Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474027

Identifier: 113474027

GI number: 113474027

Start: 163385

End: 163648

Strand: Direct

Name: 113474027

Synonym: Tery_0118

Alternate gene names: NA

Gene position: 163385-163648 (Clockwise)

Preceding gene: 113474019

Following gene: 113474041

Centisome position: 2.11

GC content: 34.47

Gene sequence:

>264_bases
TTGTTGGTAATTACTTTAGGCCAGCGTCAACTTCGTCAAACTTTAAACCGGACTAAATCTACTGTAAAAAATCAATTGGG
CCAAAAAATCAATTGGGCCGTCCTACTAATAGGCCAACAAAACGATTGGATATTTCAATGTTTTCAGTCGATTCATTTAT
TGATTAATTCTGGATTTAAGAGTATATCTAACCTCACTCCGGAACGTTTAGAATTATTGAAGTTTTTTCCTCCAAGTTGT
CAAAGATACTATCTACTCAGTTGA

Upstream 100 bases:

>100_bases
CACTATAGTTAGTGCCTTTCCGTAAGTCCTGTTAATCTATCGCCCCGAATGCTATCCCTGAAAGCCTTATAGCTATGGGC
ATGGATTTTCCATATTATGT

Downstream 100 bases:

>100_bases
GAAACTTGAGATGAAAACAGGTAGAGGGCCAAAATAATCAACGATTGAATAGTAGTAGAATAAATCCCTTGGCAATTAGT
GCGATCGCACTAGGTGATAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MLVITLGQRQLRQTLNRTKSTVKNQLGQKINWAVLLIGQQNDWIFQCFQSIHLLINSGFKSISNLTPERLELLKFFPPSC
QRYYLLS

Sequences:

>Translated_87_residues
MLVITLGQRQLRQTLNRTKSTVKNQLGQKINWAVLLIGQQNDWIFQCFQSIHLLINSGFKSISNLTPERLELLKFFPPSC
QRYYLLS
>Mature_87_residues
MLVITLGQRQLRQTLNRTKSTVKNQLGQKINWAVLLIGQQNDWIFQCFQSIHLLINSGFKSISNLTPERLELLKFFPPSC
QRYYLLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10181; Mature: 10181

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVITLGQRQLRQTLNRTKSTVKNQLGQKINWAVLLIGQQNDWIFQCFQSIHLLINSGFK
CEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH
SISNLTPERLELLKFFPPSCQRYYLLS
HHHCCCHHHHHHHHHCCCCCCEEEECC
>Mature Secondary Structure
MLVITLGQRQLRQTLNRTKSTVKNQLGQKINWAVLLIGQQNDWIFQCFQSIHLLINSGFK
CEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH
SISNLTPERLELLKFFPPSCQRYYLLS
HHHCCCHHHHHHHHHCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA