| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113473961
Identifier: 113473961
GI number: 113473961
Start: 41475
End: 41900
Strand: Direct
Name: 113473961
Synonym: Tery_0025
Alternate gene names: NA
Gene position: 41475-41900 (Clockwise)
Preceding gene: 113473960
Following gene: 113473963
Centisome position: 0.54
GC content: 31.46
Gene sequence:
>426_bases ATGTGTTTAGAAGTAGCTGAACATTTACCACCAGGCAAAGAACTTAACTTGATAGAAATATTAAATAATCATGCCTCCAA TATTTTGATATTTTCAGCAGCAGAAATAGGTCAACCAGGAAACGGACATATTAATTGTCAACCCTTTGAATATTGGGTTG ACTTATTAAAACAAAACTGGTCGCCAATGTTAACTGAGACATTATTTTTCCGATGTATCTCTAGTTTTTCTTCGTTCAGG AGAAACCCTATCGTACTCCAGAAAAAAACAGAATTAACCTCAGAAAATAGTTCTTTAAAATCTTGGGATAAATTAATTGT CATATCTCAAATACCCTACAAATGGTACGGTCAAAAATCTCAAATTATTTCCGAGATTCTAGAAATAGATATACCTGATG ATATATATTCTTATTCTACTAAATAG
Upstream 100 bases:
>100_bases AGATGGTTTTATCCCACAACAAAGTTTCTTAAATTAAAATCAATATATTTGCCATGATTTAACTCACCCATTAAATTTAC AACGCAAATTTGATTTAGTT
Downstream 100 bases:
>100_bases CAACGGAAATACTAATTATCAATCATTTAAATATTGGGTTTTCTTGTGAAAACAAGACTATTTTCCAATGTTGACTGAGA CATAATTTTTTCCATATATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MCLEVAEHLPPGKELNLIEILNNHASNILIFSAAEIGQPGNGHINCQPFEYWVDLLKQNWSPMLTETLFFRCISSFSSFR RNPIVLQKKTELTSENSSLKSWDKLIVISQIPYKWYGQKSQIISEILEIDIPDDIYSYSTK
Sequences:
>Translated_141_residues MCLEVAEHLPPGKELNLIEILNNHASNILIFSAAEIGQPGNGHINCQPFEYWVDLLKQNWSPMLTETLFFRCISSFSSFR RNPIVLQKKTELTSENSSLKSWDKLIVISQIPYKWYGQKSQIISEILEIDIPDDIYSYSTK >Mature_141_residues MCLEVAEHLPPGKELNLIEILNNHASNILIFSAAEIGQPGNGHINCQPFEYWVDLLKQNWSPMLTETLFFRCISSFSSFR RNPIVLQKKTELTSENSSLKSWDKLIVISQIPYKWYGQKSQIISEILEIDIPDDIYSYSTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16250; Mature: 16250
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCLEVAEHLPPGKELNLIEILNNHASNILIFSAAEIGQPGNGHINCQPFEYWVDLLKQNW CCCCCHHCCCCCCCCHHHHHHHCCCCEEEEEEHHHCCCCCCCCEECCHHHHHHHHHHCCC SPMLTETLFFRCISSFSSFRRNPIVLQKKTELTSENSSLKSWDKLIVISQIPYKWYGQKS CHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHEEEEECCCCHHCCCHH QIISEILEIDIPDDIYSYSTK HHHHHHHHCCCCCHHHCCCCC >Mature Secondary Structure MCLEVAEHLPPGKELNLIEILNNHASNILIFSAAEIGQPGNGHINCQPFEYWVDLLKQNW CCCCCHHCCCCCCCCHHHHHHHCCCCEEEEEEHHHCCCCCCCCEECCHHHHHHHHHHCCC SPMLTETLFFRCISSFSSFRRNPIVLQKKTELTSENSSLKSWDKLIVISQIPYKWYGQKS CHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHEEEEECCCCHHCCCHH QIISEILEIDIPDDIYSYSTK HHHHHHHHCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA