| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is pstC [H]
Identifier: 110835545
GI number: 110835545
Start: 3029966
End: 3031354
Strand: Reverse
Name: pstC [H]
Synonym: ABO_2684
Alternate gene names: 110835545
Gene position: 3031354-3029966 (Counterclockwise)
Preceding gene: 110835546
Following gene: 110835544
Centisome position: 97.15
GC content: 58.1
Gene sequence:
>1389_bases ATGCAAACCGGAAACCTGCTGTTGCTGCTGGTAGTGATGGTGGCCGGCGCTTACTACTTGGGGCTTCGCCGCTCCTTTGC GCTGGCCCGCCCGCTGGGCGGCATTCGCCACCTGCACTCATTGCCGTTTTACTTCGCCATGCGTTCGGCTATGTGGTGCG CGATTCCCGCCTTAATCGTGCTGGGGCTGTGGTTAGCATTTGATGACAACATCATCCGCCAGCAAGTGCTGGGCAGCTTG CCGGTGGAGCTGCAACCGACGGATGCCTCCAGCTATAACCTGACGCTTAGCAAAATTCAGAATGTGGCCAGTGGTGCGCT ACCGACTAATTTCGTGGAGCCGCCGATTGCCGCAGCGGCGGAGCATCTGCAGTCATTGCGCCAGACCAGCGCCATGGCGC TGACCGTGGTGATTATTGTGCTGTGTATGTTGGGCGGCACCTGGGCCTGGCTGAAAGTATCGCCGCAATTGCGCGCCCGT CAGCAGGTGGAGCGCGTACTGCAGACGCTGTTCATGCTGTGTGCCACGGTAGCGATCCTTACCACCGTGGGCATCGTTAT GTCGGTGCTGTTCGAATCGATCCGGTTCTTCGGCAAGGTGCCGGTGACCGATTTCTTATTCGGCTTGCAGTGGAGTCCAC AGACTGCCCTGCGGGCTGACCAGGTTGCCTCTGGCGGCGCTTTTGGTGCGGTGCCCTTGTTCATGGGCACTATGTTGATC TCTGCGATTGCCTTATTGGTGGCGGTTCCGGTGGGGTTGATGTCCGCTATTTATCTATCGGAGTACGCCAGCAAGCGAGT GCGCACGGTGGCCAAGCCGGCCCTGGAAGTGTTGGCCGGGGTGCCCACGGTGGTTTACGGTTTTTTTGCTGCGTTGACAG TGGCTCCGTTTATTCGCGGCATGGGTGAAGCCGTGGGGTTAGATGTGGCGTCGGAGTCGGCCCTGGCCGCAGGCTTGGTG ATGGGCGTGATGATTATTCCGTTTGTCTCATCGCTTGCCGATGACGTGATTACTGCGGTGCCCCAGTCCATGCGCGATGG CTCCTTGGGATTGGGGGCAACCAAAAGCGAAACCATCAAGAAAGTGATTTTTCCGGCGGCATTACCGGGGATTATGGGGG GCATTTTGCTAGCCGCGTCCCGAGCCATTGGTGAAACCATGATTGTGGTCATGGCCGCCGGCTTGGCCGCTAACCTTACT GCCAACCCACTGGAAGCGGTCACTACCATTACCGTGCAGATCGTTACGTTGCTGACCGGTGACCAGGAATTCGACAGTGC CAAAACCCTGGCGGCGTTTGCCCTAGGCCTGATGTTGTTCATCACAACCCTGGTTATGAATATCTTCGCGCTGCACATCG TGAAGAAATACCGCGAGCAGTACGACTAG
Upstream 100 bases:
>100_bases TGGTGTTTGCCGCCGGGCTTTTTCGCCCCTGAAAAGGTGTGTTTGTTCCACCAAGATTGCCGCGGTGATCTTGGTTGAGC AAATCCGATCGGAGTGATAC
Downstream 100 bases:
>100_bases CGTCGGGAGAAAGTTATGAGCAAAACCACAGAAAAAGTGCGTAAGACGCTGGCCCGACGCTACCGGGCAGAGAAACGTTT CAAAGCCTATGGTATGGCCT
Product: phosphate ABC transporter permease
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MQTGNLLLLLVVMVAGAYYLGLRRSFALARPLGGIRHLHSLPFYFAMRSAMWCAIPALIVLGLWLAFDDNIIRQQVLGSL PVELQPTDASSYNLTLSKIQNVASGALPTNFVEPPIAAAAEHLQSLRQTSAMALTVVIIVLCMLGGTWAWLKVSPQLRAR QQVERVLQTLFMLCATVAILTTVGIVMSVLFESIRFFGKVPVTDFLFGLQWSPQTALRADQVASGGAFGAVPLFMGTMLI SAIALLVAVPVGLMSAIYLSEYASKRVRTVAKPALEVLAGVPTVVYGFFAALTVAPFIRGMGEAVGLDVASESALAAGLV MGVMIIPFVSSLADDVITAVPQSMRDGSLGLGATKSETIKKVIFPAALPGIMGGILLAASRAIGETMIVVMAAGLAANLT ANPLEAVTTITVQIVTLLTGDQEFDSAKTLAAFALGLMLFITTLVMNIFALHIVKKYREQYD
Sequences:
>Translated_462_residues MQTGNLLLLLVVMVAGAYYLGLRRSFALARPLGGIRHLHSLPFYFAMRSAMWCAIPALIVLGLWLAFDDNIIRQQVLGSL PVELQPTDASSYNLTLSKIQNVASGALPTNFVEPPIAAAAEHLQSLRQTSAMALTVVIIVLCMLGGTWAWLKVSPQLRAR QQVERVLQTLFMLCATVAILTTVGIVMSVLFESIRFFGKVPVTDFLFGLQWSPQTALRADQVASGGAFGAVPLFMGTMLI SAIALLVAVPVGLMSAIYLSEYASKRVRTVAKPALEVLAGVPTVVYGFFAALTVAPFIRGMGEAVGLDVASESALAAGLV MGVMIIPFVSSLADDVITAVPQSMRDGSLGLGATKSETIKKVIFPAALPGIMGGILLAASRAIGETMIVVMAAGLAANLT ANPLEAVTTITVQIVTLLTGDQEFDSAKTLAAFALGLMLFITTLVMNIFALHIVKKYREQYD >Mature_462_residues MQTGNLLLLLVVMVAGAYYLGLRRSFALARPLGGIRHLHSLPFYFAMRSAMWCAIPALIVLGLWLAFDDNIIRQQVLGSL PVELQPTDASSYNLTLSKIQNVASGALPTNFVEPPIAAAAEHLQSLRQTSAMALTVVIIVLCMLGGTWAWLKVSPQLRAR QQVERVLQTLFMLCATVAILTTVGIVMSVLFESIRFFGKVPVTDFLFGLQWSPQTALRADQVASGGAFGAVPLFMGTMLI SAIALLVAVPVGLMSAIYLSEYASKRVRTVAKPALEVLAGVPTVVYGFFAALTVAPFIRGMGEAVGLDVASESALAAGLV MGVMIIPFVSSLADDVITAVPQSMRDGSLGLGATKSETIKKVIFPAALPGIMGGILLAASRAIGETMIVVMAAGLAANLT ANPLEAVTTITVQIVTLLTGDQEFDSAKTLAAFALGLMLFITTLVMNIFALHIVKKYREQYD
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=311, Percent_Identity=30.2250803858521, Blast_Score=108, Evalue=1e-24, Organism=Escherichia coli, GI1790163, Length=152, Percent_Identity=28.9473684210526, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 49091; Mature: 49091
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTGNLLLLLVVMVAGAYYLGLRRSFALARPLGGIRHLHSLPFYFAMRSAMWCAIPALIV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLWLAFDDNIIRQQVLGSLPVELQPTDASSYNLTLSKIQNVASGALPTNFVEPPIAAAA HHHHHHHCHHHHHHHHHCCCCCEECCCCCCCCCEEHHHHHHHHCCCCCCCCCCCCHHHHH EHLQSLRQTSAMALTVVIIVLCMLGGTWAWLKVSPQLRARQQVERVLQTLFMLCATVAIL HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH TTVGIVMSVLFESIRFFGKVPVTDFLFGLQWSPQTALRADQVASGGAFGAVPLFMGTMLI HHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH SAIALLVAVPVGLMSAIYLSEYASKRVRTVAKPALEVLAGVPTVVYGFFAALTVAPFIRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH MGEAVGLDVASESALAAGLVMGVMIIPFVSSLADDVITAVPQSMRDGSLGLGATKSETIK CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHH KVIFPAALPGIMGGILLAASRAIGETMIVVMAAGLAANLTANPLEAVTTITVQIVTLLTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC DQEFDSAKTLAAFALGLMLFITTLVMNIFALHIVKKYREQYD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQTGNLLLLLVVMVAGAYYLGLRRSFALARPLGGIRHLHSLPFYFAMRSAMWCAIPALIV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLWLAFDDNIIRQQVLGSLPVELQPTDASSYNLTLSKIQNVASGALPTNFVEPPIAAAA HHHHHHHCHHHHHHHHHCCCCCEECCCCCCCCCEEHHHHHHHHCCCCCCCCCCCCHHHHH EHLQSLRQTSAMALTVVIIVLCMLGGTWAWLKVSPQLRARQQVERVLQTLFMLCATVAIL HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH TTVGIVMSVLFESIRFFGKVPVTDFLFGLQWSPQTALRADQVASGGAFGAVPLFMGTMLI HHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH SAIALLVAVPVGLMSAIYLSEYASKRVRTVAKPALEVLAGVPTVVYGFFAALTVAPFIRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH MGEAVGLDVASESALAAGLVMGVMIIPFVSSLADDVITAVPQSMRDGSLGLGATKSETIK CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHH KVIFPAALPGIMGGILLAASRAIGETMIVVMAAGLAANLTANPLEAVTTITVQIVTLLTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC DQEFDSAKTLAAFALGLMLFITTLVMNIFALHIVKKYREQYD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]