| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834982
Identifier: 110834982
GI number: 110834982
Start: 2426651
End: 2427085
Strand: Reverse
Name: 110834982
Synonym: ABO_2121
Alternate gene names: NA
Gene position: 2427085-2426651 (Counterclockwise)
Preceding gene: 110834983
Following gene: 110834980
Centisome position: 77.79
GC content: 47.36
Gene sequence:
>435_bases ATGGCTGCGCTTATGAAGCGTTTGTCGTTGTTTCGCTATGGCTATGGAAAACGCTATTTAGCAAAAACACCCCTGTTCTT TCTTTCGCCGGTTCGGCTCATGGAAGTGATGGAGAAAATTGAGATGTTGCGTGGCGTCGAGAGCGATCTTGCTGCGGCAG CGGTAGGCGATCGCGTTTTTTTATTCAGCCTTGAAGATGAAGAGCAGATGTCTTTCATTTTGGCAGAAGCTGGAAAAAGA CCCCTGGATAACAAAGATCTTTCTGTGCTTTCCCCGCTGGGCGCGGCTTTGCTTGGGTCCTTGCCTGGCGCGGTGGTCAA TGTGGATTTTCTCGGTCATCGACACCGATATCTTTTGTTGAAAGTAAAAAAACCAGCAGGAAGTAGAATTTTTAACGAGA AGAAGGAGGGTTCTGTTTTGCACGATTTGCCGTAA
Upstream 100 bases:
>100_bases ACCTTTCCGGTTTAAGCCGGGCGGAACCCGTCCGGCTTATTTTCCGTTTTCGACATCGTTCGATACCCCCCTCTTTTCTT ATTAATTTGGTGAACGGTTT
Downstream 100 bases:
>100_bases AGAATACGAAAAAGTATGCAGTCAAATTGAAGGAAAAACGTTATGAGTAAAGAAAAAACGAAGAAAAAACCGCAAAAAAC TCTAAAAGAGAAACGACGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MAALMKRLSLFRYGYGKRYLAKTPLFFLSPVRLMEVMEKIEMLRGVESDLAAAAVGDRVFLFSLEDEEQMSFILAEAGKR PLDNKDLSVLSPLGAALLGSLPGAVVNVDFLGHRHRYLLLKVKKPAGSRIFNEKKEGSVLHDLP
Sequences:
>Translated_144_residues MAALMKRLSLFRYGYGKRYLAKTPLFFLSPVRLMEVMEKIEMLRGVESDLAAAAVGDRVFLFSLEDEEQMSFILAEAGKR PLDNKDLSVLSPLGAALLGSLPGAVVNVDFLGHRHRYLLLKVKKPAGSRIFNEKKEGSVLHDLP >Mature_143_residues AALMKRLSLFRYGYGKRYLAKTPLFFLSPVRLMEVMEKIEMLRGVESDLAAAAVGDRVFLFSLEDEEQMSFILAEAGKRP LDNKDLSVLSPLGAALLGSLPGAVVNVDFLGHRHRYLLLKVKKPAGSRIFNEKKEGSVLHDLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16048; Mature: 15917
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALMKRLSLFRYGYGKRYLAKTPLFFLSPVRLMEVMEKIEMLRGVESDLAAAAVGDRVF CHHHHHHHHHHHHCCCCCHHHHCCHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEE LFSLEDEEQMSFILAEAGKRPLDNKDLSVLSPLGAALLGSLPGAVVNVDFLGHRHRYLLL EEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEE KVKKPAGSRIFNEKKEGSVLHDLP EEECCCCCHHHCCCCCCCCCCCCC >Mature Secondary Structure AALMKRLSLFRYGYGKRYLAKTPLFFLSPVRLMEVMEKIEMLRGVESDLAAAAVGDRVF HHHHHHHHHHHHCCCCCHHHHCCHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEE LFSLEDEEQMSFILAEAGKRPLDNKDLSVLSPLGAALLGSLPGAVVNVDFLGHRHRYLLL EEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEE KVKKPAGSRIFNEKKEGSVLHDLP EEECCCCCHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA