| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113473950
Identifier: 113473950
GI number: 113473950
Start: 21246
End: 22433
Strand: Reverse
Name: 113473950
Synonym: Tery_0013
Alternate gene names: NA
Gene position: 22433-21246 (Counterclockwise)
Preceding gene: 113473951
Following gene: 113473947
Centisome position: 0.29
GC content: 38.05
Gene sequence:
>1188_bases ATGCGTGTAATATTAATGACGGGAAAAGGTGGTGTTGGCAAAACATCAGTGGCCGCCTCAACAGGATTACGTTGTGCAGA GTTAGGCCATAAAACTCTGGTTCTCAGCACTGACCCAGCTCACTCCCTAGCAGATAGCTTTGATATGGAAATGAGCCATG AACCTCGAAAAGTGAAGGAAAACCTTTGGGGTGCTGAGTTGGATGCTTTGATGGAACTAGAGGGAAACTGGGGAGCTGTA AAACGTTACATTACTCAAGTTTTGCAGGCACGCGGTTTGGATGGTGTACAAGCTGAAGAGTTAGCAATTTTGCCAGGAAT GGATGAAATTTTTGGCCTGGTGCGGATGAAGCGTCACTATGACGAGGGGGAATACGATGTTTTAATTATTGATTCTGCTC CAACTGGTACTGCTTTGCGACTTTTGAGTTTACCAGAAGTGGGGGGTTGGTATATGAGAAAGTTTTATAAACCTTTGCAG GGAATGTCGGTAGCATTGAGACCTCTTTTTGAGCCTATTTTTAAACCTATTACTGGTTTTTCTTTGCCAGATAAAGAAGT TATGGATGCTCCTTATGAATTTTATGAGCAAATTGAGGCTTTAGAAAAGGTTTTAACTGATAATACTAAGACTTCTGTGC GTTTAATTACTAATCCTGAAAAAATGGTAATTAAGGAGTCTTTACGCGCTCATGCTTATTTAAGTTTATACAATGTTTCG ACAGATTTAGTAGTAGCAAATCGAATTATTCCTGATTCTGTAAGTGACCCTTTCTTTAAAAAGTGGAAGGAAAATCAACA GCAATATCGGCAAGAAATTCACGATAATTTTAGACCTTTACCTGTGAAGGAAGTACCTCTTTATTCTGAAGAAATGTGTG GTTTAGCTGCTTTGAAGAGGTTGAAAGAAACTCTTTATGGAGATGAAGATCCCAGTCAGGTTTATTATAAGGAAAATACT GTTAAGGTAGTGCAAGAAAAGGGTAATTATAATTTGGAATTATATTTGCCAGGAATTCCTAAAGAGAAAATTCAATTGAA TAAAACTGGAGATGAGTTGAATATTAGAATTGGTAATCATCGTCGGAATTTAGTTTTACCTCAAGCTTTAGCATCATTGC AACCTGTGGGGGCAAAAATGGAGGATGATTATTTGAAAATTAGATTTGCTGAAGTGGCAAAAGTTTAG
Upstream 100 bases:
>100_bases AATACAATTTTGGTATGTAAAATCTCCTCAACACTGAAAAAGTAAAAAACCCGCTAAAGTTAAAATATGTAAACATCATT CAGAAAAGGTTAAATAATTG
Downstream 100 bases:
>100_bases GATAGTTATTTTTTTGTAGGAGCAGGTTTTGATTTTTTTCTTTATGTTTAAAGCAGAAAGATTATTTGTCAGTCTACTCC TATAATATAAAATTAAAAGT
Product: arsenite-activated ATPase ArsA
Products: NA
Alternate protein names: Arsenical resistance ATPase; Arsenite-translocating ATPase; Arsenite-transporting ATPase [H]
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MRVILMTGKGGVGKTSVAASTGLRCAELGHKTLVLSTDPAHSLADSFDMEMSHEPRKVKENLWGAELDALMELEGNWGAV KRYITQVLQARGLDGVQAEELAILPGMDEIFGLVRMKRHYDEGEYDVLIIDSAPTGTALRLLSLPEVGGWYMRKFYKPLQ GMSVALRPLFEPIFKPITGFSLPDKEVMDAPYEFYEQIEALEKVLTDNTKTSVRLITNPEKMVIKESLRAHAYLSLYNVS TDLVVANRIIPDSVSDPFFKKWKENQQQYRQEIHDNFRPLPVKEVPLYSEEMCGLAALKRLKETLYGDEDPSQVYYKENT VKVVQEKGNYNLELYLPGIPKEKIQLNKTGDELNIRIGNHRRNLVLPQALASLQPVGAKMEDDYLKIRFAEVAKV
Sequences:
>Translated_395_residues MRVILMTGKGGVGKTSVAASTGLRCAELGHKTLVLSTDPAHSLADSFDMEMSHEPRKVKENLWGAELDALMELEGNWGAV KRYITQVLQARGLDGVQAEELAILPGMDEIFGLVRMKRHYDEGEYDVLIIDSAPTGTALRLLSLPEVGGWYMRKFYKPLQ GMSVALRPLFEPIFKPITGFSLPDKEVMDAPYEFYEQIEALEKVLTDNTKTSVRLITNPEKMVIKESLRAHAYLSLYNVS TDLVVANRIIPDSVSDPFFKKWKENQQQYRQEIHDNFRPLPVKEVPLYSEEMCGLAALKRLKETLYGDEDPSQVYYKENT VKVVQEKGNYNLELYLPGIPKEKIQLNKTGDELNIRIGNHRRNLVLPQALASLQPVGAKMEDDYLKIRFAEVAKV >Mature_395_residues MRVILMTGKGGVGKTSVAASTGLRCAELGHKTLVLSTDPAHSLADSFDMEMSHEPRKVKENLWGAELDALMELEGNWGAV KRYITQVLQARGLDGVQAEELAILPGMDEIFGLVRMKRHYDEGEYDVLIIDSAPTGTALRLLSLPEVGGWYMRKFYKPLQ GMSVALRPLFEPIFKPITGFSLPDKEVMDAPYEFYEQIEALEKVLTDNTKTSVRLITNPEKMVIKESLRAHAYLSLYNVS TDLVVANRIIPDSVSDPFFKKWKENQQQYRQEIHDNFRPLPVKEVPLYSEEMCGLAALKRLKETLYGDEDPSQVYYKENT VKVVQEKGNYNLELYLPGIPKEKIQLNKTGDELNIRIGNHRRNLVLPQALASLQPVGAKMEDDYLKIRFAEVAKV
Specific function: Anion-transporting ATPase. Catalyzes the extrusion of arsenite [H]
COG id: COG0003
COG function: function code P; Oxyanion-translocating ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the arsA ATPase family [H]
Homologues:
Organism=Homo sapiens, GI50428938, Length=291, Percent_Identity=21.3058419243986, Blast_Score=68, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17557003, Length=309, Percent_Identity=23.6245954692557, Blast_Score=79, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6320103, Length=318, Percent_Identity=24.2138364779874, Blast_Score=81, Evalue=2e-16, Organism=Drosophila melanogaster, GI24586297, Length=306, Percent_Identity=22.5490196078431, Blast_Score=75, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003348 - InterPro: IPR008978 [H]
Pfam domain/function: NA
EC number: =3.6.3.16 [H]
Molecular weight: Translated: 44722; Mature: 44722
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVILMTGKGGVGKTSVAASTGLRCAELGHKTLVLSTDPAHSLADSFDMEMSHEPRKVKE CEEEEEECCCCCCCCHHHHHCCCHHHHCCCEEEEEECCCHHHHHHHCCCCCCCCHHHHHH NLWGAELDALMELEGNWGAVKRYITQVLQARGLDGVQAEELAILPGMDEIFGLVRMKRHY HCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHHC DEGEYDVLIIDSAPTGTALRLLSLPEVGGWYMRKFYKPLQGMSVALRPLFEPIFKPITGF CCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCC SLPDKEVMDAPYEFYEQIEALEKVLTDNTKTSVRLITNPEKMVIKESLRAHAYLSLYNVS CCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHEEEEEECC TDLVVANRIIPDSVSDPFFKKWKENQQQYRQEIHDNFRPLPVKEVPLYSEEMCGLAALKR CCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH LKETLYGDEDPSQVYYKENTVKVVQEKGNYNLELYLPGIPKEKIQLNKTGDELNIRIGNH HHHHHCCCCCCCEEEEECCCEEEEEECCCEEEEEEECCCCHHHEEEECCCCEEEEEECCC RRNLVLPQALASLQPVGAKMEDDYLKIRFAEVAKV CCCEEHHHHHHHCCCCCCCCCCCCEEEEHHHHHCC >Mature Secondary Structure MRVILMTGKGGVGKTSVAASTGLRCAELGHKTLVLSTDPAHSLADSFDMEMSHEPRKVKE CEEEEEECCCCCCCCHHHHHCCCHHHHCCCEEEEEECCCHHHHHHHCCCCCCCCHHHHHH NLWGAELDALMELEGNWGAVKRYITQVLQARGLDGVQAEELAILPGMDEIFGLVRMKRHY HCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHHC DEGEYDVLIIDSAPTGTALRLLSLPEVGGWYMRKFYKPLQGMSVALRPLFEPIFKPITGF CCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCC SLPDKEVMDAPYEFYEQIEALEKVLTDNTKTSVRLITNPEKMVIKESLRAHAYLSLYNVS CCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHEEEEEECC TDLVVANRIIPDSVSDPFFKKWKENQQQYRQEIHDNFRPLPVKEVPLYSEEMCGLAALKR CCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH LKETLYGDEDPSQVYYKENTVKVVQEKGNYNLELYLPGIPKEKIQLNKTGDELNIRIGNH HHHHHCCCCCCCEEEEECCCEEEEEECCCEEEEEEECCCCHHHEEEECCCCEEEEEECCC RRNLVLPQALASLQPVGAKMEDDYLKIRFAEVAKV CCCEEHHHHHHHCCCCCCCCCCCCEEEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]