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The map label for this gene is yidC

Identifier: 110835614

GI number: 110835614

Start: 3117307

End: 3119055

Strand: Reverse

Name: yidC

Synonym: ABO_2753

Alternate gene names: 110835614

Gene position: 3119055-3117307 (Counterclockwise)

Preceding gene: 110835615

Following gene: 110835613

Centisome position: 99.97

GC content: 51.57

Gene sequence:

>1749_bases
ATGGAAATCCAGCGCGCCTTAGTTATTACCGGCATTGCCGTTGTTTCATACCTGATGATTCAGGCTTGGCAGCGAGATTA
CGCAAACACTGCAAGCCCTGTCCCTGTTGAACAGGTGGCAGAACAGGGAAACTCTTCATCCTCAGATAGTGCTGATTTGC
CTTCGGTACAGTCGCAAACCGACAACAGCATTCCTTCGGCTCAGTCCGACAATGATCTGCCATCGGTTTCACCTGCAGAT
ATTGCCCAACCCACACCCTCTTCTCAGCGTATTGAAGTCAATACGGATGTTCTTCGTGTGGAAATCAATCCTGTGGGGGG
CGATATCGTTCGCCTGGCATTGCCCGATTATCCCAAGCATGTAGATACCCCTGATCAACCTTTTGTGTTGATGGATCAGA
ATAGCAATGGCACTTATGTGGCTCAGAGCGGGCTAGTAGGCAAGAATGGCACCGACTCCAGCAAAGGCCGCCCGCACTGG
AATAGCGCCCAGCAAAGCTATCGACTTGCTGAAGGGGATAACGAACTTAACGTTGACCTGACACTTACTCAGGACAGCGG
CGCAGAAATCATCAAACGTTATACTTTCGAGAAAGGCAGCTATCTGATTCGTGTTAGCCACATCGTGCGCAATAACGGCA
GCACCCCTTGGACCGGCGCCTTGTACGGACAGATCAAGCGCGATGGGCGTGATGACCCGGGTCTCTCCAAAGCGGGGTTT
GCCCCCATGCCTACCTACCTTGGAGCTGCGTACTGGAGTGCTGACAAGCCGTATAACAAGCTCACGTTTGACGACATGAG
CGAAGACGACGTCAAGCTAGACCAGACCGTGGAAGGCGGCTGGCTGGCCATGGTGCAGCATTACTTTGTATCTGCCTGGA
TACCTGACGCCAAACAAAAGAACCATTACTCCAGCGTTTACCTGAAGTCTCGCGATCAGTACCTGCTGCGGTTTGTGTCG
CCTAATACCACCATACAGCCGGGTGAAGAATCGGTGTTGTACTCCGAGTTCTATGCTGGGCCCAAGCAGCAAGATAACCT
GGAAGCCATCAGTCCTGGGCTGAACATGACTGTGGACTATGGCTGGTTGTGGTTTATCTCCCAGCCTATCTTTGCCTTGT
TGGTGTTCTTGCAAAGCGGAGAAGTGTCCGTATTCGGTATGGATATCGATATCGGTGGCGGTGTGGGTAACTGGGGTGTG
GCGATCATCTTGTTGACCTTAATCATCAAGGCTATCTTCTTTAAGCTCAGCGCCACCAGCTATCGCTCCATGGCCAAAAT
GCGCAAGGTTGCGCCGGAAATGCAGCGCATCAAGGAGCAGAATAAGAACGATAAACAAAAGCAGCAGATGGAAACCATGA
ATCTGTTCAAGCGGGAAAAGATCAACCCGCTGGGCGGCTGTTTGCCAATGCTTGTGCAAATGCCCGTGTTTATCGCCCTA
TATTATGTGCTGCTGGAATCGGTGGAGCTGCGTCAGGCGCCGTTCTTCTTGTGGATTAATGACCTGTCTGTGATGGATCC
GTACTTCGTACTGCCAATCCTGATGGGCGCCTCCATGTTCTTGCAAACCCGCCTAAACCCGACGCCGGCAGACCCGACTC
AAGCGCAGGTGATGAAGTGGATGCCAATGATTTTTGCGGTGTTCATGCTCTGGTTCCCGGCTGGGTTGGTACTGTATTGG
CTAACCAACAACATCTTGTCTATTGCTCAGCAGTGGATTATTACCCGTAATATTGAGAATAGTGCCTGA

Upstream 100 bases:

>100_bases
GTGACCCTCGATATTACTCGGCTATTTGACAAGCTGCTTGCTAAGTGCCGGCAAGCTTGAGAAACTGCGGCCCGTTTTTC
ATGCCACAGATAAGCCTCCT

Downstream 100 bases:

>100_bases
CGCACGTCGTAGGACGTTGGCTGCAGAAAAGAGTAAAGCCGGTCTCACGACCGGCTTTACTCTTTTCTGGCCACGTCTAG
CATCAAACGTCGAGTGCTTT

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 582; Mature: 582

Protein sequence:

>582_residues
MEIQRALVITGIAVVSYLMIQAWQRDYANTASPVPVEQVAEQGNSSSSDSADLPSVQSQTDNSIPSAQSDNDLPSVSPAD
IAQPTPSSQRIEVNTDVLRVEINPVGGDIVRLALPDYPKHVDTPDQPFVLMDQNSNGTYVAQSGLVGKNGTDSSKGRPHW
NSAQQSYRLAEGDNELNVDLTLTQDSGAEIIKRYTFEKGSYLIRVSHIVRNNGSTPWTGALYGQIKRDGRDDPGLSKAGF
APMPTYLGAAYWSADKPYNKLTFDDMSEDDVKLDQTVEGGWLAMVQHYFVSAWIPDAKQKNHYSSVYLKSRDQYLLRFVS
PNTTIQPGEESVLYSEFYAGPKQQDNLEAISPGLNMTVDYGWLWFISQPIFALLVFLQSGEVSVFGMDIDIGGGVGNWGV
AIILLTLIIKAIFFKLSATSYRSMAKMRKVAPEMQRIKEQNKNDKQKQQMETMNLFKREKINPLGGCLPMLVQMPVFIAL
YYVLLESVELRQAPFFLWINDLSVMDPYFVLPILMGASMFLQTRLNPTPADPTQAQVMKWMPMIFAVFMLWFPAGLVLYW
LTNNILSIAQQWIITRNIENSA

Sequences:

>Translated_582_residues
MEIQRALVITGIAVVSYLMIQAWQRDYANTASPVPVEQVAEQGNSSSSDSADLPSVQSQTDNSIPSAQSDNDLPSVSPAD
IAQPTPSSQRIEVNTDVLRVEINPVGGDIVRLALPDYPKHVDTPDQPFVLMDQNSNGTYVAQSGLVGKNGTDSSKGRPHW
NSAQQSYRLAEGDNELNVDLTLTQDSGAEIIKRYTFEKGSYLIRVSHIVRNNGSTPWTGALYGQIKRDGRDDPGLSKAGF
APMPTYLGAAYWSADKPYNKLTFDDMSEDDVKLDQTVEGGWLAMVQHYFVSAWIPDAKQKNHYSSVYLKSRDQYLLRFVS
PNTTIQPGEESVLYSEFYAGPKQQDNLEAISPGLNMTVDYGWLWFISQPIFALLVFLQSGEVSVFGMDIDIGGGVGNWGV
AIILLTLIIKAIFFKLSATSYRSMAKMRKVAPEMQRIKEQNKNDKQKQQMETMNLFKREKINPLGGCLPMLVQMPVFIAL
YYVLLESVELRQAPFFLWINDLSVMDPYFVLPILMGASMFLQTRLNPTPADPTQAQVMKWMPMIFAVFMLWFPAGLVLYW
LTNNILSIAQQWIITRNIENSA
>Mature_582_residues
MEIQRALVITGIAVVSYLMIQAWQRDYANTASPVPVEQVAEQGNSSSSDSADLPSVQSQTDNSIPSAQSDNDLPSVSPAD
IAQPTPSSQRIEVNTDVLRVEINPVGGDIVRLALPDYPKHVDTPDQPFVLMDQNSNGTYVAQSGLVGKNGTDSSKGRPHW
NSAQQSYRLAEGDNELNVDLTLTQDSGAEIIKRYTFEKGSYLIRVSHIVRNNGSTPWTGALYGQIKRDGRDDPGLSKAGF
APMPTYLGAAYWSADKPYNKLTFDDMSEDDVKLDQTVEGGWLAMVQHYFVSAWIPDAKQKNHYSSVYLKSRDQYLLRFVS
PNTTIQPGEESVLYSEFYAGPKQQDNLEAISPGLNMTVDYGWLWFISQPIFALLVFLQSGEVSVFGMDIDIGGGVGNWGV
AIILLTLIIKAIFFKLSATSYRSMAKMRKVAPEMQRIKEQNKNDKQKQQMETMNLFKREKINPLGGCLPMLVQMPVFIAL
YYVLLESVELRQAPFFLWINDLSVMDPYFVLPILMGASMFLQTRLNPTPADPTQAQVMKWMPMIFAVFMLWFPAGLVLYW
LTNNILSIAQQWIITRNIENSA

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily

Homologues:

Organism=Homo sapiens, GI223718097, Length=201, Percent_Identity=26.865671641791, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI1790140, Length=585, Percent_Identity=39.3162393162393, Blast_Score=426, Evalue=1e-120,
Organism=Drosophila melanogaster, GI24662345, Length=191, Percent_Identity=28.7958115183246, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI21356443, Length=191, Percent_Identity=28.7958115183246, Blast_Score=84, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OXAA_ALCBS (Q0VKU7)

Other databases:

- EMBL:   AM286690
- RefSeq:   YP_694473.1
- ProteinModelPortal:   Q0VKU7
- SMR:   Q0VKU7
- STRING:   Q0VKU7
- GeneID:   4211573
- GenomeReviews:   AM286690_GR
- KEGG:   abo:ABO_2753
- NMPDR:   fig|393595.12.peg.2763
- eggNOG:   COG0706
- HOGENOM:   HBG507812
- OMA:   TYRGAAF
- PhylomeDB:   Q0VKU7
- BioCyc:   ABOR393595:ABO_2753-MONOMER
- HAMAP:   MF_01810
- InterPro:   IPR019998
- InterPro:   IPR001708
- PANTHER:   PTHR12428
- PRINTS:   PR00701
- PRINTS:   PR01900
- TIGRFAMs:   TIGR03593
- TIGRFAMs:   TIGR03592

Pfam domain/function: PF02096 60KD_IMP

EC number: NA

Molecular weight: Translated: 65099; Mature: 65099

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1501999c)-; HASH(0x150b1e68)-; HASH(0x14c66cd0)-; HASH(0x144f917c)-; HASH(0x1461fb18)-; HASH(0x1461fbe4)-;

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIQRALVITGIAVVSYLMIQAWQRDYANTASPVPVEQVAEQGNSSSSDSADLPSVQSQT
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC
DNSIPSAQSDNDLPSVSPADIAQPTPSSQRIEVNTDVLRVEINPVGGDIVRLALPDYPKH
CCCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEECCEEEEEEEECCCCCEEEEECCCCCCC
VDTPDQPFVLMDQNSNGTYVAQSGLVGKNGTDSSKGRPHWNSAQQSYRLAEGDNELNVDL
CCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHEECCCCCCEEEEEE
TLTQDSGAEIIKRYTFEKGSYLIRVSHIVRNNGSTPWTGALYGQIKRDGRDDPGLSKAGF
EEECCCCHHHHHHHHCCCCCEEEEEEEHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
APMPTYLGAAYWSADKPYNKLTFDDMSEDDVKLDQTVEGGWLAMVQHYFVSAWIPDAKQK
CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
NHYSSVYLKSRDQYLLRFVSPNTTIQPGEESVLYSEFYAGPKQQDNLEAISPGLNMTVDY
CCCCEEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCEEEEC
GWLWFISQPIFALLVFLQSGEVSVFGMDIDIGGGVGNWGVAIILLTLIIKAIFFKLSATS
CHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
YRSMAKMRKVAPEMQRIKEQNKNDKQKQQMETMNLFKREKINPLGGCLPMLVQMPVFIAL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
YYVLLESVELRQAPFFLWINDLSVMDPYFVLPILMGASMFLQTRLNPTPADPTQAQVMKW
HHHHHHHHHHHCCCEEEEECCCHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
MPMIFAVFMLWFPAGLVLYWLTNNILSIAQQWIITRNIENSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
>Mature Secondary Structure
MEIQRALVITGIAVVSYLMIQAWQRDYANTASPVPVEQVAEQGNSSSSDSADLPSVQSQT
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC
DNSIPSAQSDNDLPSVSPADIAQPTPSSQRIEVNTDVLRVEINPVGGDIVRLALPDYPKH
CCCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEECCEEEEEEEECCCCCEEEEECCCCCCC
VDTPDQPFVLMDQNSNGTYVAQSGLVGKNGTDSSKGRPHWNSAQQSYRLAEGDNELNVDL
CCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHEECCCCCCEEEEEE
TLTQDSGAEIIKRYTFEKGSYLIRVSHIVRNNGSTPWTGALYGQIKRDGRDDPGLSKAGF
EEECCCCHHHHHHHHCCCCCEEEEEEEHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
APMPTYLGAAYWSADKPYNKLTFDDMSEDDVKLDQTVEGGWLAMVQHYFVSAWIPDAKQK
CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
NHYSSVYLKSRDQYLLRFVSPNTTIQPGEESVLYSEFYAGPKQQDNLEAISPGLNMTVDY
CCCCEEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCEEEEC
GWLWFISQPIFALLVFLQSGEVSVFGMDIDIGGGVGNWGVAIILLTLIIKAIFFKLSATS
CHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
YRSMAKMRKVAPEMQRIKEQNKNDKQKQQMETMNLFKREKINPLGGCLPMLVQMPVFIAL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
YYVLLESVELRQAPFFLWINDLSVMDPYFVLPILMGASMFLQTRLNPTPADPTQAQVMKW
HHHHHHHHHHHCCCEEEEECCCHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
MPMIFAVFMLWFPAGLVLYWLTNNILSIAQQWIITRNIENSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA