Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110835505

Identifier: 110835505

GI number: 110835505

Start: 2989907

End: 2991757

Strand: Reverse

Name: 110835505

Synonym: ABO_2644

Alternate gene names: NA

Gene position: 2991757-2989907 (Counterclockwise)

Preceding gene: 110835506

Following gene: 110835504

Centisome position: 95.89

GC content: 56.24

Gene sequence:

>1851_bases
ATGAAGGGAACATTCAGAGTTGCCAGTTTGGCAGTGGCGGTAGCCATTGCCGGGTGCGGCGGAGATGGAAGTAGCGGGAG
TGACAGCCCTTCTACAGGTGCCGATAAATCAGGTAGTGCGGTCAAAGGCAGTGCGGTCAAGGGCCCGTTGGCGAACGCTG
CGGTGACGCTCTATCAACTGGATTTCAATGCTGCTGGCGGGCTTGGCGAGCAACTGGACACCGGCAGTACTGACAGGGAA
GCCGCATTTTCAGGGGTCAGCATCCCTGATGGAACAAGCGGAGAGGTGCTCGTAGAAGTGCAGGCGGATGCCGATACGTT
GGATCTCACTACGGGCCAGGCGCCGGTCATCACGCGATTGCTTTCTGTCACCTCGGCAGAGGCCGTTGCTGCCGGTGAGA
CCAATTACCCAACGCCACTAAGTACCTTGGTGGTGAACATGGCGCTGAGTAATGCGGACAGCAACACCAATGGCTTTATT
GGTGATACCGATGGAACCGTTACCGCCGCAGAGTGGACTGCCGCCTTGAAACTGGCCAAGAACAAGGTGCGTAGCCAGTT
CGGTTTCGGGCTTCTGGATAATAGCGTTGATTTGCTCTCTTCCCCGCCGCTGATCACTAGTGATCAGGACGATCAGGCGC
AGGTGGTCAAGCTGAGAACGGCGGTGGAAGCGGTCGCCGCGCTGATGGCGGATATGGCCAAAACAGCAAAGTTGGCGGAC
CCCGGTAGCACCGAAACGGCGGACTCCATGTTCAACGCATTGTCTGAAGACCTGAATGATGGTCAGGTTGATGGCAAGAG
TGGCGAGGCTGCCATTGCCTCTTTCGCCAACATTGCGGACGTTGTCGCGGAAGTAACTCAGAACCCTTCCTCCTTAACTA
TTCCCGGTTCTACCAAAACGGTATCTCAAGTTGCGTCAGTGGTGGCTGGTGAAACGCAAGATACAGGGGTCGACACCGAT
ACCTCCACGGCAGAGAACACCTCCCCAGTTGTTGAACCGGCGGAAGTGGAAAGTGACATCGACCTAGATGGCACGCCGGA
TACTAGCGATGCCGATATCGATGGTGATGGCCTGTTGAACGAACAGGACACCGCGCCCTACGACCCGGACCGCGATGAAG
ATGGTGTTGAGGATGGCACCGATGCCTTCCCTGACGACTCTTCTGAAACAACCGATACCGATGAAGACGGCGTAGGGGAT
AACACGGATAAGTTCCCTGAAGACCCAGCCGAAACTATCGACAGTGACGAAGATGGTGTTGGGGATAATGGCGATGTCTT
TCCGCAAGACCCAGCCGAGACTACAGACACGGATGGTGACGGCGTCGGCGACAACGCTGATGTTTTCCCCAACGATCCAG
ACGAAACCGTGGATAGGGATGAAGACGGCGTAGGGGATAATGGCGATGTCTTCCCTGAAGATCCGTCTGAAACGAGTGAC
GCGGATAATGACGGTGTCGGCGATAACAGTGACGCCTTCCCCAGTGATGCTTCCGAAACGATGGACAGTGATTCTGATGG
GGTTGGTGACAACGCAGACGCTTTCCCGAATGACCCCACCGAAGCTCTGGACAGCGACGGCGATGGCGTGGGGGACAATG
CGGATGCCTTCCCCGGTAACGCCAATGAAAGTGCTGACCGCGATAACGATGGTGTAGGCGATAACGAAGATGCCTTCCCT
GACGATGCTACCGAAAGCGAGGATGCGGACGGCGATGGATACGGCGCCAATACCGCAGACCCGGATGATGCTGATCCCTG
TAATCCGGATACCAATGCGCCTTCCTGCACAACTGAAACGCCAGGTGCAGTCTGGAATGAATTTGACTGGGATGAAGCCA
ACTGGCAGTGA

Upstream 100 bases:

>100_bases
AGGTTTTTTTGTTTTATACCTTAAATGGGTGATGTGCGCTCTTGTTGCTCAGGTTTAGTTTGGTGCTATACCAAAACTGG
GGTGATCGGAGACATCACAC

Downstream 100 bases:

>100_bases
GGCCATTGGTTAAAGGAAATAACCTTAGAGGGTAAAAGAGATGAAAAAAGTAATCCTGACAGGCCTCGCCGCAACTGTGA
TGAGTGCCAGCGCAATAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: OmpA-Like Transmembrane Domain-Containing Protein; Ricin B Lectin; ATPase; AAA ATPase Containing Von Willebrand Factor Type A; Collagenase Family Protein; Thrombospondin Type 3 Repeat Family; Dihydroxyacid Dehydratase/Phosphogluconate Dehydratase; Lipoprotein

Number of amino acids: Translated: 616; Mature: 616

Protein sequence:

>616_residues
MKGTFRVASLAVAVAIAGCGGDGSSGSDSPSTGADKSGSAVKGSAVKGPLANAAVTLYQLDFNAAGGLGEQLDTGSTDRE
AAFSGVSIPDGTSGEVLVEVQADADTLDLTTGQAPVITRLLSVTSAEAVAAGETNYPTPLSTLVVNMALSNADSNTNGFI
GDTDGTVTAAEWTAALKLAKNKVRSQFGFGLLDNSVDLLSSPPLITSDQDDQAQVVKLRTAVEAVAALMADMAKTAKLAD
PGSTETADSMFNALSEDLNDGQVDGKSGEAAIASFANIADVVAEVTQNPSSLTIPGSTKTVSQVASVVAGETQDTGVDTD
TSTAENTSPVVEPAEVESDIDLDGTPDTSDADIDGDGLLNEQDTAPYDPDRDEDGVEDGTDAFPDDSSETTDTDEDGVGD
NTDKFPEDPAETIDSDEDGVGDNGDVFPQDPAETTDTDGDGVGDNADVFPNDPDETVDRDEDGVGDNGDVFPEDPSETSD
ADNDGVGDNSDAFPSDASETMDSDSDGVGDNADAFPNDPTEALDSDGDGVGDNADAFPGNANESADRDNDGVGDNEDAFP
DDATESEDADGDGYGANTADPDDADPCNPDTNAPSCTTETPGAVWNEFDWDEANWQ

Sequences:

>Translated_616_residues
MKGTFRVASLAVAVAIAGCGGDGSSGSDSPSTGADKSGSAVKGSAVKGPLANAAVTLYQLDFNAAGGLGEQLDTGSTDRE
AAFSGVSIPDGTSGEVLVEVQADADTLDLTTGQAPVITRLLSVTSAEAVAAGETNYPTPLSTLVVNMALSNADSNTNGFI
GDTDGTVTAAEWTAALKLAKNKVRSQFGFGLLDNSVDLLSSPPLITSDQDDQAQVVKLRTAVEAVAALMADMAKTAKLAD
PGSTETADSMFNALSEDLNDGQVDGKSGEAAIASFANIADVVAEVTQNPSSLTIPGSTKTVSQVASVVAGETQDTGVDTD
TSTAENTSPVVEPAEVESDIDLDGTPDTSDADIDGDGLLNEQDTAPYDPDRDEDGVEDGTDAFPDDSSETTDTDEDGVGD
NTDKFPEDPAETIDSDEDGVGDNGDVFPQDPAETTDTDGDGVGDNADVFPNDPDETVDRDEDGVGDNGDVFPEDPSETSD
ADNDGVGDNSDAFPSDASETMDSDSDGVGDNADAFPNDPTEALDSDGDGVGDNADAFPGNANESADRDNDGVGDNEDAFP
DDATESEDADGDGYGANTADPDDADPCNPDTNAPSCTTETPGAVWNEFDWDEANWQ
>Mature_616_residues
MKGTFRVASLAVAVAIAGCGGDGSSGSDSPSTGADKSGSAVKGSAVKGPLANAAVTLYQLDFNAAGGLGEQLDTGSTDRE
AAFSGVSIPDGTSGEVLVEVQADADTLDLTTGQAPVITRLLSVTSAEAVAAGETNYPTPLSTLVVNMALSNADSNTNGFI
GDTDGTVTAAEWTAALKLAKNKVRSQFGFGLLDNSVDLLSSPPLITSDQDDQAQVVKLRTAVEAVAALMADMAKTAKLAD
PGSTETADSMFNALSEDLNDGQVDGKSGEAAIASFANIADVVAEVTQNPSSLTIPGSTKTVSQVASVVAGETQDTGVDTD
TSTAENTSPVVEPAEVESDIDLDGTPDTSDADIDGDGLLNEQDTAPYDPDRDEDGVEDGTDAFPDDSSETTDTDEDGVGD
NTDKFPEDPAETIDSDEDGVGDNGDVFPQDPAETTDTDGDGVGDNADVFPNDPDETVDRDEDGVGDNGDVFPEDPSETSD
ADNDGVGDNSDAFPSDASETMDSDSDGVGDNADAFPNDPTEALDSDGDGVGDNADAFPGNANESADRDNDGVGDNEDAFP
DDATESEDADGDGYGANTADPDDADPCNPDTNAPSCTTETPGAVWNEFDWDEANWQ

Specific function: Unknown

COG id: COG5271

COG function: function code R; AAA ATPase containing von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62707; Mature: 62707

Theoretical pI: Translated: 3.20; Mature: 3.20

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGTFRVASLAVAVAIAGCGGDGSSGSDSPSTGADKSGSAVKGSAVKGPLANAAVTLYQL
CCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE
DFNAAGGLGEQLDTGSTDREAAFSGVSIPDGTSGEVLVEVQADADTLDLTTGQAPVITRL
ECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCCEEEECCCCHHHHHHH
LSVTSAEAVAAGETNYPTPLSTLVVNMALSNADSNTNGFIGDTDGTVTAAEWTAALKLAK
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHH
NKVRSQFGFGLLDNSVDLLSSPPLITSDQDDQAQVVKLRTAVEAVAALMADMAKTAKLAD
HHHHHHHCCCHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PGSTETADSMFNALSEDLNDGQVDGKSGEAAIASFANIADVVAEVTQNPSSLTIPGSTKT
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCHHH
VSQVASVVAGETQDTGVDTDTSTAENTSPVVEPAEVESDIDLDGTPDTSDADIDGDGLLN
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC
EQDTAPYDPDRDEDGVEDGTDAFPDDSSETTDTDEDGVGDNTDKFPEDPAETIDSDEDGV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC
GDNGDVFPQDPAETTDTDGDGVGDNADVFPNDPDETVDRDEDGVGDNGDVFPEDPSETSD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC
ADNDGVGDNSDAFPSDASETMDSDSDGVGDNADAFPNDPTEALDSDGDGVGDNADAFPGN
CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCC
ANESADRDNDGVGDNEDAFPDDATESEDADGDGYGANTADPDDADPCNPDTNAPSCTTET
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PGAVWNEFDWDEANWQ
CCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKGTFRVASLAVAVAIAGCGGDGSSGSDSPSTGADKSGSAVKGSAVKGPLANAAVTLYQL
CCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE
DFNAAGGLGEQLDTGSTDREAAFSGVSIPDGTSGEVLVEVQADADTLDLTTGQAPVITRL
ECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCCEEEECCCCHHHHHHH
LSVTSAEAVAAGETNYPTPLSTLVVNMALSNADSNTNGFIGDTDGTVTAAEWTAALKLAK
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHH
NKVRSQFGFGLLDNSVDLLSSPPLITSDQDDQAQVVKLRTAVEAVAALMADMAKTAKLAD
HHHHHHHCCCHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PGSTETADSMFNALSEDLNDGQVDGKSGEAAIASFANIADVVAEVTQNPSSLTIPGSTKT
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCHHH
VSQVASVVAGETQDTGVDTDTSTAENTSPVVEPAEVESDIDLDGTPDTSDADIDGDGLLN
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC
EQDTAPYDPDRDEDGVEDGTDAFPDDSSETTDTDEDGVGDNTDKFPEDPAETIDSDEDGV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC
GDNGDVFPQDPAETTDTDGDGVGDNADVFPNDPDETVDRDEDGVGDNGDVFPEDPSETSD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC
ADNDGVGDNSDAFPSDASETMDSDSDGVGDNADAFPNDPTEALDSDGDGVGDNADAFPGN
CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCC
ANESADRDNDGVGDNEDAFPDDATESEDADGDGYGANTADPDDADPCNPDTNAPSCTTET
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PGAVWNEFDWDEANWQ
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA