| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474010
Identifier: 113474010
GI number: 113474010
Start: 129597
End: 129836
Strand: Direct
Name: 113474010
Synonym: Tery_0093
Alternate gene names: NA
Gene position: 129597-129836 (Clockwise)
Preceding gene: 113474009
Following gene: 113474011
Centisome position: 1.67
GC content: 27.92
Gene sequence:
>240_bases TTGACAATATCTCAGGTTGGGTGCAATACTAATATTATTGAAAAAAAAGGTAAATATCCTTGGCATTATGCTCGAAATAT TATTACAGCTTTGTTGTATTTGAACAAAGTTGATGGAGGAGAAATTGCATTTTATCCTAATTATAGAATTATTTTACCCA AAGCTAAATTTTCTAGATTTCAAAAAGTGATAGATAGGGTACAAAAATTTAGTTTTTTTCGTCATACCTTTGGCAAATAA
Upstream 100 bases:
>100_bases GATATGGAAAAATAATTCAGCCTCAGATTCCAAAATCTCAAAAACTATGCGAAACTGTGAATCAAGTTATTAAAAATCTA ACAAATAAACAACTTTTTCC
Downstream 100 bases:
>100_bases ATTATTATTATACATCAGCCTGGTTTACGGTTAGTTATGATGGGTGATAAATGTCTACATATTGTTTCTCCGGTAACAGA AGCAAAGGGGTAAATTAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MTISQVGCNTNIIEKKGKYPWHYARNIITALLYLNKVDGGEIAFYPNYRIILPKAKFSRFQKVIDRVQKFSFFRHTFGK
Sequences:
>Translated_79_residues MTISQVGCNTNIIEKKGKYPWHYARNIITALLYLNKVDGGEIAFYPNYRIILPKAKFSRFQKVIDRVQKFSFFRHTFGK >Mature_78_residues TISQVGCNTNIIEKKGKYPWHYARNIITALLYLNKVDGGEIAFYPNYRIILPKAKFSRFQKVIDRVQKFSFFRHTFGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9331; Mature: 9200
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISQVGCNTNIIEKKGKYPWHYARNIITALLYLNKVDGGEIAFYPNYRIILPKAKFSRF CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEECCHHHHHH QKVIDRVQKFSFFRHTFGK HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TISQVGCNTNIIEKKGKYPWHYARNIITALLYLNKVDGGEIAFYPNYRIILPKAKFSRF CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEECCHHHHHH QKVIDRVQKFSFFRHTFGK HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA