Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474060

Identifier: 113474060

GI number: 113474060

Start: 224551

End: 225456

Strand: Direct

Name: 113474060

Synonym: Tery_0153

Alternate gene names: NA

Gene position: 224551-225456 (Clockwise)

Preceding gene: 113474059

Following gene: 113474063

Centisome position: 2.9

GC content: 34.33

Gene sequence:

>906_bases
ATGCCAATAAGTAATAAACCGCAATTACAATCTCCACCATTTAGTATTAATAATGTTAAAGTTGCTTTTGATTGCCCGCG
TTTGTTTTATTTGAAACATAGTTTTGGAGGTAATCATCCGTTTTTTCCCAAGAATTATATCCAGGAAATTGATAATGCTT
TTCTTGACTTAGCTAATCAGTTAATGAATATGATTTGGCAAGAATCTAGAATTAAAGTTTTGTTTGCAGGACAATTTGAG
GGGTTGGTGGTAGGGGCGATCGCTAATCAAATACAGCAATTATTTTATGGTTTGATTTTCTTTCCTTATTTACAAACAAT
AATTACAAAAGATGCTACTTTAACAACAGCATTGTATCAAATTTGGCGGGTTTTAACTAAAATGATTTTTAATATATCTA
AAATCATTGTTAAAAATCGGCGTTACTGTCATGAAAGTGTTGTGCTTCATCGCACATTAATTATGGGAGAAACACTAGTA
GATTATACTTTTAAAATACCAGATGGTAAGACTCAAAAGTTAACGGGAAAAGTTAATAATTTAATTTTTGATTTTGAGTC
TCGTCGCTTGTGTGTGGTTCATTTTCAAACTTATGAAACTGTGGAAGTATTGTCTCATTTAATAGGAGTTGCTCTCCATA
GTTTTTTGCTTAAACAAAAGAAAAAAGTGCCTGTTGATGCTCTTGTTTATTGGGTTTTGCCTGAGTTGGGAGAGTATTAT
TATTCCTGGGAAAAGTTGGAGAACGTAGTGGAGAGTTTAGTTCCCAATAAGTTGGAAGAGATGCGGGAGTGGTTGAAATG
GGAGGAGTTTCAACCTGGCTCACCTCCACCTACGGAGAAAGAGTATTTATGTGATATTTGCCCTCAAAAGGAAAGGTGTC
AGAGTTTTTTTGATGGGGGTGGGTAA

Upstream 100 bases:

>100_bases
CAGTAGATTGAGAAATGTTATAGATAAAACTGATAATTATTAAAAATTGTTAGTTACGTTAATTGCTTGAAAAAAACAGG
AAAATTAAAATAGTCCGTCA

Downstream 100 bases:

>100_bases
AGGTGTTAACAAAGTCAGAACTTACAAATTCAGAAGTTGTTTTTGTAATGGAGATTTTGATTAACCCTCAAAAAACATTT
TGCCTGGTAGTTTTAGATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MPISNKPQLQSPPFSINNVKVAFDCPRLFYLKHSFGGNHPFFPKNYIQEIDNAFLDLANQLMNMIWQESRIKVLFAGQFE
GLVVGAIANQIQQLFYGLIFFPYLQTIITKDATLTTALYQIWRVLTKMIFNISKIIVKNRRYCHESVVLHRTLIMGETLV
DYTFKIPDGKTQKLTGKVNNLIFDFESRRLCVVHFQTYETVEVLSHLIGVALHSFLLKQKKKVPVDALVYWVLPELGEYY
YSWEKLENVVESLVPNKLEEMREWLKWEEFQPGSPPPTEKEYLCDICPQKERCQSFFDGGG

Sequences:

>Translated_301_residues
MPISNKPQLQSPPFSINNVKVAFDCPRLFYLKHSFGGNHPFFPKNYIQEIDNAFLDLANQLMNMIWQESRIKVLFAGQFE
GLVVGAIANQIQQLFYGLIFFPYLQTIITKDATLTTALYQIWRVLTKMIFNISKIIVKNRRYCHESVVLHRTLIMGETLV
DYTFKIPDGKTQKLTGKVNNLIFDFESRRLCVVHFQTYETVEVLSHLIGVALHSFLLKQKKKVPVDALVYWVLPELGEYY
YSWEKLENVVESLVPNKLEEMREWLKWEEFQPGSPPPTEKEYLCDICPQKERCQSFFDGGG
>Mature_300_residues
PISNKPQLQSPPFSINNVKVAFDCPRLFYLKHSFGGNHPFFPKNYIQEIDNAFLDLANQLMNMIWQESRIKVLFAGQFEG
LVVGAIANQIQQLFYGLIFFPYLQTIITKDATLTTALYQIWRVLTKMIFNISKIIVKNRRYCHESVVLHRTLIMGETLVD
YTFKIPDGKTQKLTGKVNNLIFDFESRRLCVVHFQTYETVEVLSHLIGVALHSFLLKQKKKVPVDALVYWVLPELGEYYY
SWEKLENVVESLVPNKLEEMREWLKWEEFQPGSPPPTEKEYLCDICPQKERCQSFFDGGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35090; Mature: 34959

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPISNKPQLQSPPFSINNVKVAFDCPRLFYLKHSFGGNHPFFPKNYIQEIDNAFLDLANQ
CCCCCCCCCCCCCCCCCCEEEEEECCHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
LMNMIWQESRIKVLFAGQFEGLVVGAIANQIQQLFYGLIFFPYLQTIITKDATLTTALYQ
HHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
IWRVLTKMIFNISKIIVKNRRYCHESVVLHRTLIMGETLVDYTFKIPDGKTQKLTGKVNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEECCCCCCHHHHHHHHH
LIFDFESRRLCVVHFQTYETVEVLSHLIGVALHSFLLKQKKKVPVDALVYWVLPELGEYY
HEEEECCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
YSWEKLENVVESLVPNKLEEMREWLKWEEFQPGSPPPTEKEYLCDICPQKERCQSFFDGG
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHCCC
G
C
>Mature Secondary Structure 
PISNKPQLQSPPFSINNVKVAFDCPRLFYLKHSFGGNHPFFPKNYIQEIDNAFLDLANQ
CCCCCCCCCCCCCCCCCEEEEEECCHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
LMNMIWQESRIKVLFAGQFEGLVVGAIANQIQQLFYGLIFFPYLQTIITKDATLTTALYQ
HHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
IWRVLTKMIFNISKIIVKNRRYCHESVVLHRTLIMGETLVDYTFKIPDGKTQKLTGKVNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEECCCCCCHHHHHHHHH
LIFDFESRRLCVVHFQTYETVEVLSHLIGVALHSFLLKQKKKVPVDALVYWVLPELGEYY
HEEEECCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
YSWEKLENVVESLVPNKLEEMREWLKWEEFQPGSPPPTEKEYLCDICPQKERCQSFFDGG
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA