| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is yqiC [C]
Identifier: 110835392
GI number: 110835392
Start: 2870114
End: 2870362
Strand: Direct
Name: yqiC [C]
Synonym: ABO_2531
Alternate gene names: 110835392
Gene position: 2870114-2870362 (Clockwise)
Preceding gene: 110835387
Following gene: 110835393
Centisome position: 91.99
GC content: 57.83
Gene sequence:
>249_bases ATGCCTGATCAACCCTTCATCGACCGCCTTATGGCCGACATCAGCCGCCGCCTGCCTACTGACCTGGGCGGGTTGCGTAG CGAAGTAGAACGCAACGTACGCGGCGTGCTGGCAGAAACCGTCAGCCGGCTGGATCTGATTACCCGTGAAGAGTTCGATA TCCAGCAGCAAGTATTGCTGCGCACCCGCGAAAAACTGGAAGCGCTGGAGAAACAGGTAGCCGAACTGGAAAAAGCACAG GACGCCTGA
Upstream 100 bases:
>100_bases CAGGATCCAGGTTGGTGCAGAATGTCTGCCTGAGCAACCCGGTGCCTCACCCCCGCACACCGTGCTACCATCCGCGCATC ATTACAAGGACGCCGTTGTT
Downstream 100 bases:
>100_bases ACTACAGCACACTTTCACTGTGGAAGCTTGCCTGCAAGCGCCCCCGGCTGCAGCCATCGCTTGGTGCGCCCAGCCCTTTT CCTACAGCCAGCATCTACAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MPDQPFIDRLMADISRRLPTDLGGLRSEVERNVRGVLAETVSRLDLITREEFDIQQQVLLRTREKLEALEKQVAELEKAQ DA
Sequences:
>Translated_82_residues MPDQPFIDRLMADISRRLPTDLGGLRSEVERNVRGVLAETVSRLDLITREEFDIQQQVLLRTREKLEALEKQVAELEKAQ DA >Mature_81_residues PDQPFIDRLMADISRRLPTDLGGLRSEVERNVRGVLAETVSRLDLITREEFDIQQQVLLRTREKLEALEKQVAELEKAQD A
Specific function: Unknown
COG id: COG2960
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082201, Length=77, Percent_Identity=42.8571428571429, Blast_Score=63, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9461; Mature: 9330
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDQPFIDRLMADISRRLPTDLGGLRSEVERNVRGVLAETVSRLDLITREEFDIQQQVLL CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTREKLEALEKQVAELEKAQDA HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PDQPFIDRLMADISRRLPTDLGGLRSEVERNVRGVLAETVSRLDLITREEFDIQQQVLL CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTREKLEALEKQVAELEKAQDA HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA