Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113473966

Identifier: 113473966

GI number: 113473966

Start: 56599

End: 56982

Strand: Reverse

Name: 113473966

Synonym: Tery_0034

Alternate gene names: NA

Gene position: 56982-56599 (Counterclockwise)

Preceding gene: 113473967

Following gene: 113473962

Centisome position: 0.74

GC content: 33.59

Gene sequence:

>384_bases
ATGAATATCACCTTTGAAGAATTAAATACAATTGATAAAAAGCTTTCAAAACGTCACATAGATCTAGACCCTGGTGGTTA
TTTTATTATCTTCATCGACAAAAAAGCTGGTCTTATTTTTGCAAAACATTTTACTAATATAATTGACAGCCGAGGTCTAG
CTATCGATCCAGAAACAGGAAAACCTATTCCTGCTAAAGGTAAAGTAGAACGTCAGGAAAATGCAATATTTACTGCAAAA
ACCGCAAAAGAAATGTGTGTCAAAATATTTGAAGAAACCCGTCCTTGTCACATCACAATGTTAGATCATGCTGCTTATTT
AGGGCGGGAATTTGTCCGTGCTGAAATTGCTTTATTAAGTGGTAAAGAATATATTCAAGATTAA

Upstream 100 bases:

>100_bases
AAAATTATGGGAATTGCTATATAAATTTTAAGATGCCATAACTGAGTTAAACAACCAAGAAAAATGTAGAATAAAATACA
AGCAATTCTAAATTTGAACT

Downstream 100 bases:

>100_bases
CTCAATTTACAGAAATTATGTATAAATGAAACCTTTTGCTATTTTCTTGAATTACTAGCCAGAAAAGCTTTGATACCAGA
AATAAGTAGCCATAGGTACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MNITFEELNTIDKKLSKRHIDLDPGGYFIIFIDKKAGLIFAKHFTNIIDSRGLAIDPETGKPIPAKGKVERQENAIFTAK
TAKEMCVKIFEETRPCHITMLDHAAYLGREFVRAEIALLSGKEYIQD

Sequences:

>Translated_127_residues
MNITFEELNTIDKKLSKRHIDLDPGGYFIIFIDKKAGLIFAKHFTNIIDSRGLAIDPETGKPIPAKGKVERQENAIFTAK
TAKEMCVKIFEETRPCHITMLDHAAYLGREFVRAEIALLSGKEYIQD
>Mature_127_residues
MNITFEELNTIDKKLSKRHIDLDPGGYFIIFIDKKAGLIFAKHFTNIIDSRGLAIDPETGKPIPAKGKVERQENAIFTAK
TAKEMCVKIFEETRPCHITMLDHAAYLGREFVRAEIALLSGKEYIQD

Specific function: Unknown

COG id: COG0294

COG function: function code H; Dihydropteroate synthase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ycf91 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017260 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14411; Mature: 14411

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNITFEELNTIDKKLSKRHIDLDPGGYFIIFIDKKAGLIFAKHFTNIIDSRGLAIDPETG
CCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEHHHHHHHHHHCCCCEECCCCC
KPIPAKGKVERQENAIFTAKTAKEMCVKIFEETRPCHITMLDHAAYLGREFVRAEIALLS
CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHC
GKEYIQD
CHHHHCC
>Mature Secondary Structure
MNITFEELNTIDKKLSKRHIDLDPGGYFIIFIDKKAGLIFAKHFTNIIDSRGLAIDPETG
CCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEHHHHHHHHHHCCCCEECCCCC
KPIPAKGKVERQENAIFTAKTAKEMCVKIFEETRPCHITMLDHAAYLGREFVRAEIALLS
CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHC
GKEYIQD
CHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]