Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474041

Identifier: 113474041

GI number: 113474041

Start: 196262

End: 197389

Strand: Direct

Name: 113474041

Synonym: Tery_0134

Alternate gene names: NA

Gene position: 196262-197389 (Clockwise)

Preceding gene: 113474027

Following gene: 113474042

Centisome position: 2.53

GC content: 29.79

Gene sequence:

>1128_bases
ATGGTAAATAAAGAAAATTCAGACAAATATCAAGAGGAAGAAAATGATGAAGAGGAAGAATATGAAAAGGATGACTTAAT
TTACGAGCCGGAGGAAATTAATATTATTACTAGAGAACCTACAATTGAACAGTTGGTGAGAAGAATAGATGAAAAAGTTC
TTGATTTAGCTCCAGATTTTCAGCGTCATTCTGATATATGGAAAGATGACGTTAAAAGTAGATTAATTGAATCTATTATT
ATTAGGATTCCTTTACCAGCTTTTTATATTGATGGTACTAATGAAGACAACTGGTTAGTAGTAGATGGATTGCAAAGACT
TTCAGCTTTAAAGCAGTTTATGATTAAAAGTAATAATAATTTACGGTTAACAGGTTTAGAATATCTTGGGGAAGAACTTA
ATAATAAAAGCTATGAAGAATTACCTCGTAAATATCAACGTCGTATTCAAGAAACTCAAGTTACTGTCTATCTAATTGCG
GCAGGTACACCACCTAAAGTTAAGTATAATATTTTTAAACGTATTAATACAGGAGGAGAACGTTTAACTCCTCAAGAAAT
ACGCCATGCTCTTAATCCTGGGAAAGTCCTCAAATTATTATTTTACCTTGCTAAATCTCCAGAATTTACTAATATTATTA
AGCTTGGTGAATCACGACTCAAACGTATGGATGATAGAGAATTTGTATTAGGTGCTTTAGCAGTTATGCTTACATCTAAT
TCTTATGAAAATTATACAAAAGATGGCAGAGAAGAATTTTTAGATAATGCGATGAAAAAAATTAATGGTTTATCTGATTC
GGAAATTAAAACACTTGAAAATAAATTTAGAAATACTATGATTATTTGCCAAGAAATATTTGGCAACGAAGCTTTCCGCA
AGCCAAAAAAACAAAGAAAAAATCCAGTTAATAAAGCATTATGTGAAACTTGGTCATTTCATATTAGTCAGCTTAATTCT
CAACAGATTCAGAAACTTAAAAATCGGAAGCCAGAATTATTAGATAAATTTGCCAAATATATAGATGATGACAAAGAATT
TTTGATGTCGATATCTCAAGCTCAAGATAAGATAGAATATCGTTTTAAAACTATTAAAAAAATTATCGAGGAAGTTCTAA
ATGATTAG

Upstream 100 bases:

>100_bases
CATACTTCTTGATAGTAGTTGTCAGTTTTAAGTAAAAGTTATCAATCTTATTTAATCTCAGATGGTATAATCAAAGTACA
AAAAAGAGGGGGTAAAATAT

Downstream 100 bases:

>100_bases
TTTATTACGTCTAAAAAATTTTAAACCTTTTTCTAATCAATCTCTATCATTTAGACCGTTAACTTTACTTTCTGGTCTGA
ATAGCACTGGTAAATTTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MVNKENSDKYQEEENDEEEEYEKDDLIYEPEEINIITREPTIEQLVRRIDEKVLDLAPDFQRHSDIWKDDVKSRLIESII
IRIPLPAFYIDGTNEDNWLVVDGLQRLSALKQFMIKSNNNLRLTGLEYLGEELNNKSYEELPRKYQRRIQETQVTVYLIA
AGTPPKVKYNIFKRINTGGERLTPQEIRHALNPGKVLKLLFYLAKSPEFTNIIKLGESRLKRMDDREFVLGALAVMLTSN
SYENYTKDGREEFLDNAMKKINGLSDSEIKTLENKFRNTMIICQEIFGNEAFRKPKKQRKNPVNKALCETWSFHISQLNS
QQIQKLKNRKPELLDKFAKYIDDDKEFLMSISQAQDKIEYRFKTIKKIIEEVLND

Sequences:

>Translated_375_residues
MVNKENSDKYQEEENDEEEEYEKDDLIYEPEEINIITREPTIEQLVRRIDEKVLDLAPDFQRHSDIWKDDVKSRLIESII
IRIPLPAFYIDGTNEDNWLVVDGLQRLSALKQFMIKSNNNLRLTGLEYLGEELNNKSYEELPRKYQRRIQETQVTVYLIA
AGTPPKVKYNIFKRINTGGERLTPQEIRHALNPGKVLKLLFYLAKSPEFTNIIKLGESRLKRMDDREFVLGALAVMLTSN
SYENYTKDGREEFLDNAMKKINGLSDSEIKTLENKFRNTMIICQEIFGNEAFRKPKKQRKNPVNKALCETWSFHISQLNS
QQIQKLKNRKPELLDKFAKYIDDDKEFLMSISQAQDKIEYRFKTIKKIIEEVLND
>Mature_375_residues
MVNKENSDKYQEEENDEEEEYEKDDLIYEPEEINIITREPTIEQLVRRIDEKVLDLAPDFQRHSDIWKDDVKSRLIESII
IRIPLPAFYIDGTNEDNWLVVDGLQRLSALKQFMIKSNNNLRLTGLEYLGEELNNKSYEELPRKYQRRIQETQVTVYLIA
AGTPPKVKYNIFKRINTGGERLTPQEIRHALNPGKVLKLLFYLAKSPEFTNIIKLGESRLKRMDDREFVLGALAVMLTSN
SYENYTKDGREEFLDNAMKKINGLSDSEIKTLENKFRNTMIICQEIFGNEAFRKPKKQRKNPVNKALCETWSFHISQLNS
QQIQKLKNRKPELLDKFAKYIDDDKEFLMSISQAQDKIEYRFKTIKKIIEEVLND

Specific function: Unknown

COG id: COG1479

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44200; Mature: 44200

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: PS00063 ALDOKETO_REDUCTASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNKENSDKYQEEENDEEEEYEKDDLIYEPEEINIITREPTIEQLVRRIDEKVLDLAPDF
CCCCCCCCHHHHCCCCCHHHHHHCCCEECCCCCEEEECCCHHHHHHHHHHHHHHHCCCCH
QRHSDIWKDDVKSRLIESIIIRIPLPAFYIDGTNEDNWLVVDGLQRLSALKQFMIKSNNN
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEHHHHHHHHHHHHHHHHCCCC
LRLTGLEYLGEELNNKSYEELPRKYQRRIQETQVTVYLIAAGTPPKVKYNIFKRINTGGE
EEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHCCCCC
RLTPQEIRHALNPGKVLKLLFYLAKSPEFTNIIKLGESRLKRMDDREFVLGALAVMLTSN
CCCHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
SYENYTKDGREEFLDNAMKKINGLSDSEIKTLENKFRNTMIICQEIFGNEAFRKPKKQRK
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHC
NPVNKALCETWSFHISQLNSQQIQKLKNRKPELLDKFAKYIDDDKEFLMSISQAQDKIEY
CHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
RFKTIKKIIEEVLND
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MVNKENSDKYQEEENDEEEEYEKDDLIYEPEEINIITREPTIEQLVRRIDEKVLDLAPDF
CCCCCCCCHHHHCCCCCHHHHHHCCCEECCCCCEEEECCCHHHHHHHHHHHHHHHCCCCH
QRHSDIWKDDVKSRLIESIIIRIPLPAFYIDGTNEDNWLVVDGLQRLSALKQFMIKSNNN
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEHHHHHHHHHHHHHHHHCCCC
LRLTGLEYLGEELNNKSYEELPRKYQRRIQETQVTVYLIAAGTPPKVKYNIFKRINTGGE
EEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHCCCCC
RLTPQEIRHALNPGKVLKLLFYLAKSPEFTNIIKLGESRLKRMDDREFVLGALAVMLTSN
CCCHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
SYENYTKDGREEFLDNAMKKINGLSDSEIKTLENKFRNTMIICQEIFGNEAFRKPKKQRK
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHC
NPVNKALCETWSFHISQLNSQQIQKLKNRKPELLDKFAKYIDDDKEFLMSISQAQDKIEY
CHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
RFKTIKKIIEEVLND
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA