Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474008

Identifier: 113474008

GI number: 113474008

Start: 125895

End: 127244

Strand: Direct

Name: 113474008

Synonym: Tery_0090

Alternate gene names: NA

Gene position: 125895-127244 (Clockwise)

Preceding gene: 113474007

Following gene: 113474009

Centisome position: 1.62

GC content: 34.07

Gene sequence:

>1350_bases
ATGAACAGTATAAAATCTACTACTCCACCAAAACTTGATAGTTGTCATGCTGACCTTGATTTTCGCCAATATATCCTTGA
ATATTTTAAGAATGCTTGGGAAATTGAAGATCTTTTAATGCATAGTTTAGTGGGAGAAGAAACGTTTTATTCAAAACCCG
ATCCTTTGAGAAATCCTCTAATTTTTTATCTCGGACATACGGCGGTTTTTTACATCAATAAATTAGTTTTCGTGGGATTA
TTAGAAAAGCCTATCAACTTTAACTATGAAAGATTATTTGAGTTAGGAGTAGATCCAAAAAAATCAGAAGAGTTAGATCA
GGCGATCGCTCACATTAACTGGCCTCAACTTGAAGATGTTTGGCAGTATCGAAAAAAAGTCTATCAAAGCGTTATAAGCC
TAATTGAGAAAACCCCTTTAAATCTACCCATCCATCAAGATCATCCTCTTTGGGCATTGATGATGGGTATTGAGCATCAA
CGTATTCATATTGAGACTTCTTCAATGTTGTTTCGGCAACTACCGACTGAAAAACTAAGACGTCCTAGTAATTGGCAATA
TGCTCCTACTAATGGTGAGGTGGTTGAGAATGAGATGATAGAAGTTTCTGGTGGAGTAGTTAAACTGGGTAAGCCAGAAG
ATGATCCTACTTATGGTTGGGATATTGAATACGGCGATCGCCAAGTTAAAGTTGCACCTTTTGTTGCTAGTAAATATTTA
ATTACTAATGCAGAATTTTTAGAATTTGTCAAGGGTGGTGGTTACGAAAATCAAGATTATTGGACTCAAGAATCTTGGCA
TTGGAAAAATGAAAATAATATCAAACATCCAAAATTTTGGATACCTGAAAATGGTACATCTATATATAGATATCGAGCCA
TGTTTGATGCAATTAATTTACCTTTAAATTGGCCTGTGGAAGTCAATCATTATGAAGCAATGGCTTATTGTAGTTGGAGA
GGTAAAAATACTAGGTTAATGAGTGAAGCAGAATATAATTTAGCAACTTATGGTAATGGTAGAAAAGTAGAGGTAGATAA
TTACAATTTGAATTTAAAATTTGGTTCTCCAACTCCAGTTGGTTTATTAGAAACTGCAAAAAATGAATCAGGATTATATG
ATTTACGGGGTAATGTTTGGGAATGGTTAAGTGATAATTTGAATCCTCTTTCAGGATATAAAACTCATCAACTATATGAA
AATTATTCTGCTCCGTTTTTTAATAGTAGACATAATATGATGTTAGGAGGATGTTGGATAACTAGCGGTACAGAAGCTTT
CAGATATTATCGTAATTGGTTCCGACCTAACTTTTATCAGCATGTTGGTTTTAGAATAGTTCAGGGATAG

Upstream 100 bases:

>100_bases
AATGAATCTATAAATTCCATGAAATAGTATAATTATCTGGAATTTAAATATCTTAAATTGCAAAATTTAGAGATTAAATT
TTTTTCTATTTATAACAATT

Downstream 100 bases:

>100_bases
AAAGATGTATAGCGTTTCTCAGACTAACGAGGTAGACCTATCTTTACAGAAGTGTTGAATGTTTTAATGTTGAACTGTAT
CTCACTATCTTGAAAAGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MNSIKSTTPPKLDSCHADLDFRQYILEYFKNAWEIEDLLMHSLVGEETFYSKPDPLRNPLIFYLGHTAVFYINKLVFVGL
LEKPINFNYERLFELGVDPKKSEELDQAIAHINWPQLEDVWQYRKKVYQSVISLIEKTPLNLPIHQDHPLWALMMGIEHQ
RIHIETSSMLFRQLPTEKLRRPSNWQYAPTNGEVVENEMIEVSGGVVKLGKPEDDPTYGWDIEYGDRQVKVAPFVASKYL
ITNAEFLEFVKGGGYENQDYWTQESWHWKNENNIKHPKFWIPENGTSIYRYRAMFDAINLPLNWPVEVNHYEAMAYCSWR
GKNTRLMSEAEYNLATYGNGRKVEVDNYNLNLKFGSPTPVGLLETAKNESGLYDLRGNVWEWLSDNLNPLSGYKTHQLYE
NYSAPFFNSRHNMMLGGCWITSGTEAFRYYRNWFRPNFYQHVGFRIVQG

Sequences:

>Translated_449_residues
MNSIKSTTPPKLDSCHADLDFRQYILEYFKNAWEIEDLLMHSLVGEETFYSKPDPLRNPLIFYLGHTAVFYINKLVFVGL
LEKPINFNYERLFELGVDPKKSEELDQAIAHINWPQLEDVWQYRKKVYQSVISLIEKTPLNLPIHQDHPLWALMMGIEHQ
RIHIETSSMLFRQLPTEKLRRPSNWQYAPTNGEVVENEMIEVSGGVVKLGKPEDDPTYGWDIEYGDRQVKVAPFVASKYL
ITNAEFLEFVKGGGYENQDYWTQESWHWKNENNIKHPKFWIPENGTSIYRYRAMFDAINLPLNWPVEVNHYEAMAYCSWR
GKNTRLMSEAEYNLATYGNGRKVEVDNYNLNLKFGSPTPVGLLETAKNESGLYDLRGNVWEWLSDNLNPLSGYKTHQLYE
NYSAPFFNSRHNMMLGGCWITSGTEAFRYYRNWFRPNFYQHVGFRIVQG
>Mature_449_residues
MNSIKSTTPPKLDSCHADLDFRQYILEYFKNAWEIEDLLMHSLVGEETFYSKPDPLRNPLIFYLGHTAVFYINKLVFVGL
LEKPINFNYERLFELGVDPKKSEELDQAIAHINWPQLEDVWQYRKKVYQSVISLIEKTPLNLPIHQDHPLWALMMGIEHQ
RIHIETSSMLFRQLPTEKLRRPSNWQYAPTNGEVVENEMIEVSGGVVKLGKPEDDPTYGWDIEYGDRQVKVAPFVASKYL
ITNAEFLEFVKGGGYENQDYWTQESWHWKNENNIKHPKFWIPENGTSIYRYRAMFDAINLPLNWPVEVNHYEAMAYCSWR
GKNTRLMSEAEYNLATYGNGRKVEVDNYNLNLKFGSPTPVGLLETAKNESGLYDLRGNVWEWLSDNLNPLSGYKTHQLYE
NYSAPFFNSRHNMMLGGCWITSGTEAFRYYRNWFRPNFYQHVGFRIVQG

Specific function: Unknown

COG id: COG1262

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52740; Mature: 52740

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSIKSTTPPKLDSCHADLDFRQYILEYFKNAWEIEDLLMHSLVGEETFYSKPDPLRNPL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCHHCCCCCCCCCCCE
IFYLGHTAVFYINKLVFVGLLEKPINFNYERLFELGVDPKKSEELDQAIAHINWPQLEDV
EEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHH
WQYRKKVYQSVISLIEKTPLNLPIHQDHPLWALMMGIEHQRIHIETSSMLFRQLPTEKLR
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCEEEEEEHHHHHHHHCCHHHHC
RPSNWQYAPTNGEVVENEMIEVSGGVVKLGKPEDDPTYGWDIEYGDRQVKVAPFVASKYL
CCCCCCCCCCCCCEECCCEEEECCCEEECCCCCCCCCCCCEEEECCCEEEEECEEECHHE
ITNAEFLEFVKGGGYENQDYWTQESWHWKNENNIKHPKFWIPENGTSIYRYRAMFDAINL
ECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEHHHHHHHHCC
PLNWPVEVNHYEAMAYCSWRGKNTRLMSEAEYNLATYGNGRKVEVDNYNLNLKFGSPTPV
CCCCCEEECCEEEEEEEEECCCCCEEECCCCCCEEECCCCCEEEECCEEEEEEECCCCCC
GLLETAKNESGLYDLRGNVWEWLSDNLNPLSGYKTHQLYENYSAPFFNSRHNMMLGGCWI
HHHHHCCCCCCEEECCCCHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEEEE
TSGTEAFRYYRNWFRPNFYQHVGFRIVQG
CCCHHHHHHHHHHCCCCHHHHCCEEEECC
>Mature Secondary Structure
MNSIKSTTPPKLDSCHADLDFRQYILEYFKNAWEIEDLLMHSLVGEETFYSKPDPLRNPL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCHHCCCCCCCCCCCE
IFYLGHTAVFYINKLVFVGLLEKPINFNYERLFELGVDPKKSEELDQAIAHINWPQLEDV
EEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHH
WQYRKKVYQSVISLIEKTPLNLPIHQDHPLWALMMGIEHQRIHIETSSMLFRQLPTEKLR
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCEEEEEEHHHHHHHHCCHHHHC
RPSNWQYAPTNGEVVENEMIEVSGGVVKLGKPEDDPTYGWDIEYGDRQVKVAPFVASKYL
CCCCCCCCCCCCCEECCCEEEECCCEEECCCCCCCCCCCCEEEECCCEEEEECEEECHHE
ITNAEFLEFVKGGGYENQDYWTQESWHWKNENNIKHPKFWIPENGTSIYRYRAMFDAINL
ECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEHHHHHHHHCC
PLNWPVEVNHYEAMAYCSWRGKNTRLMSEAEYNLATYGNGRKVEVDNYNLNLKFGSPTPV
CCCCCEEECCEEEEEEEEECCCCCEEECCCCCCEEECCCCCEEEECCEEEEEEECCCCCC
GLLETAKNESGLYDLRGNVWEWLSDNLNPLSGYKTHQLYENYSAPFFNSRHNMMLGGCWI
HHHHHCCCCCCEEECCCCHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEEEE
TSGTEAFRYYRNWFRPNFYQHVGFRIVQG
CCCHHHHHHHHHHCCCCHHHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA