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The map label for this gene is ycfF [C]

Identifier: 110834975

GI number: 110834975

Start: 2419912

End: 2420250

Strand: Reverse

Name: ycfF [C]

Synonym: ABO_2114

Alternate gene names: 110834975

Gene position: 2420250-2419912 (Counterclockwise)

Preceding gene: 110834977

Following gene: 110834974

Centisome position: 77.57

GC content: 53.69

Gene sequence:

>339_bases
ATGGCTGAAACCCTGTTCTCCAAGATCATCGACCGTGAAATTCCTGCTGATATCATCTTTGAAGACGACCAGTGCCTGGC
TTTCCGGGATATCAACCCGCAGGCGCCTACGCATTTTCTGGTGATTCCCAAGAAGCCGATTGCTAAGTTGTCTGATGCTG
AAGAAGCCGATCAGGCGCTGCTTGGGCATTTACTACTGGTGGCCAGCCAGGTGGCCAAACAAGAAGGGCTGGAGGATTTT
CGCTTGAACGTGAATAACGGCGCCGGCGCCAGCCAAACTGTATTTCACCTGCATGTGCATGTGCTGGGTGGGCGTTCGTT
TAGTTGGCCGCCAGGCTGA

Upstream 100 bases:

>100_bases
CGTAGCTGTGAACCGGGGCACACCCGATACACAGTGAAATGCACATCATGAGTACCAATGCCCTGCTTTGGTCTAGCGTT
ACCCAAGGAGTGAAAAGACA

Downstream 100 bases:

>100_bases
TCTCCTGGTCGCGTGTAGGTCGACCAAGACCGTTTAATTCCCTTACCGGAGTACCTAAAATGGCGCGCCGTTTGCAGCGC
AGTGCGGTGAACAAGGTGTG

Product: HIT family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MAETLFSKIIDREIPADIIFEDDQCLAFRDINPQAPTHFLVIPKKPIAKLSDAEEADQALLGHLLLVASQVAKQEGLEDF
RLNVNNGAGASQTVFHLHVHVLGGRSFSWPPG

Sequences:

>Translated_112_residues
MAETLFSKIIDREIPADIIFEDDQCLAFRDINPQAPTHFLVIPKKPIAKLSDAEEADQALLGHLLLVASQVAKQEGLEDF
RLNVNNGAGASQTVFHLHVHVLGGRSFSWPPG
>Mature_111_residues
AETLFSKIIDREIPADIIFEDDQCLAFRDINPQAPTHFLVIPKKPIAKLSDAEEADQALLGHLLLVASQVAKQEGLEDFR
LNVNNGAGASQTVFHLHVHVLGGRSFSWPPG

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI14211923, Length=112, Percent_Identity=65.1785714285714, Blast_Score=162, Evalue=4e-41,
Organism=Homo sapiens, GI4885413, Length=112, Percent_Identity=58.9285714285714, Blast_Score=145, Evalue=6e-36,
Organism=Escherichia coli, GI1787346, Length=105, Percent_Identity=48.5714285714286, Blast_Score=102, Evalue=8e-24,
Organism=Caenorhabditis elegans, GI17506713, Length=111, Percent_Identity=60.3603603603604, Blast_Score=144, Evalue=1e-35,
Organism=Saccharomyces cerevisiae, GI6320078, Length=115, Percent_Identity=35.6521739130435, Blast_Score=62, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28574010, Length=111, Percent_Identity=59.4594594594595, Blast_Score=146, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24581222, Length=111, Percent_Identity=59.4594594594595, Blast_Score=146, Evalue=3e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 12298; Mature: 12167

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAETLFSKIIDREIPADIIFEDDQCLAFRDINPQAPTHFLVIPKKPIAKLSDAEEADQAL
CHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCCCEEEEEECCCCCHHCCCHHHHHHHH
LGHLLLVASQVAKQEGLEDFRLNVNNGAGASQTVFHLHVHVLGGRSFSWPPG
HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
AETLFSKIIDREIPADIIFEDDQCLAFRDINPQAPTHFLVIPKKPIAKLSDAEEADQAL
HHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCCCEEEEEECCCCCHHCCCHHHHHHHH
LGHLLLVASQVAKQEGLEDFRLNVNNGAGASQTVFHLHVHVLGGRSFSWPPG
HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]