| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113473968
Identifier: 113473968
GI number: 113473968
Start: 59088
End: 59294
Strand: Direct
Name: 113473968
Synonym: Tery_0037
Alternate gene names: NA
Gene position: 59088-59294 (Clockwise)
Preceding gene: 113473965
Following gene: 113473971
Centisome position: 0.76
GC content: 34.78
Gene sequence:
>207_bases ATGCCTGGTCAAAAAAAAGGGAAAAAAGTTTATGGTGAGCAAGAGGGAAAACGAGGTAAAAGAGGAAATTTAGTAGCCGG GAGAAGAAAAAAGGAAAAAGATTTAATAGCACCAATTATATTTAAAGGAACCCTAAATGCTGTGGGATTTGAACAATGGT TATACCAATTTCCTAAAGTCCGACTACACATAATGCTTCAAGAATAA
Upstream 100 bases:
>100_bases ATATTATCAGCTTTCCCTTGAAATTTTATCAAAAAATTTGGAAGTAAAAGCCTTGTATTTATTGATAAATCAGAATTTGA AGATAATCAAGACTGTATTT
Downstream 100 bases:
>100_bases AATCATATCCTGTACAAGAAGCAATATCTTTTTGACTAAATCCAGTTAATATATTTCTCAGGATTCTGCGTCAGAAATCT AAGGAATCGAAAACTCGATT
Product: IS630 family transposase
Products: NA
Alternate protein names: Transposase Family Protein
Number of amino acids: Translated: 68; Mature: 67
Protein sequence:
>68_residues MPGQKKGKKVYGEQEGKRGKRGNLVAGRRKKEKDLIAPIIFKGTLNAVGFEQWLYQFPKVRLHIMLQE
Sequences:
>Translated_68_residues MPGQKKGKKVYGEQEGKRGKRGNLVAGRRKKEKDLIAPIIFKGTLNAVGFEQWLYQFPKVRLHIMLQE >Mature_67_residues PGQKKGKKVYGEQEGKRGKRGNLVAGRRKKEKDLIAPIIFKGTLNAVGFEQWLYQFPKVRLHIMLQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7839; Mature: 7708
Theoretical pI: Translated: 11.05; Mature: 11.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGQKKGKKVYGEQEGKRGKRGNLVAGRRKKEKDLIAPIIFKGTLNAVGFEQWLYQFPKV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHCCCE RLHIMLQE EEEEEEEC >Mature Secondary Structure PGQKKGKKVYGEQEGKRGKRGNLVAGRRKKEKDLIAPIIFKGTLNAVGFEQWLYQFPKV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHCCCE RLHIMLQE EEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA