| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474004
Identifier: 113474004
GI number: 113474004
Start: 116114
End: 116977
Strand: Direct
Name: 113474004
Synonym: Tery_0085
Alternate gene names: NA
Gene position: 116114-116977 (Clockwise)
Preceding gene: 113473993
Following gene: 113474005
Centisome position: 1.5
GC content: 30.67
Gene sequence:
>864_bases ATGAAAAAAAGTATAAAACCAAGCTATAAACTACACAAAAATTTTCGCTTACCAATGGGATTTACTCCAGAAAATTTTGA CTCTGGAATTACATATCAAGCTCAAGAAAAAGATACTTTTATTGTTACTTATCCTAAATGCGGAACAACTTGGACTCAAC ATATTATTTGGATGTTATCCCACGATGGAAAACCATTACCTTTAGATAAAAATATTAATTTAGAAGTTCCTCATTTGGAA GAAGTCGGAGGTGATTTTGTTAAATATTTATCGAAACCTCGTTTTATAAAAACTCATTTAACTTATAATTTAACTCCCTA TAATCCTGATACAAAATACATTTATGTAGCTCGTAATCCTTTTGACTGTGCTGTTTCTTTTTATTATCATACTCAAGGAT TTATCAAACATTATGATTTTGCTGAAGGTACATTTGATGATTTTTTTGAATGTTTTATTACTGGAGAAGTAGACTGGGGA GATTACTTCGATCATTTGCTTTCTTGGGTTCAACATAAAAATGATCAAAATGTTCTGTTTCTAACTTATGAATCTATGAA AAATGACCCGAAAATGAATATTATTGCTATGGCAAAATTTTTAGGTGATAATTATCTAGAAAAAATCGAAAATCTACAAA TTCTAGAAAGCATTCTTCATCATACAAGTTTTACTAGTATGAGCCAAAATCAAAGTCGTTGGTCTAGTCAACGTCCTGTT AATATGACTCCATTTATTCGTCAAGGAAAGGTGGGAGATTGGAGGTCACATTTTTCAGTTTCTCAAACTCAGAGATTAAG TCAAAAATTGAGGATGAAAACTGCTGGTACTGAAGCTGAAAATTTATGGCAAATTCCTGAATAG
Upstream 100 bases:
>100_bases TTCTGACTTGAACTACAATTATAAATTTATAGTCAAAATATGATCAAAAAAATGCTTTGTAAACTACTAGTAAATTTGTT ATAAACAGGAGCTTGCTTTG
Downstream 100 bases:
>100_bases TTATGATTTTTATTCATAGAAAAGTAAGGTAATAATAAATTGTATTTTTCAGTTTATTAAACTCAGAGATTAAATCAAAG GTTGAGGATTATAAATGCTG
Product: sulfotransferase
Products: NA
Alternate protein names: Sulfotransferase Domain Superfamily Protein; Alcohol Sulfotransferase; Glycolipid Sulfotransferase
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MKKSIKPSYKLHKNFRLPMGFTPENFDSGITYQAQEKDTFIVTYPKCGTTWTQHIIWMLSHDGKPLPLDKNINLEVPHLE EVGGDFVKYLSKPRFIKTHLTYNLTPYNPDTKYIYVARNPFDCAVSFYYHTQGFIKHYDFAEGTFDDFFECFITGEVDWG DYFDHLLSWVQHKNDQNVLFLTYESMKNDPKMNIIAMAKFLGDNYLEKIENLQILESILHHTSFTSMSQNQSRWSSQRPV NMTPFIRQGKVGDWRSHFSVSQTQRLSQKLRMKTAGTEAENLWQIPE
Sequences:
>Translated_287_residues MKKSIKPSYKLHKNFRLPMGFTPENFDSGITYQAQEKDTFIVTYPKCGTTWTQHIIWMLSHDGKPLPLDKNINLEVPHLE EVGGDFVKYLSKPRFIKTHLTYNLTPYNPDTKYIYVARNPFDCAVSFYYHTQGFIKHYDFAEGTFDDFFECFITGEVDWG DYFDHLLSWVQHKNDQNVLFLTYESMKNDPKMNIIAMAKFLGDNYLEKIENLQILESILHHTSFTSMSQNQSRWSSQRPV NMTPFIRQGKVGDWRSHFSVSQTQRLSQKLRMKTAGTEAENLWQIPE >Mature_287_residues MKKSIKPSYKLHKNFRLPMGFTPENFDSGITYQAQEKDTFIVTYPKCGTTWTQHIIWMLSHDGKPLPLDKNINLEVPHLE EVGGDFVKYLSKPRFIKTHLTYNLTPYNPDTKYIYVARNPFDCAVSFYYHTQGFIKHYDFAEGTFDDFFECFITGEVDWG DYFDHLLSWVQHKNDQNVLFLTYESMKNDPKMNIIAMAKFLGDNYLEKIENLQILESILHHTSFTSMSQNQSRWSSQRPV NMTPFIRQGKVGDWRSHFSVSQTQRLSQKLRMKTAGTEAENLWQIPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI28830308, Length=272, Percent_Identity=36.3970588235294, Blast_Score=165, Evalue=5e-41, Organism=Homo sapiens, GI4507305, Length=271, Percent_Identity=35.7933579335793, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI56847626, Length=275, Percent_Identity=34.9090909090909, Blast_Score=158, Evalue=5e-39, Organism=Homo sapiens, GI29550928, Length=292, Percent_Identity=31.5068493150685, Blast_Score=146, Evalue=2e-35, Organism=Homo sapiens, GI29029530, Length=282, Percent_Identity=32.2695035460993, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI29550921, Length=261, Percent_Identity=34.0996168582375, Blast_Score=143, Evalue=2e-34, Organism=Homo sapiens, GI10835035, Length=261, Percent_Identity=34.0996168582375, Blast_Score=143, Evalue=2e-34, Organism=Homo sapiens, GI62868225, Length=261, Percent_Identity=34.0996168582375, Blast_Score=143, Evalue=2e-34, Organism=Homo sapiens, GI62868223, Length=261, Percent_Identity=34.0996168582375, Blast_Score=143, Evalue=2e-34, Organism=Homo sapiens, GI4885617, Length=258, Percent_Identity=34.1085271317829, Blast_Score=142, Evalue=4e-34, Organism=Homo sapiens, GI29550893, Length=266, Percent_Identity=34.9624060150376, Blast_Score=142, Evalue=5e-34, Organism=Homo sapiens, GI4507303, Length=266, Percent_Identity=34.9624060150376, Blast_Score=142, Evalue=5e-34, Organism=Homo sapiens, GI29540539, Length=264, Percent_Identity=34.0909090909091, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI29540537, Length=264, Percent_Identity=34.0909090909091, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI29540535, Length=264, Percent_Identity=34.0909090909091, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI29540531, Length=264, Percent_Identity=34.0909090909091, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI31563386, Length=256, Percent_Identity=30.859375, Blast_Score=130, Evalue=1e-30, Organism=Homo sapiens, GI31563388, Length=256, Percent_Identity=30.859375, Blast_Score=130, Evalue=1e-30, Organism=Homo sapiens, GI74024919, Length=269, Percent_Identity=33.0855018587361, Blast_Score=125, Evalue=5e-29, Organism=Homo sapiens, GI7657633, Length=270, Percent_Identity=31.8518518518519, Blast_Score=125, Evalue=6e-29, Organism=Homo sapiens, GI29540545, Length=279, Percent_Identity=31.1827956989247, Blast_Score=122, Evalue=6e-28, Organism=Homo sapiens, GI29540543, Length=168, Percent_Identity=33.9285714285714, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17566452, Length=269, Percent_Identity=39.0334572490706, Blast_Score=206, Evalue=1e-53, Organism=Drosophila melanogaster, GI24645281, Length=254, Percent_Identity=29.9212598425197, Blast_Score=133, Evalue=1e-31, Organism=Drosophila melanogaster, GI221468277, Length=277, Percent_Identity=29.9638989169675, Blast_Score=110, Evalue=9e-25, Organism=Drosophila melanogaster, GI221468280, Length=261, Percent_Identity=28.735632183908, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI22026942, Length=261, Percent_Identity=28.735632183908, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI24653521, Length=243, Percent_Identity=29.6296296296296, Blast_Score=92, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33757; Mature: 33757
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSIKPSYKLHKNFRLPMGFTPENFDSGITYQAQEKDTFIVTYPKCGTTWTQHIIWMLS CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHEEEEEE HDGKPLPLDKNINLEVPHLEEVGGDFVKYLSKPRFIKTHLTYNLTPYNPDTKYIYVARNP CCCCCCCCCCCCCEECCCHHHHCHHHHHHHCCCCEEEEEEEEEECCCCCCCCEEEEECCC FDCAVSFYYHTQGFIKHYDFAEGTFDDFFECFITGEVDWGDYFDHLLSWVQHKNDQNVLF CCEEEEEEEECCCHHHHCCCCCCCHHHHHHEEEECCCCHHHHHHHHHHHHHCCCCCCEEE LTYESMKNDPKMNIIAMAKFLGDNYLEKIENLQILESILHHTSFTSMSQNQSRWSSQRPV EEEHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCC NMTPFIRQGKVGDWRSHFSVSQTQRLSQKLRMKTAGTEAENLWQIPE CCCCCHHCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCHHHCCCCCC >Mature Secondary Structure MKKSIKPSYKLHKNFRLPMGFTPENFDSGITYQAQEKDTFIVTYPKCGTTWTQHIIWMLS CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHEEEEEE HDGKPLPLDKNINLEVPHLEEVGGDFVKYLSKPRFIKTHLTYNLTPYNPDTKYIYVARNP CCCCCCCCCCCCCEECCCHHHHCHHHHHHHCCCCEEEEEEEEEECCCCCCCCEEEEECCC FDCAVSFYYHTQGFIKHYDFAEGTFDDFFECFITGEVDWGDYFDHLLSWVQHKNDQNVLF CCEEEEEEEECCCHHHHCCCCCCCHHHHHHEEEECCCCHHHHHHHHHHHHHCCCCCCEEE LTYESMKNDPKMNIIAMAKFLGDNYLEKIENLQILESILHHTSFTSMSQNQSRWSSQRPV EEEHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCC NMTPFIRQGKVGDWRSHFSVSQTQRLSQKLRMKTAGTEAENLWQIPE CCCCCHHCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA