYAILEANASVQVWQVGCPYFVPLIEQNQLHDPYTYQIAEEYLMPLIQQQID
CHHCCCCEEEEEEECCCCEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
TLVYGCTHYPYLEPILRSLLPKSVIFVDPAVSLVKVVARELKIMNLENDKTPKPTKFVVS
HHHHCCCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEC
SSPQKFADLSLQLLGYKPDVQVISLPAMLK
CCCHHHHHCEEEEECCCCCCEEEECCCCCC
>Mature Secondary Structure 
TTETRQKRIGIFDSGIGGLTVLRELYRQLPKESILYFADTARLPYGTRTTEEILQFVDE
CCCCHHHHCCCCCCCCCHHHHHHHHHHHCCHHHEEEEEECCCCCCCCCCHHHHHHHHHH
IITWLVKSGVKMVLMACNTSSALALEKVKSKFDVPILGLIVPGANTAVKQGKRIGVIATP
HHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCEEEEEECC
ATAASNAYRYAILEANASVQVWQVGCPYFVPLIEQNQLHDPYTYQIAEEYLMPLIQQQID
CHHCCCCEEEEEEECCCCEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
TLVYGCTHYPYLEPILRSLLPKSVIFVDPAVSLVKVVARELKIMNLENDKTPKPTKFVVS
HHHHCCCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEC
SSPQKFADLSLQLLGYKPDVQVISLPAMLK
CCCHHHHHCEEEEECCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA