| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834971
Identifier: 110834971
GI number: 110834971
Start: 2416533
End: 2416973
Strand: Reverse
Name: 110834971
Synonym: ABO_2110
Alternate gene names: NA
Gene position: 2416973-2416533 (Counterclockwise)
Preceding gene: 110834974
Following gene: 110834967
Centisome position: 77.46
GC content: 52.61
Gene sequence:
>441_bases ATGACCATAGCAGTGTCGTTGCAACGGCGAGTGAATGTAGCCCTTTTTTCTTTGGTGTTAGTCGCTAGCTCTTCACTGGC TTCACGTTGTGAAGCGCAAGACGTGCCATCGGTCCCGATGATGGAATTGACAGTGACGGCCTCGGCCTATAATTCACTGT ATGGGCAGGGGGCGGGAAGCGACCATGCGTTGGCCGCCTGGGGCGATCGGTTAAAACCGTGTATGCAAGTCATTGCTGTG TCCCGTGATTTGATTTCAATGGGGCTTACGCACAATGTGGAAGTTACCATCGAGGGCTTGCCTGGTGTTTGGCAAGTGAA GGATAAGATGCATCGCCGCTGGAAACGCAAAATTGATATTTATATGGGGGAGGACTTGCAGGCTGCACGTGAATGGGGGC GCCGTAAAGTCAAAATCCGTTTCCCTCGGCCGAAGGAGTAG
Upstream 100 bases:
>100_bases GTGGTTTTTCAGAGTAAAAGCCACACGCAGCCATCAGTGCCCCAATAAAAAGAATAAGAGAAAAGCGAATAACAGGATGA GCAGAGCGGAGAGTCATGCC
Downstream 100 bases:
>100_bases TTGCAAGCTGAAAATTACAGTAGGTATAACTGGTTTCAGCTTTCAATGCACAGGAGCCGAGGCCAGACCTTGGCCATGGC TCCTTTATTTTTAATCCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MTIAVSLQRRVNVALFSLVLVASSSLASRCEAQDVPSVPMMELTVTASAYNSLYGQGAGSDHALAAWGDRLKPCMQVIAV SRDLISMGLTHNVEVTIEGLPGVWQVKDKMHRRWKRKIDIYMGEDLQAAREWGRRKVKIRFPRPKE
Sequences:
>Translated_146_residues MTIAVSLQRRVNVALFSLVLVASSSLASRCEAQDVPSVPMMELTVTASAYNSLYGQGAGSDHALAAWGDRLKPCMQVIAV SRDLISMGLTHNVEVTIEGLPGVWQVKDKMHRRWKRKIDIYMGEDLQAAREWGRRKVKIRFPRPKE >Mature_145_residues TIAVSLQRRVNVALFSLVLVASSSLASRCEAQDVPSVPMMELTVTASAYNSLYGQGAGSDHALAAWGDRLKPCMQVIAVS RDLISMGLTHNVEVTIEGLPGVWQVKDKMHRRWKRKIDIYMGEDLQAAREWGRRKVKIRFPRPKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16351; Mature: 16220
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIAVSLQRRVNVALFSLVLVASSSLASRCEAQDVPSVPMMELTVTASAYNSLYGQGAGS CEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCC DHALAAWGDRLKPCMQVIAVSRDLISMGLTHNVEVTIEGLPGVWQVKDKMHRRWKRKIDI CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHEEE YMGEDLQAAREWGRRKVKIRFPRPKE EECCCHHHHHHCCCEEEEEECCCCCC >Mature Secondary Structure TIAVSLQRRVNVALFSLVLVASSSLASRCEAQDVPSVPMMELTVTASAYNSLYGQGAGS EEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCC DHALAAWGDRLKPCMQVIAVSRDLISMGLTHNVEVTIEGLPGVWQVKDKMHRRWKRKIDI CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHEEE YMGEDLQAAREWGRRKVKIRFPRPKE EECCCHHHHHHCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA