| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is hisZ [H]
Identifier: 110835059
GI number: 110835059
Start: 2509564
End: 2510739
Strand: Reverse
Name: hisZ [H]
Synonym: ABO_2198
Alternate gene names: 110835059
Gene position: 2510739-2509564 (Counterclockwise)
Preceding gene: 110835060
Following gene: 110835058
Centisome position: 80.47
GC content: 60.29
Gene sequence:
>1176_bases ATGATGAATCAGGAAGAACAGTGGCTACTGCCCGACGGGGTAGAAGAGGTCCTCCCGGGTCGCGCCCGGGCCATCGAGCA GCTGCGTCGGCAGACGCTGGATCTGTATCAGCGTTGGGGTTACGAACTTGTTTTCCCGCCGTTGATTGAGTTTATGGAAT CCTTGCTGAACGGCGGTGGCCGTGATCTGGAGAGGGAAACCTTCAAGATTACCGACCAGCTCACCGGGCGCCTGATGGGT GTTCGTGCGGATATTACCCCGCAAGTGGCGCGTATGGATGCCCATAGCTTGCGCCGTAACGCACCTTCTCGTCTTTGTTA CTGCTCCAGCGCCCTGCGCACCCGGCCGGTGGTCGCCGGTGGCACGCGCCTGCCCTATCAGTTGGGCGTAGAGCTATTTG GTCACGCCGGTTCAGACAGTGATCTCGAGGTGATTTCCTTGCTGCTGGAAACGCTGGCATTGTCAGGCGTCGAGCAACAG GTGGTACTGGATTTGGGCCACGTGGGTTTGTTCCGTGGTCTGCTCGAGGGCTGTGATTTGAGCGAAACTGAGCAGAACCA ATTGGAAGATATCTATGTGCGCAAAGCGCGGGTAGAGCTGGATTCTTTTATTGCCAGCCATGATTTGCCTGCGCCTGCGG CCAAGGCCTTGGCCGCCTTGCCTTGGTTAGCAGGTGGCGTGGAGGTGCTCAATGAGGCCCGTGCGTTATTGTCCCACTTC TCTGGCGCCCTAGCGGCATTGGATGAGCTGGCGGTGCTGGCCGATGTGCTCGGCGCTCGAGGGGTGCGGCTGCACCTGGA CTTGGGTGAGCTGCGTGGTTATCACTACCACACCGGTTGCGTGTTTGCGGCGTACTTGCCCGGTGAGAGCGAGCCCGTGG CCAAGGGCGGTCGCTACGATCACATTGGTGAAGTATTTGGTCGGGCCCGCCCGGCCACCGGCTTCAGTGCGGATTTGAAG ATGCTGGCTGAGCGTGCGCAATCTGCCGCGCTTACCGGTATTCTGGCTGAAGGGTCGCTGCAGGACGCCGCGTTCGCGAC TAGGGTTGCGGCTCTTCGTGAGCAGGGCGAGCGTGTGGTGCTGGCCCTTCCCGGTGCAGATAATGATCCGGCTGAACTAG GGTGCCAGCGTCGTCTGGTTGCTCAGGCCGATGGTTGGGTTGTGACCGACCTCTAA
Upstream 100 bases:
>100_bases GGCCCTTCAGGTGGCGCGTCTGGATAGTCGCCTGCTGCGAATTATAGGGCTGGCACTCATGGTATTGGGTGCGGGCTTGT TATTACTGATGCGGTCGTAA
Downstream 100 bases:
>100_bases AACCGAATTTCTTTTTTCCTGAATAGATGGCAGCAAGCAATCATGGGTAAGAACGTAGTCATTCTCGGCACCCAGTGGGG TGATGAAGGCAAAGGCAAAA
Product: ATP phosphoribosyl transferase regulatory subunit
Products: AMP; diphosphate +L-histidyl-tRNAHis [C]
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MMNQEEQWLLPDGVEEVLPGRARAIEQLRRQTLDLYQRWGYELVFPPLIEFMESLLNGGGRDLERETFKITDQLTGRLMG VRADITPQVARMDAHSLRRNAPSRLCYCSSALRTRPVVAGGTRLPYQLGVELFGHAGSDSDLEVISLLLETLALSGVEQQ VVLDLGHVGLFRGLLEGCDLSETEQNQLEDIYVRKARVELDSFIASHDLPAPAAKALAALPWLAGGVEVLNEARALLSHF SGALAALDELAVLADVLGARGVRLHLDLGELRGYHYHTGCVFAAYLPGESEPVAKGGRYDHIGEVFGRARPATGFSADLK MLAERAQSAALTGILAEGSLQDAAFATRVAALREQGERVVLALPGADNDPAELGCQRRLVAQADGWVVTDL
Sequences:
>Translated_391_residues MMNQEEQWLLPDGVEEVLPGRARAIEQLRRQTLDLYQRWGYELVFPPLIEFMESLLNGGGRDLERETFKITDQLTGRLMG VRADITPQVARMDAHSLRRNAPSRLCYCSSALRTRPVVAGGTRLPYQLGVELFGHAGSDSDLEVISLLLETLALSGVEQQ VVLDLGHVGLFRGLLEGCDLSETEQNQLEDIYVRKARVELDSFIASHDLPAPAAKALAALPWLAGGVEVLNEARALLSHF SGALAALDELAVLADVLGARGVRLHLDLGELRGYHYHTGCVFAAYLPGESEPVAKGGRYDHIGEVFGRARPATGFSADLK MLAERAQSAALTGILAEGSLQDAAFATRVAALREQGERVVLALPGADNDPAELGCQRRLVAQADGWVVTDL >Mature_391_residues MMNQEEQWLLPDGVEEVLPGRARAIEQLRRQTLDLYQRWGYELVFPPLIEFMESLLNGGGRDLERETFKITDQLTGRLMG VRADITPQVARMDAHSLRRNAPSRLCYCSSALRTRPVVAGGTRLPYQLGVELFGHAGSDSDLEVISLLLETLALSGVEQQ VVLDLGHVGLFRGLLEGCDLSETEQNQLEDIYVRKARVELDSFIASHDLPAPAAKALAALPWLAGGVEVLNEARALLSHF SGALAALDELAVLADVLGARGVRLHLDLGELRGYHYHTGCVFAAYLPGESEPVAKGGRYDHIGEVFGRARPATGFSADLK MLAERAQSAALTGILAEGSLQDAAFATRVAALREQGERVVLALPGADNDPAELGCQRRLVAQADGWVVTDL
Specific function: Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine [H]
COG id: COG3705
COG function: function code E; ATP phosphoribosyltransferase involved in histidine biosynthesis
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family. HisZ subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788861, Length=326, Percent_Identity=26.0736196319018, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004517 - InterPro: IPR004516 [H]
Pfam domain/function: NA
EC number: 6.1.1.21 [C]
Molecular weight: Translated: 42452; Mature: 42452
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNQEEQWLLPDGVEEVLPGRARAIEQLRRQTLDLYQRWGYELVFPPLIEFMESLLNGGG CCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCC RDLERETFKITDQLTGRLMGVRADITPQVARMDAHSLRRNAPSRLCYCSSALRTRPVVAG CCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEC GTRLPYQLGVELFGHAGSDSDLEVISLLLETLALSGVEQQVVLDLGHVGLFRGLLEGCDL CCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC SETEQNQLEDIYVRKARVELDSFIASHDLPAPAAKALAALPWLAGGVEVLNEARALLSHF CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGALAALDELAVLADVLGARGVRLHLDLGELRGYHYHTGCVFAAYLPGESEPVAKGGRYD HHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCEEECCEEEEEECCCCCCCCCCCCCCH HIGEVFGRARPATGFSADLKMLAERAQSAALTGILAEGSLQDAAFATRVAALREQGERVV HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEE LALPGADNDPAELGCQRRLVAQADGWVVTDL EECCCCCCCHHHHHHHHHHHHCCCCEEEECC >Mature Secondary Structure MMNQEEQWLLPDGVEEVLPGRARAIEQLRRQTLDLYQRWGYELVFPPLIEFMESLLNGGG CCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCC RDLERETFKITDQLTGRLMGVRADITPQVARMDAHSLRRNAPSRLCYCSSALRTRPVVAG CCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEC GTRLPYQLGVELFGHAGSDSDLEVISLLLETLALSGVEQQVVLDLGHVGLFRGLLEGCDL CCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC SETEQNQLEDIYVRKARVELDSFIASHDLPAPAAKALAALPWLAGGVEVLNEARALLSHF CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGALAALDELAVLADVLGARGVRLHLDLGELRGYHYHTGCVFAAYLPGESEPVAKGGRYD HHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCEEECCEEEEEECCCCCCCCCCCCCCH HIGEVFGRARPATGFSADLKMLAERAQSAALTGILAEGSLQDAAFATRVAALREQGERVV HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEE LALPGADNDPAELGCQRRLVAQADGWVVTDL EECCCCCCCHHHHHHHHHHHHCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Mg2+ [C]
Kcat value (1/min): 8520 [C]
Specific activity: 121.8
Km value (mM): 0.06 {His}} 0.046 {His}} 0.03 {His}} 0.02 {His}} 0.017 {His}} 0.011 {His}} 0.008 {His}} 0.0014 {tRNAHis}} 0.00056 {tRNAHis}} 0.0016 {U73tRNAHisGUG}} 0.00031 {U73tRNAHisGUG}} 0.89 {ATP}} 0.74 {ATP}} 0.655 {ATP}} 0.5
Substrates: ATP; @HIST01.txt*L-histidine!; tRNAHis [C]
Specific reaction: ATP + @HIST01.txt*L-histidine! + tRNAHis = AMP + diphosphate +L-histidyl-tRNAHis [C]
General reaction: Aminoacylation; Esterification [C]
Inhibitor: 1, 2, 4-Triazole-3-alanine; D-Histidine; Diphosphate; L-Histidinol; Mg2+; N-Acetyl histidine; NEM; p-Chloromercuribenzoate [C]
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA