Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474032

Identifier: 113474032

GI number: 113474032

Start: 178603

End: 180135

Strand: Reverse

Name: 113474032

Synonym: Tery_0124

Alternate gene names: NA

Gene position: 180135-178603 (Counterclockwise)

Preceding gene: 113474033

Following gene: 113474031

Centisome position: 2.32

GC content: 37.9

Gene sequence:

>1533_bases
ATGTCGACTCAACAGTTTAAAAACAAAATATCTCCCACCTTAGAGAAAAACCCGATCTTAATTAATAATTGTCATTTAAC
TTCACACACAGAAAATAACTCCCAAACTTTTCTCGTTTCTCAAAACTCTAATTCTAGTCAACAATGTGCTTCCATTGACC
CTTTTAGTCAAGCAATTAGGTTTGCTACAAAAGCCGCAAACTTAGCTCAATATGCAAGAACCAAACAACAATGGGATAGA
GTAGCACAAGAGTGGGTGCAAGCAGTAGCTTGGATGCAAGCAGTGCCCCCAGAAAACCCTAGACGTGTTTTTGCTGAGAA
AAAAGTTGCTGAGTATATGAGAAACCTAGCTTATTCTCAACAACAAGCGGCTTCTGCTCCCTCTAAATTTAACCCTGTTT
CTTTCAATAGTAATATTCTTGATATCCAGTTAAAACTTTATTTATCTTACATTGCCACTATCGGTGTACCAGATGTTTTA
ATTGTTGGGAGTTCCCGTGCTTTACATGGGGTCGCCCCCCAACAACTACAACAATATTTAATGGCTAAAGGTTATCCTCG
GTTAAATATATTTAATTTTGGTATTAATGGGGCTACAGCTCAAGTAGTTGACTTTCAACTCCGACAACTTTTAAGCACTA
ACCAACTGCCAAAATTAATTATCTGGGCTGATGGAGTACGAGCTTTTAATAGTGGGCGAGTGGATCGAACTTATAATTCA
ATTATTGCTTCTGAGGGTAGAAGACTATTGCTTTCTGGCATTCGTCCCGAGTTACCTCAAGCTCAATCTAATTTTGCTTC
TACCTGTTATCAGTTTCCTCAACCCTATAACGTATTTTCACCCAGTACCAATTTTCCTTGGGATACATCGGTAGGGGAGA
CAATAGAGGTTAAGGATAGCCATATTAAATTAGGTAATTATATAAAATATTTCTATGAACCCATTGAAGTTCCCCATAAC
AGGTTTTCAAACCTTTATACTCCCGTTCCCAAATCAGTATTTTTGGAAAGGCCTATTAGGGAAAATTCCTCAAACTCAAC
CTCTTATACCCAAAACTATACTCTACCTGTACAAACAGTAGCGATCGCCAATGCTGCTAATGCCATTAACGCTAATGGTT
TTCTGGCAATAGATAGACAATTTAATCCTTCCTATTATTATCGACAACGACCTTATGTAGCAGGTCTTTACGATGGTGAC
TATGCCAGTTTTTATCTTGGAGGTACTCAAGGAGCAGCTTTAAATTCCCTTGTTAACTTTACTAAATCTCGAAATATTCC
TTTAGTATTTGTTAACTTACCTCTATCTGATAGTTATTTAGACTCTGTACGTTGGTCCGCTGAAAAAGAATTTGATTCGT
GGATGCAACGTAAAGCGAGAGAAAATGGCTTTAGGTTTCTGAACTTTAATTTATATCAGCCTCAACTAGCCAAAAATGAA
TACTTCTTTGATCCCAGTCATTTAAACCGTTATGGTGCTGGTGCTGTAGCTCGTTATCTTGCTGTCAGTGCTGAAATTGC
TTGGCCACGTTGA

Upstream 100 bases:

>100_bases
AAGATAGAAAATAAAACTAACAGTAGTAGATGGAATTCTAATTAATTTGCTTCAACGTTTTACAGTAACCATAACTTTGC
TCACCCTAACTGTTGGATGT

Downstream 100 bases:

>100_bases
ATAAATCATAACTCACCGTTAGTCTATATATCAAACCTAAAATTGTATATATCGTCCCAAACTCAGCCTGAATAGCAGTT
AGATGAACTTCAAATTATGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 510; Mature: 509

Protein sequence:

>510_residues
MSTQQFKNKISPTLEKNPILINNCHLTSHTENNSQTFLVSQNSNSSQQCASIDPFSQAIRFATKAANLAQYARTKQQWDR
VAQEWVQAVAWMQAVPPENPRRVFAEKKVAEYMRNLAYSQQQAASAPSKFNPVSFNSNILDIQLKLYLSYIATIGVPDVL
IVGSSRALHGVAPQQLQQYLMAKGYPRLNIFNFGINGATAQVVDFQLRQLLSTNQLPKLIIWADGVRAFNSGRVDRTYNS
IIASEGRRLLLSGIRPELPQAQSNFASTCYQFPQPYNVFSPSTNFPWDTSVGETIEVKDSHIKLGNYIKYFYEPIEVPHN
RFSNLYTPVPKSVFLERPIRENSSNSTSYTQNYTLPVQTVAIANAANAINANGFLAIDRQFNPSYYYRQRPYVAGLYDGD
YASFYLGGTQGAALNSLVNFTKSRNIPLVFVNLPLSDSYLDSVRWSAEKEFDSWMQRKARENGFRFLNFNLYQPQLAKNE
YFFDPSHLNRYGAGAVARYLAVSAEIAWPR

Sequences:

>Translated_510_residues
MSTQQFKNKISPTLEKNPILINNCHLTSHTENNSQTFLVSQNSNSSQQCASIDPFSQAIRFATKAANLAQYARTKQQWDR
VAQEWVQAVAWMQAVPPENPRRVFAEKKVAEYMRNLAYSQQQAASAPSKFNPVSFNSNILDIQLKLYLSYIATIGVPDVL
IVGSSRALHGVAPQQLQQYLMAKGYPRLNIFNFGINGATAQVVDFQLRQLLSTNQLPKLIIWADGVRAFNSGRVDRTYNS
IIASEGRRLLLSGIRPELPQAQSNFASTCYQFPQPYNVFSPSTNFPWDTSVGETIEVKDSHIKLGNYIKYFYEPIEVPHN
RFSNLYTPVPKSVFLERPIRENSSNSTSYTQNYTLPVQTVAIANAANAINANGFLAIDRQFNPSYYYRQRPYVAGLYDGD
YASFYLGGTQGAALNSLVNFTKSRNIPLVFVNLPLSDSYLDSVRWSAEKEFDSWMQRKARENGFRFLNFNLYQPQLAKNE
YFFDPSHLNRYGAGAVARYLAVSAEIAWPR
>Mature_509_residues
STQQFKNKISPTLEKNPILINNCHLTSHTENNSQTFLVSQNSNSSQQCASIDPFSQAIRFATKAANLAQYARTKQQWDRV
AQEWVQAVAWMQAVPPENPRRVFAEKKVAEYMRNLAYSQQQAASAPSKFNPVSFNSNILDIQLKLYLSYIATIGVPDVLI
VGSSRALHGVAPQQLQQYLMAKGYPRLNIFNFGINGATAQVVDFQLRQLLSTNQLPKLIIWADGVRAFNSGRVDRTYNSI
IASEGRRLLLSGIRPELPQAQSNFASTCYQFPQPYNVFSPSTNFPWDTSVGETIEVKDSHIKLGNYIKYFYEPIEVPHNR
FSNLYTPVPKSVFLERPIRENSSNSTSYTQNYTLPVQTVAIANAANAINANGFLAIDRQFNPSYYYRQRPYVAGLYDGDY
ASFYLGGTQGAALNSLVNFTKSRNIPLVFVNLPLSDSYLDSVRWSAEKEFDSWMQRKARENGFRFLNFNLYQPQLAKNEY
FFDPSHLNRYGAGAVARYLAVSAEIAWPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57772; Mature: 57640

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTQQFKNKISPTLEKNPILINNCHLTSHTENNSQTFLVSQNSNSSQQCASIDPFSQAIR
CCHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCHHCCCCHHHHHHH
FATKAANLAQYARTKQQWDRVAQEWVQAVAWMQAVPPENPRRVFAEKKVAEYMRNLAYSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
QQAASAPSKFNPVSFNSNILDIQLKLYLSYIATIGVPDVLIVGSSRALHGVAPQQLQQYL
HHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHH
MAKGYPRLNIFNFGINGATAQVVDFQLRQLLSTNQLPKLIIWADGVRAFNSGRVDRTYNS
HHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCHHHHHH
IIASEGRRLLLSGIRPELPQAQSNFASTCYQFPQPYNVFSPSTNFPWDTSVGETIEVKDS
HHHHCCCEEEHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECC
HIKLGNYIKYFYEPIEVPHNRFSNLYTPVPKSVFLERPIRENSSNSTSYTQNYTLPVQTV
EEEHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCEEEEECCCEEEE
AIANAANAINANGFLAIDRQFNPSYYYRQRPYVAGLYDGDYASFYLGGTQGAALNSLVNF
EECCCCCCCCCCCEEEEECCCCCCEEEECCCEEEEEECCCEEEEEECCCCCHHHHHHHHH
TKSRNIPLVFVNLPLSDSYLDSVRWSAEKEFDSWMQRKARENGFRFLNFNLYQPQLAKNE
HHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCC
YFFDPSHLNRYGAGAVARYLAVSAEIAWPR
CEECHHHHHHHCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
STQQFKNKISPTLEKNPILINNCHLTSHTENNSQTFLVSQNSNSSQQCASIDPFSQAIR
CHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCHHCCCCHHHHHHH
FATKAANLAQYARTKQQWDRVAQEWVQAVAWMQAVPPENPRRVFAEKKVAEYMRNLAYSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
QQAASAPSKFNPVSFNSNILDIQLKLYLSYIATIGVPDVLIVGSSRALHGVAPQQLQQYL
HHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHH
MAKGYPRLNIFNFGINGATAQVVDFQLRQLLSTNQLPKLIIWADGVRAFNSGRVDRTYNS
HHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCHHHHHH
IIASEGRRLLLSGIRPELPQAQSNFASTCYQFPQPYNVFSPSTNFPWDTSVGETIEVKDS
HHHHCCCEEEHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECC
HIKLGNYIKYFYEPIEVPHNRFSNLYTPVPKSVFLERPIRENSSNSTSYTQNYTLPVQTV
EEEHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCEEEEECCCEEEE
AIANAANAINANGFLAIDRQFNPSYYYRQRPYVAGLYDGDYASFYLGGTQGAALNSLVNF
EECCCCCCCCCCCEEEEECCCCCCEEEECCCEEEEEECCCEEEEEECCCCCHHHHHHHHH
TKSRNIPLVFVNLPLSDSYLDSVRWSAEKEFDSWMQRKARENGFRFLNFNLYQPQLAKNE
HHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCC
YFFDPSHLNRYGAGAVARYLAVSAEIAWPR
CEECHHHHHHHCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA