| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is phoU [H]
Identifier: 110835542
GI number: 110835542
Start: 3027025
End: 3027738
Strand: Reverse
Name: phoU [H]
Synonym: ABO_2681
Alternate gene names: 110835542
Gene position: 3027738-3027025 (Counterclockwise)
Preceding gene: 110835543
Following gene: 110835541
Centisome position: 97.04
GC content: 50.84
Gene sequence:
>714_bases ATGGACCGTATGCATTTTGGCGAGCATAGCTCGACCCAGTTTAACGCCGCGTTGGAATCTATCCGTAACCACCTGATGGA AATGGGCGGTTTGGTGGAAAAACAGGTGGTGGATGCATTGCAGGCATTGCTGCAGGCTGACTCTGCGCTAGCTGAAAAAG TCATAGAAACCGAAAAGAAGGTCGATAAGCTGGAAATCCTCATCGACGAGGAATGCACCAAGGTGCTGGCTTTGCGTCAG CCGGCGGCTTCGGATCTGCGTTTAATCATTGCTGTGTCTAAAGCGGTATCTGATCTAGAGCGCATTGGTGATGAGTCGGC CAAAATTGCCCGCATGGGGTTGCAGCTGGCTGAAGAGGGCGAGTCACCTCGCGGTTACGTGGAAGTACGGCATATCGGTA ACCATGTGCGCAATATGTTGCGTGATGCCCTGGATGCCTTTGCCCGCTTTGACGCCCATAAAGCCCTGACCGTGGCGGCG GAAGATAATGAAGTAGACATTGAATACGCCAGTGCCATGCGTTCTTTAGCGACCTTCATGATGGAAGATCCTCGCTCTAT CACTCGAGTACTCAACATCATTTGGTCTCTGCGTGCCCTGGAACGCATTGGTGACCATGCCCGTAATATCGGTGAGCAGG TTATCTATTTGGTGAAAGGTAAGGATGTGCGGCACATCAGCATTGATGAAATTGAAGAGAAGTTGAAAAGCTAA
Upstream 100 bases:
>100_bases GAATGATACCGAGACCGTGTTCACCAAACCCGAGCATGATCTGACGGAAGCTTATATCACTGGCCGCTTCGGTTAACGTG CGGGTAAGGAGAACAAGATA
Downstream 100 bases:
>100_bases CAAAGTTGCCGCCCGCAGCATGAAAAACCCGGCTACGTGCCGGGTTTTTTTTGGACTGATTCCGCGCGCTATCTCTCCGC TTGTGCCTATTCCGGCGGCA
Product: phosphate transport system regulatory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MDRMHFGEHSSTQFNAALESIRNHLMEMGGLVEKQVVDALQALLQADSALAEKVIETEKKVDKLEILIDEECTKVLALRQ PAASDLRLIIAVSKAVSDLERIGDESAKIARMGLQLAEEGESPRGYVEVRHIGNHVRNMLRDALDAFARFDAHKALTVAA EDNEVDIEYASAMRSLATFMMEDPRSITRVLNIIWSLRALERIGDHARNIGEQVIYLVKGKDVRHISIDEIEEKLKS
Sequences:
>Translated_237_residues MDRMHFGEHSSTQFNAALESIRNHLMEMGGLVEKQVVDALQALLQADSALAEKVIETEKKVDKLEILIDEECTKVLALRQ PAASDLRLIIAVSKAVSDLERIGDESAKIARMGLQLAEEGESPRGYVEVRHIGNHVRNMLRDALDAFARFDAHKALTVAA EDNEVDIEYASAMRSLATFMMEDPRSITRVLNIIWSLRALERIGDHARNIGEQVIYLVKGKDVRHISIDEIEEKLKS >Mature_237_residues MDRMHFGEHSSTQFNAALESIRNHLMEMGGLVEKQVVDALQALLQADSALAEKVIETEKKVDKLEILIDEECTKVLALRQ PAASDLRLIIAVSKAVSDLERIGDESAKIARMGLQLAEEGESPRGYVEVRHIGNHVRNMLRDALDAFARFDAHKALTVAA EDNEVDIEYASAMRSLATFMMEDPRSITRVLNIIWSLRALERIGDHARNIGEQVIYLVKGKDVRHISIDEIEEKLKS
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=235, Percent_Identity=46.8085106382979, Blast_Score=222, Evalue=2e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 26584; Mature: 26584
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRMHFGEHSSTQFNAALESIRNHLMEMGGLVEKQVVDALQALLQADSALAEKVIETEKK CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDKLEILIDEECTKVLALRQPAASDLRLIIAVSKAVSDLERIGDESAKIARMGLQLAEEG HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC ESPRGYVEVRHIGNHVRNMLRDALDAFARFDAHKALTVAAEDNEVDIEYASAMRSLATFM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCHHHHHHHHHHHHHHH MEDPRSITRVLNIIWSLRALERIGDHARNIGEQVIYLVKGKDVRHISIDEIEEKLKS HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEECCHHHHHHHHCC >Mature Secondary Structure MDRMHFGEHSSTQFNAALESIRNHLMEMGGLVEKQVVDALQALLQADSALAEKVIETEKK CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDKLEILIDEECTKVLALRQPAASDLRLIIAVSKAVSDLERIGDESAKIARMGLQLAEEG HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC ESPRGYVEVRHIGNHVRNMLRDALDAFARFDAHKALTVAAEDNEVDIEYASAMRSLATFM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCHHHHHHHHHHHHHHH MEDPRSITRVLNIIWSLRALERIGDHARNIGEQVIYLVKGKDVRHISIDEIEEKLKS HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEECCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA