Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110835470

Identifier: 110835470

GI number: 110835470

Start: 2952826

End: 2953470

Strand: Direct

Name: 110835470

Synonym: ABO_2609

Alternate gene names: NA

Gene position: 2952826-2953470 (Clockwise)

Preceding gene: 110835467

Following gene: 110835472

Centisome position: 94.64

GC content: 52.71

Gene sequence:

>645_bases
ATGCATCTAACCGCAGATACACTCAACGATCTACCGCGCGGTCAACGAATCAACCTTGTTAACAGCTTATCCGGCTTCAA
AAGCGCCAATCTTGTCGGCACCTGCTCAGACGGTGGAGAGGAAAACCTGGCCATGGTCGGCTCTTGTTTCCACCTCGGTG
CCGACCCTGCCCTGATGGGGATGATCATGCGTCCTCATTCAGTTGATAGACACAGTCTCGAGTACCTAGCGGCGACTGGA
GTTTATACTCTGAACCAAGTGCATGAGGATATCCTAAAGGCGGCACATCAGACCTCTGCTCGCTACCCCCGTGAGATTTC
CGAATTTACTGCCACCGGGTTGACGCCATCTTACCTACCAGCTTTCCAGGCACCCTTCGTGGAAGAGGCGCGGATTAAAT
TGGGAATGGTGGTGATCGAAACTCAAACGTTAGCCGTTAACGATACCGTTTTGGTGATCGGCGCCATTGAGCATATTTTA
CTTCCAGACAATGCCGTAGAGAACGATGGCTTTGTAAATATTGAACGGGCAGGCACGGTGGCTTTATCCGGGCTCGATAG
CTACCACCGCAGCCAATCCATCGGGCGGCTCAGCTATGCCAAACCAGACAAACCCACGCACTGGCTACACGACAACGCGA
CATGA

Upstream 100 bases:

>100_bases
AATCTGATCGCGATCGAAAGGATTAGCCATAACCGGTAACGGGCCTCCACGGTTTGCTCACGGCAGGCACTGATAATACG
GGCCTAGGAGGAATCACACC

Downstream 100 bases:

>100_bases
TTACGGAACCGGTGAGGGCTGCGTCAGTGCCACCCAGGCCCACCAGCCGGTCAACACCAGCATGGGCAGCGATATCAACA
ACCCCCACATTACTAAGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MHLTADTLNDLPRGQRINLVNSLSGFKSANLVGTCSDGGEENLAMVGSCFHLGADPALMGMIMRPHSVDRHSLEYLAATG
VYTLNQVHEDILKAAHQTSARYPREISEFTATGLTPSYLPAFQAPFVEEARIKLGMVVIETQTLAVNDTVLVIGAIEHIL
LPDNAVENDGFVNIERAGTVALSGLDSYHRSQSIGRLSYAKPDKPTHWLHDNAT

Sequences:

>Translated_214_residues
MHLTADTLNDLPRGQRINLVNSLSGFKSANLVGTCSDGGEENLAMVGSCFHLGADPALMGMIMRPHSVDRHSLEYLAATG
VYTLNQVHEDILKAAHQTSARYPREISEFTATGLTPSYLPAFQAPFVEEARIKLGMVVIETQTLAVNDTVLVIGAIEHIL
LPDNAVENDGFVNIERAGTVALSGLDSYHRSQSIGRLSYAKPDKPTHWLHDNAT
>Mature_214_residues
MHLTADTLNDLPRGQRINLVNSLSGFKSANLVGTCSDGGEENLAMVGSCFHLGADPALMGMIMRPHSVDRHSLEYLAATG
VYTLNQVHEDILKAAHQTSARYPREISEFTATGLTPSYLPAFQAPFVEEARIKLGMVVIETQTLAVNDTVLVIGAIEHIL
LPDNAVENDGFVNIERAGTVALSGLDSYHRSQSIGRLSYAKPDKPTHWLHDNAT

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23236; Mature: 23236

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLTADTLNDLPRGQRINLVNSLSGFKSANLVGTCSDGGEENLAMVGSCFHLGADPALMG
CCCCHHHHHHCCCCCEEHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCHHHHH
MIMRPHSVDRHSLEYLAATGVYTLNQVHEDILKAAHQTSARYPREISEFTATGLTPSYLP
HHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHCC
AFQAPFVEEARIKLGMVVIETQTLAVNDTVLVIGAIEHILLPDNAVENDGFVNIERAGTV
HHCCCCHHHHHEEEEEEEEEEEEEEECCCEEEEECHHHEECCCCCCCCCCEEEEECCCEE
ALSGLDSYHRSQSIGRLSYAKPDKPTHWLHDNAT
EECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHLTADTLNDLPRGQRINLVNSLSGFKSANLVGTCSDGGEENLAMVGSCFHLGADPALMG
CCCCHHHHHHCCCCCEEHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCHHHHH
MIMRPHSVDRHSLEYLAATGVYTLNQVHEDILKAAHQTSARYPREISEFTATGLTPSYLP
HHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHCC
AFQAPFVEEARIKLGMVVIETQTLAVNDTVLVIGAIEHILLPDNAVENDGFVNIERAGTV
HHCCCCHHHHHEEEEEEEEEEEEEEECCCEEEEECHHHEECCCCCCCCCCEEEEECCCEE
ALSGLDSYHRSQSIGRLSYAKPDKPTHWLHDNAT
EECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA