Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110835128

Identifier: 110835128

GI number: 110835128

Start: 2587546

End: 2589081

Strand: Reverse

Name: 110835128

Synonym: ABO_2267

Alternate gene names: NA

Gene position: 2589081-2587546 (Counterclockwise)

Preceding gene: 110835129

Following gene: 110835127

Centisome position: 82.98

GC content: 54.49

Gene sequence:

>1536_bases
ATGGGTTCTGTGAAGTTGCAAGCGCGGTTGCTTGCCGTTTTCCTTTTGTTGCTGGGCGGCGGAAGTATTGCTTATCAGCT
GTTGGTGCAAAATGTGCCGCTGAGTCAGGATGAGAAAGACCCGGTTTGGGTGGTCGATTCTCAGGTGTCTTTTGTCGCAA
AGGCCAATAAGCCTGTCAAAGTACGTATGTTTGTGCCACCGCTGGGGGCTGGCTATACCACTCTTAACGAGAGTTTTATT
TCCAATAATTACGGCGTAAATGTGAATGTGGATAAGGGTAACCGCCAGGTTACTTGGTCATCCCGCCGCGCCGAAGGCAA
TCAGTACCTCTATTACCGCCTTATGTTGACTCCTCGCTATGCGGATGTGCCGGAGAAGGATCCGGGGCCCCAATTCCGGC
CTGCGCCTACTCTGGATGGCCCAGAAAAGCTGGCTGCGGACGCGTTGCTTGAGCCTATTCGTCAGCACTCAGCGGATGTG
GAAACCTTTATCAGTGAGACCATCAAGCGGGTTAATGAGCTTGAAAACGATAATGTTCAGCTTCTGCTGGGCAGCGATGT
AAGTCCGGAGAACCGGGCTAAAGTGATCGATCTGCTGCTGGCGGTGGCGCATATTCCTGCGGAGCCGGTGCATACCTTGC
GGCTGGCGGAGAGCCAAGGGCAGCAACCTGAGCTTTGGTTGCGTAGTTTTAACGGCAAGGAATGGCTCTATTTCAACCCG
CTCAATGGTCAGCAGGGGCTGCCGGATGATCGTCTGGTTTGGTGGAGCGGGCCTGGGCCGCTGTTGAATATCGAAGGCGG
CAAGTCTGCGGATGTGAGCTTCAGCGTGCACGAAAACGAAATGAGCGCGCTGCAGTTGGCTCAGTCTCTACGTCTGAAAG
ACGTGAGTAGCTTTATTGATTTCTCCTTGTATGAACTACCGCTTCCTGCTCAGCAGCTGTACCGCATTCTGGTGATGATC
CCGGTGGGGGTACTGCTGGTGCTGTTTATCCGTTCTCTTATCGGTATGGAAACCCTGGGTACCTTTACACCCGTGTTGAT
CGCCTTGGCCTTCCGCGAGACGCAAGTGGTCTGGGGGGGGTTGTTGTTTACGTCCATCACCGCCATCGGGCTGTCTGTGC
GCTCCTATCTCGAACATCTTAAATTACAGTTATTGCCCCGGCTTTCCGTGGTGCTTACCTTTGTGGTGATCGCTATGGCA
CTGATTAGCCTGCTGGGCTACAAGCTGGGCATCGGTTCAGGTTTGTCGGTGGCGCTGTTCCCTATGGTGATTCTGACCAT
GGTGATCGAGCGGACGTCCATCGTTTGGGAAGAGCGTGGCGGGACCCAGTCCTTGAAAGTGGCACTGGGAACGCTGGTGG
CGGCGATTTTCTGCCACTTGCTGATGGTGTGGCAGCCGCTGGTGTATTTCGTGTTCACCTTCCCAGGCGTGCTGCTTTGC
CTGGCGGCCATTATGGTATTGATGGGCCATTACCGTGGCTATCGCCTCACGGAGCTGTTGCGTTTTCGTGCCATGGTGGA
CGGGGATAAGCACTAA

Upstream 100 bases:

>100_bases
CGTCGTTATCAATGGCGGCTGGAGAGCCTGATTGTCAGGACAGTAAGGATAATGTTGTCGAAAGCGACGACCAAACGATG
GAGGCTGCCGAGGCGCTATA

Downstream 100 bases:

>100_bases
TGTTCTGGTCTAAAACCCGAAAAGCCCTGCGTGCCCGTGGTGTGATGGGCATTAACCAACGGAACGGCGATTACATTCTT
CGCTACAATAAGCGCAGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Membrane-Associated HD Superfamily Hydrolase; GoNADoliberin III-Like Protein; Transglutaminase-Like; Transglutaminase Domain-Containing Protein

Number of amino acids: Translated: 511; Mature: 510

Protein sequence:

>511_residues
MGSVKLQARLLAVFLLLLGGGSIAYQLLVQNVPLSQDEKDPVWVVDSQVSFVAKANKPVKVRMFVPPLGAGYTTLNESFI
SNNYGVNVNVDKGNRQVTWSSRRAEGNQYLYYRLMLTPRYADVPEKDPGPQFRPAPTLDGPEKLAADALLEPIRQHSADV
ETFISETIKRVNELENDNVQLLLGSDVSPENRAKVIDLLLAVAHIPAEPVHTLRLAESQGQQPELWLRSFNGKEWLYFNP
LNGQQGLPDDRLVWWSGPGPLLNIEGGKSADVSFSVHENEMSALQLAQSLRLKDVSSFIDFSLYELPLPAQQLYRILVMI
PVGVLLVLFIRSLIGMETLGTFTPVLIALAFRETQVVWGGLLFTSITAIGLSVRSYLEHLKLQLLPRLSVVLTFVVIAMA
LISLLGYKLGIGSGLSVALFPMVILTMVIERTSIVWEERGGTQSLKVALGTLVAAIFCHLLMVWQPLVYFVFTFPGVLLC
LAAIMVLMGHYRGYRLTELLRFRAMVDGDKH

Sequences:

>Translated_511_residues
MGSVKLQARLLAVFLLLLGGGSIAYQLLVQNVPLSQDEKDPVWVVDSQVSFVAKANKPVKVRMFVPPLGAGYTTLNESFI
SNNYGVNVNVDKGNRQVTWSSRRAEGNQYLYYRLMLTPRYADVPEKDPGPQFRPAPTLDGPEKLAADALLEPIRQHSADV
ETFISETIKRVNELENDNVQLLLGSDVSPENRAKVIDLLLAVAHIPAEPVHTLRLAESQGQQPELWLRSFNGKEWLYFNP
LNGQQGLPDDRLVWWSGPGPLLNIEGGKSADVSFSVHENEMSALQLAQSLRLKDVSSFIDFSLYELPLPAQQLYRILVMI
PVGVLLVLFIRSLIGMETLGTFTPVLIALAFRETQVVWGGLLFTSITAIGLSVRSYLEHLKLQLLPRLSVVLTFVVIAMA
LISLLGYKLGIGSGLSVALFPMVILTMVIERTSIVWEERGGTQSLKVALGTLVAAIFCHLLMVWQPLVYFVFTFPGVLLC
LAAIMVLMGHYRGYRLTELLRFRAMVDGDKH
>Mature_510_residues
GSVKLQARLLAVFLLLLGGGSIAYQLLVQNVPLSQDEKDPVWVVDSQVSFVAKANKPVKVRMFVPPLGAGYTTLNESFIS
NNYGVNVNVDKGNRQVTWSSRRAEGNQYLYYRLMLTPRYADVPEKDPGPQFRPAPTLDGPEKLAADALLEPIRQHSADVE
TFISETIKRVNELENDNVQLLLGSDVSPENRAKVIDLLLAVAHIPAEPVHTLRLAESQGQQPELWLRSFNGKEWLYFNPL
NGQQGLPDDRLVWWSGPGPLLNIEGGKSADVSFSVHENEMSALQLAQSLRLKDVSSFIDFSLYELPLPAQQLYRILVMIP
VGVLLVLFIRSLIGMETLGTFTPVLIALAFRETQVVWGGLLFTSITAIGLSVRSYLEHLKLQLLPRLSVVLTFVVIAMAL
ISLLGYKLGIGSGLSVALFPMVILTMVIERTSIVWEERGGTQSLKVALGTLVAAIFCHLLMVWQPLVYFVFTFPGVLLCL
AAIMVLMGHYRGYRLTELLRFRAMVDGDKH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56751; Mature: 56620

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSVKLQARLLAVFLLLLGGGSIAYQLLVQNVPLSQDEKDPVWVVDSQVSFVAKANKPVK
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHEECCCCEE
VRMFVPPLGAGYTTLNESFISNNYGVNVNVDKGNRQVTWSSRRAEGNQYLYYRLMLTPRY
EEEEECCCCCCHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCCCCEEEEEEEEECCCC
ADVPEKDPGPQFRPAPTLDGPEKLAADALLEPIRQHSADVETFISETIKRVNELENDNVQ
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEE
LLLGSDVSPENRAKVIDLLLAVAHIPAEPVHTLRLAESQGQQPELWLRSFNGKEWLYFNP
EEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHCCCCCEEEEEEC
LNGQQGLPDDRLVWWSGPGPLLNIEGGKSADVSFSVHENEMSALQLAQSLRLKDVSSFID
CCCCCCCCCCCEEEECCCCCEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHC
FSLYELPLPAQQLYRILVMIPVGVLLVLFIRSLIGMETLGTFTPVLIALAFRETQVVWGG
CHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLFTSITAIGLSVRSYLEHLKLQLLPRLSVVLTFVVIAMALISLLGYKLGIGSGLSVALF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
PMVILTMVIERTSIVWEERGGTQSLKVALGTLVAAIFCHLLMVWQPLVYFVFTFPGVLLC
HHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAIMVLMGHYRGYRLTELLRFRAMVDGDKH
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GSVKLQARLLAVFLLLLGGGSIAYQLLVQNVPLSQDEKDPVWVVDSQVSFVAKANKPVK
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHEECCCCEE
VRMFVPPLGAGYTTLNESFISNNYGVNVNVDKGNRQVTWSSRRAEGNQYLYYRLMLTPRY
EEEEECCCCCCHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCCCCEEEEEEEEECCCC
ADVPEKDPGPQFRPAPTLDGPEKLAADALLEPIRQHSADVETFISETIKRVNELENDNVQ
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEE
LLLGSDVSPENRAKVIDLLLAVAHIPAEPVHTLRLAESQGQQPELWLRSFNGKEWLYFNP
EEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHCCCCCEEEEEEC
LNGQQGLPDDRLVWWSGPGPLLNIEGGKSADVSFSVHENEMSALQLAQSLRLKDVSSFID
CCCCCCCCCCCEEEECCCCCEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHC
FSLYELPLPAQQLYRILVMIPVGVLLVLFIRSLIGMETLGTFTPVLIALAFRETQVVWGG
CHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLFTSITAIGLSVRSYLEHLKLQLLPRLSVVLTFVVIAMALISLLGYKLGIGSGLSVALF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
PMVILTMVIERTSIVWEERGGTQSLKVALGTLVAAIFCHLLMVWQPLVYFVFTFPGVLLC
HHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAIMVLMGHYRGYRLTELLRFRAMVDGDKH
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA