| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is pstS [H]
Identifier: 110835546
GI number: 110835546
Start: 3031495
End: 3032541
Strand: Reverse
Name: pstS [H]
Synonym: ABO_2685
Alternate gene names: 110835546
Gene position: 3032541-3031495 (Counterclockwise)
Preceding gene: 110835550
Following gene: 110835545
Centisome position: 97.19
GC content: 55.01
Gene sequence:
>1047_bases ATGAAAGCAACACTGGCAGGTGCCGCTGCTGCTCTGGCCATGGCCAGCGCTCCGGGTACCGCGATGGCTCGTGACACCAT TTCCATCGTGGGTTCATCCACGGTATACCCGTTCGCCACCGTAGTGGCCGAGCGTTTTGGGCGTACCGGTAACGCCACCC CGAAAATTGAATCCACCGGTTCCGGCGGCGGCATGAAGCTGTTTTGCCAGGGCGTCGGAACTCAGCACCCGGACATTACC AATGCTTCTCGCCGGATGAAGAAATCCGAGTTTGAGCTGTGCCAGAGCAACGGTGTGAAAGACATTACCGAGGTGAAGGT AGGTTATGACGGCATCGTGATTGCCAACTCGGTGAAAGGTAAGCACATCGATCTGTCCCTGCGCGAAGTTTTCCTGGCCC TGGCCAAGGATGTGCCGAACCCGAAAGGCGGTGAAGAGCTGGTTGCTAACCCTTACAAAACCTGGAAAGAGATTAACCCA GCCCTGCCGAACGTGAAGATCGAAGTGCTAGGCCCGCCGCCGACTTCCGGTACTCGTGATGCATTCAACGAACTGGCCAT TGAAGGTGGCTGTAAAACCTTCCCATGGCTAAAAGCCATTAAGGGTGAAGATAAGTCCAAGTACAAAGCGATTTGCCGCA GTGTGCGTGAGGACGGTGTCTATGTTGAAGCCGGTGAAAACGACAACCTGATCGTGCAGAAGTTGGAAAAAAATCCGAAT GCCTTCGGTGTGTTCGGTTACTCCTTCCTGGATCAGAACCGCGGTGTGGTGCAAGCTGCAAATGTTGGCGGTGTTGAGCC CACTTTCGAAGCGATCGGTTCTGGCGAATACCCGGTATCCCGCTCTTTGTACTTCTACGTGAAGAAAGCGCATGTAGGTG TGGTGCCGGGTATCGAGGGTTACGTGAAAGAGTTCACCAGCGAGAAAGCGTGGGGTGATCAGGGGTACCTGAGCGAGAAA GGCTTGATCCCGCTGGCTGATGATCTGCGCAAGTCCATGGCTAAACAGGCGCGTAGCCTGAAGCCCATGACCGGCAACGA GCTGTAA
Upstream 100 bases:
>100_bases TGAAACATGAACTGGCTTGCAACACGCGCAAGACAAACCGGGGTGGATACTTCCTACAAGCGCCGGTGCCAAAACTAGGA GGCTTATTGTGAACGTTAAA
Downstream 100 bases:
>100_bases GCAAGGGAATAATAAAGAAGCACGGATGCTTTTGGCCCGGTGGTGTTTGCCGCCGGGCTTTTTCGCCCCTGAAAAGGTGT GTTTGTTCCACCAAGATTGC
Product: phosphate ABC transporter periplasmic binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MKATLAGAAAALAMASAPGTAMARDTISIVGSSTVYPFATVVAERFGRTGNATPKIESTGSGGGMKLFCQGVGTQHPDIT NASRRMKKSEFELCQSNGVKDITEVKVGYDGIVIANSVKGKHIDLSLREVFLALAKDVPNPKGGEELVANPYKTWKEINP ALPNVKIEVLGPPPTSGTRDAFNELAIEGGCKTFPWLKAIKGEDKSKYKAICRSVREDGVYVEAGENDNLIVQKLEKNPN AFGVFGYSFLDQNRGVVQAANVGGVEPTFEAIGSGEYPVSRSLYFYVKKAHVGVVPGIEGYVKEFTSEKAWGDQGYLSEK GLIPLADDLRKSMAKQARSLKPMTGNEL
Sequences:
>Translated_348_residues MKATLAGAAAALAMASAPGTAMARDTISIVGSSTVYPFATVVAERFGRTGNATPKIESTGSGGGMKLFCQGVGTQHPDIT NASRRMKKSEFELCQSNGVKDITEVKVGYDGIVIANSVKGKHIDLSLREVFLALAKDVPNPKGGEELVANPYKTWKEINP ALPNVKIEVLGPPPTSGTRDAFNELAIEGGCKTFPWLKAIKGEDKSKYKAICRSVREDGVYVEAGENDNLIVQKLEKNPN AFGVFGYSFLDQNRGVVQAANVGGVEPTFEAIGSGEYPVSRSLYFYVKKAHVGVVPGIEGYVKEFTSEKAWGDQGYLSEK GLIPLADDLRKSMAKQARSLKPMTGNEL >Mature_348_residues MKATLAGAAAALAMASAPGTAMARDTISIVGSSTVYPFATVVAERFGRTGNATPKIESTGSGGGMKLFCQGVGTQHPDIT NASRRMKKSEFELCQSNGVKDITEVKVGYDGIVIANSVKGKHIDLSLREVFLALAKDVPNPKGGEELVANPYKTWKEINP ALPNVKIEVLGPPPTSGTRDAFNELAIEGGCKTFPWLKAIKGEDKSKYKAICRSVREDGVYVEAGENDNLIVQKLEKNPN AFGVFGYSFLDQNRGVVQAANVGGVEPTFEAIGSGEYPVSRSLYFYVKKAHVGVVPGIEGYVKEFTSEKAWGDQGYLSEK GLIPLADDLRKSMAKQARSLKPMTGNEL
Specific function: May be involved in the system for phosphate transport across the cytoplasmic membrane [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37259; Mature: 37259
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKATLAGAAAALAMASAPGTAMARDTISIVGSSTVYPFATVVAERFGRTGNATPKIESTG CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC SGGGMKLFCQGVGTQHPDITNASRRMKKSEFELCQSNGVKDITEVKVGYDGIVIANSVKG CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCCEEEEECCCC KHIDLSLREVFLALAKDVPNPKGGEELVANPYKTWKEINPALPNVKIEVLGPPPTSGTRD CEEEHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHCCCCCCCEEEEEECCCCCCCHHH AFNELAIEGGCKTFPWLKAIKGEDKSKYKAICRSVREDGVYVEAGENDNLIVQKLEKNPN HHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCEEEEECCCCCEEEEEECCCCC AFGVFGYSFLDQNRGVVQAANVGGVEPTFEAIGSGEYPVSRSLYFYVKKAHVGVVPGIEG EEEEEEHHHHHCCCCEEEECCCCCCCHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHH YVKEFTSEKAWGDQGYLSEKGLIPLADDLRKSMAKQARSLKPMTGNEL HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKATLAGAAAALAMASAPGTAMARDTISIVGSSTVYPFATVVAERFGRTGNATPKIESTG CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC SGGGMKLFCQGVGTQHPDITNASRRMKKSEFELCQSNGVKDITEVKVGYDGIVIANSVKG CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCCEEEEECCCC KHIDLSLREVFLALAKDVPNPKGGEELVANPYKTWKEINPALPNVKIEVLGPPPTSGTRD CEEEHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHCCCCCCCEEEEEECCCCCCCHHH AFNELAIEGGCKTFPWLKAIKGEDKSKYKAICRSVREDGVYVEAGENDNLIVQKLEKNPN HHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCEEEEECCCCCEEEEEECCCCC AFGVFGYSFLDQNRGVVQAANVGGVEPTFEAIGSGEYPVSRSLYFYVKKAHVGVVPGIEG EEEEEEHHHHHCCCCEEEECCCCCCCHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHH YVKEFTSEKAWGDQGYLSEKGLIPLADDLRKSMAKQARSLKPMTGNEL HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]