Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474004

Identifier: 113474004

GI number: 113474004

Start: 116114

End: 116977

Strand: Direct

Name: 113474004

Synonym: Tery_0085

Alternate gene names: NA

Gene position: 116114-116977 (Clockwise)

Preceding gene: 113473993

Following gene: 113474005

Centisome position: 1.5

GC content: 30.67

Gene sequence:

>864_bases
ATGAAAAAAAGTATAAAACCAAGCTATAAACTACACAAAAATTTTCGCTTACCAATGGGATTTACTCCAGAAAATTTTGA
CTCTGGAATTACATATCAAGCTCAAGAAAAAGATACTTTTATTGTTACTTATCCTAAATGCGGAACAACTTGGACTCAAC
ATATTATTTGGATGTTATCCCACGATGGAAAACCATTACCTTTAGATAAAAATATTAATTTAGAAGTTCCTCATTTGGAA
GAAGTCGGAGGTGATTTTGTTAAATATTTATCGAAACCTCGTTTTATAAAAACTCATTTAACTTATAATTTAACTCCCTA
TAATCCTGATACAAAATACATTTATGTAGCTCGTAATCCTTTTGACTGTGCTGTTTCTTTTTATTATCATACTCAAGGAT
TTATCAAACATTATGATTTTGCTGAAGGTACATTTGATGATTTTTTTGAATGTTTTATTACTGGAGAAGTAGACTGGGGA
GATTACTTCGATCATTTGCTTTCTTGGGTTCAACATAAAAATGATCAAAATGTTCTGTTTCTAACTTATGAATCTATGAA
AAATGACCCGAAAATGAATATTATTGCTATGGCAAAATTTTTAGGTGATAATTATCTAGAAAAAATCGAAAATCTACAAA
TTCTAGAAAGCATTCTTCATCATACAAGTTTTACTAGTATGAGCCAAAATCAAAGTCGTTGGTCTAGTCAACGTCCTGTT
AATATGACTCCATTTATTCGTCAAGGAAAGGTGGGAGATTGGAGGTCACATTTTTCAGTTTCTCAAACTCAGAGATTAAG
TCAAAAATTGAGGATGAAAACTGCTGGTACTGAAGCTGAAAATTTATGGCAAATTCCTGAATAG

Upstream 100 bases:

>100_bases
TTCTGACTTGAACTACAATTATAAATTTATAGTCAAAATATGATCAAAAAAATGCTTTGTAAACTACTAGTAAATTTGTT
ATAAACAGGAGCTTGCTTTG

Downstream 100 bases:

>100_bases
TTATGATTTTTATTCATAGAAAAGTAAGGTAATAATAAATTGTATTTTTCAGTTTATTAAACTCAGAGATTAAATCAAAG
GTTGAGGATTATAAATGCTG

Product: sulfotransferase

Products: NA

Alternate protein names: Sulfotransferase Domain Superfamily Protein; Alcohol Sulfotransferase; Glycolipid Sulfotransferase

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MKKSIKPSYKLHKNFRLPMGFTPENFDSGITYQAQEKDTFIVTYPKCGTTWTQHIIWMLSHDGKPLPLDKNINLEVPHLE
EVGGDFVKYLSKPRFIKTHLTYNLTPYNPDTKYIYVARNPFDCAVSFYYHTQGFIKHYDFAEGTFDDFFECFITGEVDWG
DYFDHLLSWVQHKNDQNVLFLTYESMKNDPKMNIIAMAKFLGDNYLEKIENLQILESILHHTSFTSMSQNQSRWSSQRPV
NMTPFIRQGKVGDWRSHFSVSQTQRLSQKLRMKTAGTEAENLWQIPE

Sequences:

>Translated_287_residues
MKKSIKPSYKLHKNFRLPMGFTPENFDSGITYQAQEKDTFIVTYPKCGTTWTQHIIWMLSHDGKPLPLDKNINLEVPHLE
EVGGDFVKYLSKPRFIKTHLTYNLTPYNPDTKYIYVARNPFDCAVSFYYHTQGFIKHYDFAEGTFDDFFECFITGEVDWG
DYFDHLLSWVQHKNDQNVLFLTYESMKNDPKMNIIAMAKFLGDNYLEKIENLQILESILHHTSFTSMSQNQSRWSSQRPV
NMTPFIRQGKVGDWRSHFSVSQTQRLSQKLRMKTAGTEAENLWQIPE
>Mature_287_residues
MKKSIKPSYKLHKNFRLPMGFTPENFDSGITYQAQEKDTFIVTYPKCGTTWTQHIIWMLSHDGKPLPLDKNINLEVPHLE
EVGGDFVKYLSKPRFIKTHLTYNLTPYNPDTKYIYVARNPFDCAVSFYYHTQGFIKHYDFAEGTFDDFFECFITGEVDWG
DYFDHLLSWVQHKNDQNVLFLTYESMKNDPKMNIIAMAKFLGDNYLEKIENLQILESILHHTSFTSMSQNQSRWSSQRPV
NMTPFIRQGKVGDWRSHFSVSQTQRLSQKLRMKTAGTEAENLWQIPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI28830308, Length=272, Percent_Identity=36.3970588235294, Blast_Score=165, Evalue=5e-41,
Organism=Homo sapiens, GI4507305, Length=271, Percent_Identity=35.7933579335793, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI56847626, Length=275, Percent_Identity=34.9090909090909, Blast_Score=158, Evalue=5e-39,
Organism=Homo sapiens, GI29550928, Length=292, Percent_Identity=31.5068493150685, Blast_Score=146, Evalue=2e-35,
Organism=Homo sapiens, GI29029530, Length=282, Percent_Identity=32.2695035460993, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI29550921, Length=261, Percent_Identity=34.0996168582375, Blast_Score=143, Evalue=2e-34,
Organism=Homo sapiens, GI10835035, Length=261, Percent_Identity=34.0996168582375, Blast_Score=143, Evalue=2e-34,
Organism=Homo sapiens, GI62868225, Length=261, Percent_Identity=34.0996168582375, Blast_Score=143, Evalue=2e-34,
Organism=Homo sapiens, GI62868223, Length=261, Percent_Identity=34.0996168582375, Blast_Score=143, Evalue=2e-34,
Organism=Homo sapiens, GI4885617, Length=258, Percent_Identity=34.1085271317829, Blast_Score=142, Evalue=4e-34,
Organism=Homo sapiens, GI29550893, Length=266, Percent_Identity=34.9624060150376, Blast_Score=142, Evalue=5e-34,
Organism=Homo sapiens, GI4507303, Length=266, Percent_Identity=34.9624060150376, Blast_Score=142, Evalue=5e-34,
Organism=Homo sapiens, GI29540539, Length=264, Percent_Identity=34.0909090909091, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI29540537, Length=264, Percent_Identity=34.0909090909091, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI29540535, Length=264, Percent_Identity=34.0909090909091, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI29540531, Length=264, Percent_Identity=34.0909090909091, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI31563386, Length=256, Percent_Identity=30.859375, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI31563388, Length=256, Percent_Identity=30.859375, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI74024919, Length=269, Percent_Identity=33.0855018587361, Blast_Score=125, Evalue=5e-29,
Organism=Homo sapiens, GI7657633, Length=270, Percent_Identity=31.8518518518519, Blast_Score=125, Evalue=6e-29,
Organism=Homo sapiens, GI29540545, Length=279, Percent_Identity=31.1827956989247, Blast_Score=122, Evalue=6e-28,
Organism=Homo sapiens, GI29540543, Length=168, Percent_Identity=33.9285714285714, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17566452, Length=269, Percent_Identity=39.0334572490706, Blast_Score=206, Evalue=1e-53,
Organism=Drosophila melanogaster, GI24645281, Length=254, Percent_Identity=29.9212598425197, Blast_Score=133, Evalue=1e-31,
Organism=Drosophila melanogaster, GI221468277, Length=277, Percent_Identity=29.9638989169675, Blast_Score=110, Evalue=9e-25,
Organism=Drosophila melanogaster, GI221468280, Length=261, Percent_Identity=28.735632183908, Blast_Score=102, Evalue=3e-22,
Organism=Drosophila melanogaster, GI22026942, Length=261, Percent_Identity=28.735632183908, Blast_Score=102, Evalue=3e-22,
Organism=Drosophila melanogaster, GI24653521, Length=243, Percent_Identity=29.6296296296296, Blast_Score=92, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33757; Mature: 33757

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSIKPSYKLHKNFRLPMGFTPENFDSGITYQAQEKDTFIVTYPKCGTTWTQHIIWMLS
CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHEEEEEE
HDGKPLPLDKNINLEVPHLEEVGGDFVKYLSKPRFIKTHLTYNLTPYNPDTKYIYVARNP
CCCCCCCCCCCCCEECCCHHHHCHHHHHHHCCCCEEEEEEEEEECCCCCCCCEEEEECCC
FDCAVSFYYHTQGFIKHYDFAEGTFDDFFECFITGEVDWGDYFDHLLSWVQHKNDQNVLF
CCEEEEEEEECCCHHHHCCCCCCCHHHHHHEEEECCCCHHHHHHHHHHHHHCCCCCCEEE
LTYESMKNDPKMNIIAMAKFLGDNYLEKIENLQILESILHHTSFTSMSQNQSRWSSQRPV
EEEHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCC
NMTPFIRQGKVGDWRSHFSVSQTQRLSQKLRMKTAGTEAENLWQIPE
CCCCCHHCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCHHHCCCCCC
>Mature Secondary Structure
MKKSIKPSYKLHKNFRLPMGFTPENFDSGITYQAQEKDTFIVTYPKCGTTWTQHIIWMLS
CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHEEEEEE
HDGKPLPLDKNINLEVPHLEEVGGDFVKYLSKPRFIKTHLTYNLTPYNPDTKYIYVARNP
CCCCCCCCCCCCCEECCCHHHHCHHHHHHHCCCCEEEEEEEEEECCCCCCCCEEEEECCC
FDCAVSFYYHTQGFIKHYDFAEGTFDDFFECFITGEVDWGDYFDHLLSWVQHKNDQNVLF
CCEEEEEEEECCCHHHHCCCCCCCHHHHHHEEEECCCCHHHHHHHHHHHHHCCCCCCEEE
LTYESMKNDPKMNIIAMAKFLGDNYLEKIENLQILESILHHTSFTSMSQNQSRWSSQRPV
EEEHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCC
NMTPFIRQGKVGDWRSHFSVSQTQRLSQKLRMKTAGTEAENLWQIPE
CCCCCHHCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA