| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
Click here to switch to the map view.
The map label for this gene is 110835524
Identifier: 110835524
GI number: 110835524
Start: 3011168
End: 3011617
Strand: Reverse
Name: 110835524
Synonym: ABO_2663
Alternate gene names: NA
Gene position: 3011617-3011168 (Counterclockwise)
Preceding gene: 110835525
Following gene: 110835523
Centisome position: 96.52
GC content: 56.22
Gene sequence:
>450_bases ATGAGTGAATATGGCGCAACGGTGGCTTGGCATCTGCAGCGTGGTACCAGCTTTGATTATGAACACTTCAACCGGGATCA CGAATGGACCTTCGCTGGTGGTGAAGTGGTATCCGCTTCCGGGTCTCCGGAATTCTACGGCTGTGCCAATCGGGTCAATC CAGATGAAGCGGTCATTGCTGCCACCGCCAGCTGTCACATGCTTACCTTTCTGTCCATTGCCGCCAAGCGTGGCCTCACC GTGCTCAGCTATATCGATCAGCCGTTGGGAACGGTGGACAAGAATGAGGAAGGCCGCATGGCGATCACCCGAATCGTGCT GCGGCCTCGGGTGGTTTTCGATGGCCAAGAGCCTGATGGCCCCGCCTTGGAAAAGCTCCACGAGAGCGCCCATCGTAACT GCTTTGTGGCTAACTCATTGCGTGCGGATGTACGCATAGAACCGGTTTAG
Upstream 100 bases:
>100_bases CCCGCCCAAGGCGGCGGAGTAAATATTGATCTGCAACATGGTTGCCTTTCCTCTCTTCGCGGATCATGGTGAATATAAAA ATGAGAGAGGGAGTTTGATC
Downstream 100 bases:
>100_bases CCTGCCCAATTAAGCAAAGCCTGAAAGGCTCTGTAGAAGCGCCCTCCTGAGCACGATTTGAAGTGCCAATGCCAGCAGCC AAACCTGCCTTTGGGGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: OsmC-Like Protein; Redox Protein; OsmC/Ohr Family Protein; General Stress O; Osmc Family Protein; Redox Protein Regulator Of Disulfide Bond Formation; Truncated Hemoglobin; Regulator Of Disulfide Bond Formation; OsmC-Family Protein Like; Stress-Induced Protein OsmC-Like Protein; OsmC-Like Family; Osmotically Inducible Protein; Conserved Protein
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MSEYGATVAWHLQRGTSFDYEHFNRDHEWTFAGGEVVSASGSPEFYGCANRVNPDEAVIAATASCHMLTFLSIAAKRGLT VLSYIDQPLGTVDKNEEGRMAITRIVLRPRVVFDGQEPDGPALEKLHESAHRNCFVANSLRADVRIEPV
Sequences:
>Translated_149_residues MSEYGATVAWHLQRGTSFDYEHFNRDHEWTFAGGEVVSASGSPEFYGCANRVNPDEAVIAATASCHMLTFLSIAAKRGLT VLSYIDQPLGTVDKNEEGRMAITRIVLRPRVVFDGQEPDGPALEKLHESAHRNCFVANSLRADVRIEPV >Mature_148_residues SEYGATVAWHLQRGTSFDYEHFNRDHEWTFAGGEVVSASGSPEFYGCANRVNPDEAVIAATASCHMLTFLSIAAKRGLTV LSYIDQPLGTVDKNEEGRMAITRIVLRPRVVFDGQEPDGPALEKLHESAHRNCFVANSLRADVRIEPV
Specific function: Unknown
COG id: COG1764
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16465; Mature: 16333
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEYGATVAWHLQRGTSFDYEHFNRDHEWTFAGGEVVSASGSPEFYGCANRVNPDEAVIA CCCCCCEEEEEEECCCCCCHHHCCCCCCEEEECCEEEECCCCCCEEECCCCCCCCCEEEE ATASCHMLTFLSIAAKRGLTVLSYIDQPLGTVDKNEEGRMAITRIVLRPRVVFDGQEPDG EHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCEEEEHHHHCCEEEECCCCCCC PALEKLHESAHRNCFVANSLRADVRIEPV HHHHHHHHHHHCCEEEECCCCCCEEEECC >Mature Secondary Structure SEYGATVAWHLQRGTSFDYEHFNRDHEWTFAGGEVVSASGSPEFYGCANRVNPDEAVIA CCCCCEEEEEEECCCCCCHHHCCCCCCEEEECCEEEECCCCCCEEECCCCCCCCCEEEE ATASCHMLTFLSIAAKRGLTVLSYIDQPLGTVDKNEEGRMAITRIVLRPRVVFDGQEPDG EHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCEEEEHHHHCCEEEECCCCCCC PALEKLHESAHRNCFVANSLRADVRIEPV HHHHHHHHHHHCCEEEECCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA