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The map label for this gene is yddW [H]

Identifier: 113474040

GI number: 113474040

Start: 194505

End: 195692

Strand: Reverse

Name: yddW [H]

Synonym: Tery_0133

Alternate gene names: 113474040

Gene position: 195692-194505 (Counterclockwise)

Preceding gene: 113474045

Following gene: 113474039

Centisome position: 2.53

GC content: 31.57

Gene sequence:

>1188_bases
ATGTCTAAATCCAAATCAATTTACCGAATCATTACCTTAACACTAATGGCAATTTTCACCACAATCACATTTGTATTAGC
ATCTAATCAAATTAGTAAATCTGCACAAAAAACAGAAATTCGTGGTGTTTGGATAACCAACATTGACAGCGAGGTTTTAT
TTTCTAGTTCAGAGACAAAAACAGCAATTAATCGTTTAGCAAATCTCAACTTCAACACACTTTATCCCACTATTTGGCAA
GGTGGTTATACTCTCTATCCTAGTCAAGTAGCTCAACAAGTATTTGGCAAATCATTAGATCCTGAAACTGGTTTACAAGG
ACGAGATGTTTTACAAGAAATTATTAGTGAAGGACACGAAAAAGGTTTAACAATTATTCCTTGGTTTGAATTTGGTTTTA
TGGCACCTGCAGATTCAGAATTAGCAAGATTACATCCTAATTGGCTGACTAAACGTAGGGATGGAACTACTATAAAAATG
GAAGGAAAATATCCTAGAGTTTGGCTTAATCCTTTTCATCCAGAAGTGCAACAATTTATTTTAGATTTAGTCATAGAAAT
TGTGACTAAATATGATATAGATGGAATACAATTTGATGATCATTTTGGCTTACCTTCTGAATTTGGTTATGATGATTTTA
CAGTAAAATTATATGAAAAAGAATTTCCTGGTTTATTGCCTTCTGATGATTATAAAGAAACTTTTTGGGTTCGTTGGAGA
GCAAATAAAATTAATAATTTTATGGAGCGGGTTTCTAAAGAAATAAAAGCGATAAAACCGGACTATATTATTTCTGTATC
TCCAAATCCTTTACACTTTGCTTTATCTGCTTATTTGCAAGATTGGTTTACTTGGGAAAGGGAAAAATGGATTGATGAAA
TTGTTTTACAGGTTTATCGTCCAGATATTAAACGTTTTATGAATGAGTTGGAACAAACAGAGGTAAAATTAGCAAAAAAT
CATATCCCTTTTGCTATTGGAATTTTGACTGGTTTAAAAGATAATTCTACTCCGATAAAGACAATTGAAGAACAGGTAGA
AGTTGTGCGGAAAAGAAATTTTGCGGGAGTATCATTCTTTTTCTATGAAAGTTTATGGAAATGGGGAAAGGAGTCAGAAA
ATATCAGAAATAAAAGTTTTGAGGAAATGTTTAAACATAAAACTTATAGACCATATATATCTGGTTAA

Upstream 100 bases:

>100_bases
GAAATTGAATAAATGATCCTATTGATATTTAGATTAATTATCAATACCTGAATCTGAGCAAAAGCTCAACTATAAAAAAT
TTAATCCCCCTAAAAATTTC

Downstream 100 bases:

>100_bases
AAGAAGGAATAAAGTAAATTTTTTCCTCTCAAGTCAATACCAAGACTATTTAATTTTAGGACAAAGCGTCACTCCATAAA
TTAGAAATAGCTACTCTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 394

Protein sequence:

>395_residues
MSKSKSIYRIITLTLMAIFTTITFVLASNQISKSAQKTEIRGVWITNIDSEVLFSSSETKTAINRLANLNFNTLYPTIWQ
GGYTLYPSQVAQQVFGKSLDPETGLQGRDVLQEIISEGHEKGLTIIPWFEFGFMAPADSELARLHPNWLTKRRDGTTIKM
EGKYPRVWLNPFHPEVQQFILDLVIEIVTKYDIDGIQFDDHFGLPSEFGYDDFTVKLYEKEFPGLLPSDDYKETFWVRWR
ANKINNFMERVSKEIKAIKPDYIISVSPNPLHFALSAYLQDWFTWEREKWIDEIVLQVYRPDIKRFMNELEQTEVKLAKN
HIPFAIGILTGLKDNSTPIKTIEEQVEVVRKRNFAGVSFFFYESLWKWGKESENIRNKSFEEMFKHKTYRPYISG

Sequences:

>Translated_395_residues
MSKSKSIYRIITLTLMAIFTTITFVLASNQISKSAQKTEIRGVWITNIDSEVLFSSSETKTAINRLANLNFNTLYPTIWQ
GGYTLYPSQVAQQVFGKSLDPETGLQGRDVLQEIISEGHEKGLTIIPWFEFGFMAPADSELARLHPNWLTKRRDGTTIKM
EGKYPRVWLNPFHPEVQQFILDLVIEIVTKYDIDGIQFDDHFGLPSEFGYDDFTVKLYEKEFPGLLPSDDYKETFWVRWR
ANKINNFMERVSKEIKAIKPDYIISVSPNPLHFALSAYLQDWFTWEREKWIDEIVLQVYRPDIKRFMNELEQTEVKLAKN
HIPFAIGILTGLKDNSTPIKTIEEQVEVVRKRNFAGVSFFFYESLWKWGKESENIRNKSFEEMFKHKTYRPYISG
>Mature_394_residues
SKSKSIYRIITLTLMAIFTTITFVLASNQISKSAQKTEIRGVWITNIDSEVLFSSSETKTAINRLANLNFNTLYPTIWQG
GYTLYPSQVAQQVFGKSLDPETGLQGRDVLQEIISEGHEKGLTIIPWFEFGFMAPADSELARLHPNWLTKRRDGTTIKME
GKYPRVWLNPFHPEVQQFILDLVIEIVTKYDIDGIQFDDHFGLPSEFGYDDFTVKLYEKEFPGLLPSDDYKETFWVRWRA
NKINNFMERVSKEIKAIKPDYIISVSPNPLHFALSAYLQDWFTWEREKWIDEIVLQVYRPDIKRFMNELEQTEVKLAKNH
IPFAIGILTGLKDNSTPIKTIEEQVEVVRKRNFAGVSFFFYESLWKWGKESENIRNKSFEEMFKHKTYRPYISG

Specific function: Unknown

COG id: COG1649

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0748 family [H]

Homologues:

Organism=Escherichia coli, GI1787767, Length=329, Percent_Identity=25.8358662613982, Blast_Score=79, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003790
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF02638 DUF187 [H]

EC number: NA

Molecular weight: Translated: 46183; Mature: 46052

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSKSIYRIITLTLMAIFTTITFVLASNQISKSAQKTEIRGVWITNIDSEVLFSSSETK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHCCCCHHH
TAINRLANLNFNTLYPTIWQGGYTLYPSQVAQQVFGKSLDPETGLQGRDVLQEIISEGHE
HHHHHHHCCCCCCCCHHHHCCCEEECHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
KGLTIIPWFEFGFMAPADSELARLHPNWLTKRRDGTTIKMEGKYPRVWLNPFHPEVQQFI
CCCEEEEEHHHCCCCCCCCHHHHCCCHHHHCCCCCCEEEECCCCCEEECCCCCHHHHHHH
LDLVIEIVTKYDIDGIQFDDHFGLPSEFGYDDFTVKLYEKEFPGLLPSDDYKETFWVRWR
HHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCEEEEEEHHHCCCCCCCCCCCCEEEEEEE
ANKINNFMERVSKEIKAIKPDYIISVSPNPLHFALSAYLQDWFTWEREKWIDEIVLQVYR
HHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PDIKRFMNELEQTEVKLAKNHIPFAIGILTGLKDNSTPIKTIEEQVEVVRKRNFAGVSFF
HHHHHHHHHHHHHHHHHHHCCCCEEEEEHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHH
FYESLWKWGKESENIRNKSFEEMFKHKTYRPYISG
HHHHHHHHCCCCCHHHCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SKSKSIYRIITLTLMAIFTTITFVLASNQISKSAQKTEIRGVWITNIDSEVLFSSSETK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHCCCCHHH
TAINRLANLNFNTLYPTIWQGGYTLYPSQVAQQVFGKSLDPETGLQGRDVLQEIISEGHE
HHHHHHHCCCCCCCCHHHHCCCEEECHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
KGLTIIPWFEFGFMAPADSELARLHPNWLTKRRDGTTIKMEGKYPRVWLNPFHPEVQQFI
CCCEEEEEHHHCCCCCCCCHHHHCCCHHHHCCCCCCEEEECCCCCEEECCCCCHHHHHHH
LDLVIEIVTKYDIDGIQFDDHFGLPSEFGYDDFTVKLYEKEFPGLLPSDDYKETFWVRWR
HHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCEEEEEEHHHCCCCCCCCCCCCEEEEEEE
ANKINNFMERVSKEIKAIKPDYIISVSPNPLHFALSAYLQDWFTWEREKWIDEIVLQVYR
HHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PDIKRFMNELEQTEVKLAKNHIPFAIGILTGLKDNSTPIKTIEEQVEVVRKRNFAGVSFF
HHHHHHHHHHHHHHHHHHHCCCCEEEEEHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHH
FYESLWKWGKESENIRNKSFEEMFKHKTYRPYISG
HHHHHHHHCCCCCHHHCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]