Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is priB

Identifier: 110835051

GI number: 110835051

Start: 2499529

End: 2499837

Strand: Reverse

Name: priB

Synonym: ABO_2190

Alternate gene names: NA

Gene position: 2499837-2499529 (Counterclockwise)

Preceding gene: 110835052

Following gene: 110835050

Centisome position: 80.12

GC content: 57.93

Gene sequence:

>309_bases
TTGGAAAGCAACCACTGCGAACTCACTGGTGTGATCGTCACCTTAGAAAAGGTGGCCCTGACTCCAGCCGGAGTGCCCCG
CCAGAGAATCTGGTTGGAGCATCGCTCTCGGCAACTGGAAGACGGACATCCCCGTGAAGTCCAGGCCCGCATTGCCGTTA
TTCTGGCAGGTGGGATGACCCAGCAGGCCGCAGGCCTGAAAGAGGGTCAGCGAATCAAGGTAATCGGATGCCTCAGCCGT
GCCGGTTACAAGGGAGACGCCCGGGACCGTTTGCAATTGCTTGCCCAAACGCTGCAAAGCCTTAACTAA

Upstream 100 bases:

>100_bases
ATGCCGTAATCCGTCACCTCGTAATTCGTCGCGACAACGCTATTACTGAGCCGTCGCCGCTGGCGAAGCATGACGAGAAG
GAAGGGGCTGCCAGCTAACT

Downstream 100 bases:

>100_bases
GGATTCGACAGGAGATTATCCAATGGCCCGTTTTTATCGCCGCCGCAAGTTCTGCCGCTTTACTGCGGAAGGTGTTGAGT
ACATCGATTACAAAGATCTC

Product: primosomal replication protein N

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MESNHCELTGVIVTLEKVALTPAGVPRQRIWLEHRSRQLEDGHPREVQARIAVILAGGMTQQAAGLKEGQRIKVIGCLSR
AGYKGDARDRLQLLAQTLQSLN

Sequences:

>Translated_102_residues
MESNHCELTGVIVTLEKVALTPAGVPRQRIWLEHRSRQLEDGHPREVQARIAVILAGGMTQQAAGLKEGQRIKVIGCLSR
AGYKGDARDRLQLLAQTLQSLN
>Mature_102_residues
MESNHCELTGVIVTLEKVALTPAGVPRQRIWLEHRSRQLEDGHPREVQARIAVILAGGMTQQAAGLKEGQRIKVIGCLSR
AGYKGDARDRLQLLAQTLQSLN

Specific function: Unknown

COG id: COG2965

COG function: function code L; Primosomal replication protein N

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11223; Mature: 11223

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESNHCELTGVIVTLEKVALTPAGVPRQRIWLEHRSRQLEDGHPREVQARIAVILAGGMT
CCCCCCEEEEHEEEHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHEEEEEEECCCC
QQAAGLKEGQRIKVIGCLSRAGYKGDARDRLQLLAQTLQSLN
HHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MESNHCELTGVIVTLEKVALTPAGVPRQRIWLEHRSRQLEDGHPREVQARIAVILAGGMT
CCCCCCEEEEHEEEHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHEEEEEEECCCC
QQAAGLKEGQRIKVIGCLSRAGYKGDARDRLQLLAQTLQSLN
HHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA