| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is thiG [H]
Identifier: 110835433
GI number: 110835433
Start: 2912974
End: 2913753
Strand: Direct
Name: thiG [H]
Synonym: ABO_2572
Alternate gene names: 110835433
Gene position: 2912974-2913753 (Clockwise)
Preceding gene: 110835432
Following gene: 110835434
Centisome position: 93.36
GC content: 56.67
Gene sequence:
>780_bases ATGTCCGATCTGCTTACCATTGCCGGAAAAACCTACTCCTCCCGCCTGCTGATCGGCACCGGCAAGTACAAAGACTTTGA CGAAACCCGCGAATCCATCGAAATCAGCGGCGCGGAAATCGTTACCGTCGCCATTCGCCGCACCAATATTGGCCAAAACG CAGACGAACCCAATCTGCTCGATTTCGTCAGCCCCGACAAATACACCATTTTGCCTAACACCGCCGGCTGCTTCTCCGCC GAAGATGCCGTGCGTTGCTGCAAACTGGCTCGGGAGCTGCTTGATGGCCATAGCTTGGTCAAATTGGAGGTACTCGGCGA TCAGAAAACTCTGTACCCGAACATCACCCATACCTTGCACGCCGCCCGCGAACTGATCGACGACGGCTTCAACGTCATGG TCTACACCAACGACGACCCCATCGTGGCGAAAGAGCTGGAAGATATGGGGTGTGTGGCAGTAATGCCGCTGGGCTCATTA ATCGGCTCCGGGCTTGGCATCCTTAACCCTCACAACATCAAGCTCATCATGGAAGAAGCCAACGTGCCCATCATTGTCGA TGCCGGCGTCGGCACCGCTTCCGATGCCGCACTGGCCATGGAAATGGGTTGCGATGGGGTGCTACTCAACTCTGCCGTGG CCCATGCACAAAAGCCGGTACTAATGGCTTCCGCCATGAAGAAAGCCATTGAAGCTGGCCGCGAAGCTTTTCTGGCCGGG CGCATGCCTCGCAAGGCCTATGCCTCTGCCTCATCGCCACTGGATGGTCTGAGCCGCTAA
Upstream 100 bases:
>100_bases CGCCTTAGCCAATAGGTCCAGGCGCCCCCTGAGTTCCTGTGCAGGTTCCAAGGCTGCCGGAAAAACCTGATAAAAGACGT TAATACCCTAAGAGGCCCCC
Downstream 100 bases:
>100_bases GCCTTTCGACAGACAAAAAAACGGCGCCACTCTGGAGGGAGTTGTCGCCAAGGGGGGAAATCATCGATGCTCGTGCACAT AAGGGCAGAGTTGCGTTCAC
Product: thiazole synthase
Products: 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate; 4-hydroxy-benzyl-alcohol; C1 of tyrosine; ThiS protein [C]
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MSDLLTIAGKTYSSRLLIGTGKYKDFDETRESIEISGAEIVTVAIRRTNIGQNADEPNLLDFVSPDKYTILPNTAGCFSA EDAVRCCKLARELLDGHSLVKLEVLGDQKTLYPNITHTLHAARELIDDGFNVMVYTNDDPIVAKELEDMGCVAVMPLGSL IGSGLGILNPHNIKLIMEEANVPIIVDAGVGTASDAALAMEMGCDGVLLNSAVAHAQKPVLMASAMKKAIEAGREAFLAG RMPRKAYASASSPLDGLSR
Sequences:
>Translated_259_residues MSDLLTIAGKTYSSRLLIGTGKYKDFDETRESIEISGAEIVTVAIRRTNIGQNADEPNLLDFVSPDKYTILPNTAGCFSA EDAVRCCKLARELLDGHSLVKLEVLGDQKTLYPNITHTLHAARELIDDGFNVMVYTNDDPIVAKELEDMGCVAVMPLGSL IGSGLGILNPHNIKLIMEEANVPIIVDAGVGTASDAALAMEMGCDGVLLNSAVAHAQKPVLMASAMKKAIEAGREAFLAG RMPRKAYASASSPLDGLSR >Mature_258_residues SDLLTIAGKTYSSRLLIGTGKYKDFDETRESIEISGAEIVTVAIRRTNIGQNADEPNLLDFVSPDKYTILPNTAGCFSAE DAVRCCKLARELLDGHSLVKLEVLGDQKTLYPNITHTLHAARELIDDGFNVMVYTNDDPIVAKELEDMGCVAVMPLGSLI GSGLGILNPHNIKLIMEEANVPIIVDAGVGTASDAALAMEMGCDGVLLNSAVAHAQKPVLMASAMKKAIEAGREAFLAGR MPRKAYASASSPLDGLSR
Specific function: Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S [H]
COG id: COG2022
COG function: function code H; Uncharacterized enzyme of thiazole biosynthesis
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiG family [H]
Homologues:
Organism=Escherichia coli, GI48994993, Length=254, Percent_Identity=43.3070866141732, Blast_Score=200, Evalue=9e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR008867 [H]
Pfam domain/function: PF05690 ThiG [H]
EC number: NA
Molecular weight: Translated: 27605; Mature: 27474
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLLTIAGKTYSSRLLIGTGKYKDFDETRESIEISGAEIVTVAIRRTNIGQNADEPNLL CCCCEEECCCCCCCEEEEECCCCCCHHHHHHHEEECCCEEEEEEEEECCCCCCCCCCCEE DFVSPDKYTILPNTAGCFSAEDAVRCCKLARELLDGHSLVKLEVLGDQKTLYPNITHTLH ECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEECCCHHHHHH AARELIDDGFNVMVYTNDDPIVAKELEDMGCVAVMPLGSLIGSGLGILNPHNIKLIMEEA HHHHHHHCCCEEEEEECCCCCHHHHHHCCCCEEEEEHHHHHHCCCCCCCCCCEEEEEECC NVPIIVDAGVGTASDAALAMEMGCDGVLLNSAVAHAQKPVLMASAMKKAIEAGREAFLAG CCCEEEECCCCCCCCHHEEECCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC RMPRKAYASASSPLDGLSR CCCHHHHHCCCCCCCCCCC >Mature Secondary Structure SDLLTIAGKTYSSRLLIGTGKYKDFDETRESIEISGAEIVTVAIRRTNIGQNADEPNLL CCCEEECCCCCCCEEEEECCCCCCHHHHHHHEEECCCEEEEEEEEECCCCCCCCCCCEE DFVSPDKYTILPNTAGCFSAEDAVRCCKLARELLDGHSLVKLEVLGDQKTLYPNITHTLH ECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEECCCHHHHHH AARELIDDGFNVMVYTNDDPIVAKELEDMGCVAVMPLGSLIGSGLGILNPHNIKLIMEEA HHHHHHHCCCEEEEEECCCCCHHHHHHCCCCEEEEEHHHHHHCCCCCCCCCCEEEEEECC NVPIIVDAGVGTASDAALAMEMGCDGVLLNSAVAHAQKPVLMASAMKKAIEAGREAFLAG CCCEEEECCCCCCCCHHEEECCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC RMPRKAYASASSPLDGLSR CCCHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: deoxyxylulose-5-phosphate; ThiS-COSH; L-tyrosine [C]
Specific reaction: deoxyxylulose-5-phosphate + ThiS-COSH + L-tyrosine = 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate + 4-hydroxy-benzyl-alcohol + C1 of tyrosine + ThiS protein [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA