| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113473976
Identifier: 113473976
GI number: 113473976
Start: 73445
End: 73846
Strand: Reverse
Name: 113473976
Synonym: Tery_0049
Alternate gene names: NA
Gene position: 73846-73445 (Counterclockwise)
Preceding gene: 113473979
Following gene: 113473973
Centisome position: 0.95
GC content: 27.61
Gene sequence:
>402_bases ATGTATAAAGTCTCCCAAATGAATCCAACTTTAGAATATATTTATAATCATCCAAAAGAAACAAAAAGAATTATTGGCAT TACTTATGAACAGCTAATAAAATTAATAGCAAAGGCCCAAGTAATAGAATCAGAGAAAAAGGAGGCGATCGCCAAAACAG AAAAAAGATTAATTAAAGCAGGTGGAGTCAGAAAAAAGAATTTAACAAAGGAAGAAGAAATAATTTTAACGTTATTTTAT TTACATCAAATACCAACTTTTCAAACATTAGGAATTAACTTTGGTATAAGTGAATCAAGTGCTAATAATATTTTTCATTA CTGGATAGATATTCTCAGAGAATTACTGCCAGCAAGTTTATTAGAACAAGTAAAAAAAAAGAAAATGAATTGGAATGGGT AA
Upstream 100 bases:
>100_bases CCTAAATGGCTTAATGCTTCACTTTGGGTGTTAGGGTTGGAGATTTTCTTCATTAAACATCTCCAAAATAGAAAATAAGG TAAAATTATCAAAACCATTT
Downstream 100 bases:
>100_bases AGGAGATATTAACAGAATTATAATTAATTGTAGATAGTACAGAACAAAGTATAGAAAGACCAAGTGAATATAAAGACCAA GAAAAATATCAAATATGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MYKVSQMNPTLEYIYNHPKETKRIIGITYEQLIKLIAKAQVIESEKKEAIAKTEKRLIKAGGVRKKNLTKEEEIILTLFY LHQIPTFQTLGINFGISESSANNIFHYWIDILRELLPASLLEQVKKKKMNWNG
Sequences:
>Translated_133_residues MYKVSQMNPTLEYIYNHPKETKRIIGITYEQLIKLIAKAQVIESEKKEAIAKTEKRLIKAGGVRKKNLTKEEEIILTLFY LHQIPTFQTLGINFGISESSANNIFHYWIDILRELLPASLLEQVKKKKMNWNG >Mature_133_residues MYKVSQMNPTLEYIYNHPKETKRIIGITYEQLIKLIAKAQVIESEKKEAIAKTEKRLIKAGGVRKKNLTKEEEIILTLFY LHQIPTFQTLGINFGISESSANNIFHYWIDILRELLPASLLEQVKKKKMNWNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15506; Mature: 15506
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKVSQMNPTLEYIYNHPKETKRIIGITYEQLIKLIAKAQVIESEKKEAIAKTEKRLIKA CCCCCCCCCHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGVRKKNLTKEEEIILTLFYLHQIPTFQTLGINFGISESSANNIFHYWIDILRELLPASL CCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LEQVKKKKMNWNG HHHHHHHCCCCCC >Mature Secondary Structure MYKVSQMNPTLEYIYNHPKETKRIIGITYEQLIKLIAKAQVIESEKKEAIAKTEKRLIKA CCCCCCCCCHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGVRKKNLTKEEEIILTLFYLHQIPTFQTLGINFGISESSANNIFHYWIDILRELLPASL CCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LEQVKKKKMNWNG HHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA