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The map label for this gene is yfhR [H]

Identifier: 110835114

GI number: 110835114

Start: 2572570

End: 2573517

Strand: Reverse

Name: yfhR [H]

Synonym: ABO_2253

Alternate gene names: 110835114

Gene position: 2573517-2572570 (Counterclockwise)

Preceding gene: 110835115

Following gene: 110835101

Centisome position: 82.48

GC content: 56.86

Gene sequence:

>948_bases
ATGGCGATGGTATTACGATTAAGCACAGCGCTTCTGCTGAGCCTGCTGCTGGTAGGGTGTAGCAAGCTGTTTTTCTACCC
CATGTCTGCGTGGGTGCAGAACCCAGAAAACCAAGGGCTGGAGTACGAGGATATTGTGCTGATACACCCGCGCGGTATGC
GTATTCATGGCTGGTGGTTGCCGGCGGCCAATGATGCCCCAGCCCGTGGCACGGTCTATTTCCTGCACGGTAATGCCCAG
AATATCAGCACTCACTTGGCCAACGTGCAGTGGCTGCCGGCGCAGGGCTATAACGTATTTTTGCTGGATTACCGAGGTTA
TGGGTTGTCGGAAGGCAAGCCGCGTTTGCCGGAAGCGCTCGATGATGTGCAGTTGGGCCTGGATTGGCTACGCCATGCCA
AACGCACGGAGGGTGCGCCGTTGGTCGTGTTCGGGCAGAGCCTGGGCGCTTCCATGGTCGCTAGCGTTTTGGGTGAAAAA
GGCAACGCTGGTGCGGCGGACTGTGTGATCCTGGAAGCCGCGTTTGCCAGTTACCGAGATATTACCAGCGATGTAATGAA
ACGTAGTTGGCTGCTGTGGCCATTACGTTGGATGGTGGTCCCTGCAATGCCTGATCGCGAACTGGACCCGGAAGTACGAG
TGGCCGGCATTAAGCCAACGCCTTTGTTGGTGATGCATAGCGTGGACGACCCCGTGATTCCCTATGCTCACGGTGAGCGG
CTTTATGCGGCCGCACAGCAACCCAAAACCTTCCAAAAACTGCGTGGAGGCCATACCGAAAGCTCTCGTGACCCGGCGGT
GCAGCAGCGGTTGGTGGATTTTATGCAGGATAATAATTGTGCCGCTAAGGTGGCGGAAGTCGAACAGCCGGTGGCGCCAT
CAGACGATGAATCTCCCCCGGAGTTGTTTGTGCCTCTTCCCGCTCCCGACAAAGGGTATCGGTTCTAG

Upstream 100 bases:

>100_bases
AGTTTGCGGTGCAGTGGGCAATGACCCGCCAGCATGGCTTGCGCGCTTCTCTTGCGCGTGAGAACCGCAGGGGCGGTTAT
GATGATGAGTTCAAACTCCA

Downstream 100 bases:

>100_bases
TCTTGCGTTTGAAAAAAACGTGTTGCGCGTAGTGAATGGCGAGGGTTTTCGAGATGCTCGCAGGCCAGCCAGCATCATTA
TCGTCTCACATTCTGAGGAC

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MAMVLRLSTALLLSLLLVGCSKLFFYPMSAWVQNPENQGLEYEDIVLIHPRGMRIHGWWLPAANDAPARGTVYFLHGNAQ
NISTHLANVQWLPAQGYNVFLLDYRGYGLSEGKPRLPEALDDVQLGLDWLRHAKRTEGAPLVVFGQSLGASMVASVLGEK
GNAGAADCVILEAAFASYRDITSDVMKRSWLLWPLRWMVVPAMPDRELDPEVRVAGIKPTPLLVMHSVDDPVIPYAHGER
LYAAAQQPKTFQKLRGGHTESSRDPAVQQRLVDFMQDNNCAAKVAEVEQPVAPSDDESPPELFVPLPAPDKGYRF

Sequences:

>Translated_315_residues
MAMVLRLSTALLLSLLLVGCSKLFFYPMSAWVQNPENQGLEYEDIVLIHPRGMRIHGWWLPAANDAPARGTVYFLHGNAQ
NISTHLANVQWLPAQGYNVFLLDYRGYGLSEGKPRLPEALDDVQLGLDWLRHAKRTEGAPLVVFGQSLGASMVASVLGEK
GNAGAADCVILEAAFASYRDITSDVMKRSWLLWPLRWMVVPAMPDRELDPEVRVAGIKPTPLLVMHSVDDPVIPYAHGER
LYAAAQQPKTFQKLRGGHTESSRDPAVQQRLVDFMQDNNCAAKVAEVEQPVAPSDDESPPELFVPLPAPDKGYRF
>Mature_314_residues
AMVLRLSTALLLSLLLVGCSKLFFYPMSAWVQNPENQGLEYEDIVLIHPRGMRIHGWWLPAANDAPARGTVYFLHGNAQN
ISTHLANVQWLPAQGYNVFLLDYRGYGLSEGKPRLPEALDDVQLGLDWLRHAKRTEGAPLVVFGQSLGASMVASVLGEKG
NAGAADCVILEAAFASYRDITSDVMKRSWLLWPLRWMVVPAMPDRELDPEVRVAGIKPTPLLVMHSVDDPVIPYAHGERL
YAAAQQPKTFQKLRGGHTESSRDPAVQQRLVDFMQDNNCAAKVAEVEQPVAPSDDESPPELFVPLPAPDKGYRF

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the serine esterase family [H]

Homologues:

Organism=Homo sapiens, GI32528310, Length=194, Percent_Identity=29.3814432989691, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI32451492, Length=194, Percent_Identity=29.3814432989691, Blast_Score=72, Evalue=7e-13,
Organism=Escherichia coli, GI226510965, Length=239, Percent_Identity=33.8912133891213, Blast_Score=139, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI17566318, Length=222, Percent_Identity=23.8738738738739, Blast_Score=72, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6324009, Length=256, Percent_Identity=27.34375, Blast_Score=72, Evalue=8e-14,
Organism=Drosophila melanogaster, GI281362521, Length=249, Percent_Identity=27.710843373494, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI281362519, Length=249, Percent_Identity=27.710843373494, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28571878, Length=249, Percent_Identity=27.710843373494, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI17137566, Length=182, Percent_Identity=25.2747252747253, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001375 [H]

Pfam domain/function: PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 34907; Mature: 34776

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMVLRLSTALLLSLLLVGCSKLFFYPMSAWVQNPENQGLEYEDIVLIHPRGMRIHGWWL
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEEEEC
PAANDAPARGTVYFLHGNAQNISTHLANVQWLPAQGYNVFLLDYRGYGLSEGKPRLPEAL
CCCCCCCCCCEEEEEECCCCHHHHHHCCEEEEECCCCEEEEEEECCCCCCCCCCCCHHHH
DDVQLGLDWLRHAKRTEGAPLVVFGQSLGASMVASVLGEKGNAGAADCVILEAAFASYRD
HHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
ITSDVMKRSWLLWPLRWMVVPAMPDRELDPEVRVAGIKPTPLLVMHSVDDPVIPYAHGER
HHHHHHHHHHHEEEEEEEEEECCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCE
LYAAAQQPKTFQKLRGGHTESSRDPAVQQRLVDFMQDNNCAAKVAEVEQPVAPSDDESPP
EEEHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC
ELFVPLPAPDKGYRF
CEEEECCCCCCCCCC
>Mature Secondary Structure 
AMVLRLSTALLLSLLLVGCSKLFFYPMSAWVQNPENQGLEYEDIVLIHPRGMRIHGWWL
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEEEEC
PAANDAPARGTVYFLHGNAQNISTHLANVQWLPAQGYNVFLLDYRGYGLSEGKPRLPEAL
CCCCCCCCCCEEEEEECCCCHHHHHHCCEEEEECCCCEEEEEEECCCCCCCCCCCCHHHH
DDVQLGLDWLRHAKRTEGAPLVVFGQSLGASMVASVLGEKGNAGAADCVILEAAFASYRD
HHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
ITSDVMKRSWLLWPLRWMVVPAMPDRELDPEVRVAGIKPTPLLVMHSVDDPVIPYAHGER
HHHHHHHHHHHEEEEEEEEEECCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCE
LYAAAQQPKTFQKLRGGHTESSRDPAVQQRLVDFMQDNNCAAKVAEVEQPVAPSDDESPP
EEEHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC
ELFVPLPAPDKGYRF
CEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]