BacMap

Definition	Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession	NC_008260
Length	3,120,143

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The map label for this gene is dbpA [H]

Identifier: 110834947

GI number: 110834947

Start: 2375631

End: 2377010

Strand: Reverse

Name: dbpA [H]

Synonym: ABO_2086

Alternate gene names: 110834947

Gene position: 2377010-2375631 (Counterclockwise)

Preceding gene: 110834949

Following gene: 110834946

Centisome position: 76.18

GC content: 56.88

Gene sequence:

>1380_bases
GTGACCGATTCTTCTTTTGCCTCCCTGCCGTTGACCCCAGAAATGCTCGCTAACCTGGACGCGCTGGGCTACGTCACCAT
GACTCCCGTACAAGCGCAAAGCCTGCCGTTATTGCTTAAAGGGCACGATGTGATTGCCCAGGCCAGTACCGGTAGCGGCA
AGACGGCAGCCTTTGGGCTTGGTTTGCTGCACCCTTTGAACCCGCGCTATTACGGTTGCCAGGCGTTGGTGCTGTGCCCA
ACCCGGGAGTTGGCAGATCAAGTGGCCGTGGAAATTCGCCGGTTGGCCCGTGGTCCCGGCAATATCAAAGTACTCACCCT
GTGTGGTGGGCAACCCATCGGCCCGCAGATCGGCTCACTGGAGCACGGTGCGCAGATTGTGGTTGGCACACCGGGGCGCG
TTCTAAAACACTTGAGTAAGGGGACGCTGAGCTTGGACGGGCTGAATACGCTGGTATTGGATGAAGCCGATCGCATGCTC
GATATGGGCTTTTACGACAGCATTGCGGAGGTGATTCGGCAGACGCCGCCACGCCGTCAAACCCTGCTGTTTTCCGCCAC
CTACCCGCCGGGAATCAAGCAGCTGGCAGAAACTTTCATGAGTAATCCCCAGCATGTAGAAGTGGAAACCCTGCACGATA
ATAGCCAGATCGAGCAGCGCTATTATGAAGTGGAGCCGTTCCAGCGCGAAGAGGCAGTGGCCAGCGCCATTGCCTGTTTC
CGTCCAGTATCCTGCGTGGTGTTCTGTGTGACCAAGCAGCAATGCCAGGATGTAGTGAATCAGCTTTGTCGTCAGGGGCT
GTCAGCCATGGTGCTCAACAGTGACCTGGAGCAGCGTGAGCGCGATGAGGTGCTCACGTTGTTTGCCAACCGCAGCTTAT
CGGTGCTGGTGGCCACGGATGTGGCGGCCCGGGGGCTGGATATTGATAACCTGGATATGGTCATCAATGCGGAGTTGTCC
CACGAGCCGCAAACCCATATCCATCGTGTTGGCCGCACCGGCCGTGCCGGCGAAAAAGGGCTGGCTATTAATCTGGTAGC
CCCCCGTGAATCCCGGCGCGCTATAGCTATTGAACAGTTGCAGGGCGCGCCTTTGAATTGGCATCCGCTCAATAGCCTTA
AGCCTCGAGAGGGGGAGCCAATGCAGCCGCCTACCATCACCTTATGTATCGGTGCAGGCCGCAAAGACAAGCTGCGCCCC
GGTGATATCCTCGGTGCGCTTACCGGTGATGCTGGCATTGCGGGTAATCAGGTGGGAAAAATTACCGTCACGGATTATCA
GGCCTATGTGGCTATCGATCGTGAGAGTGCGGACTTGGCTCTCGAACGATTACTGAAAGGCAAAATCAAAGGAAAAAACC
GGCGGGTGAAAAAGCTTTAA

Upstream 100 bases:

>100_bases
AATTTGATCCTCATTAGAATGCCACAACTGTTACACTGGCCACACTGCTTGCTCTGTATCTTGCTGTTTTTTCTTGCCAC
CTTTGCCACAGGCTACCTCC

Downstream 100 bases:

>100_bases
TTACCAGGCTGAAAAATGGTGCGCTGTGGAACGCGGTGTTGCCGGCGAAGGCTTGCGTCCTTCCACTGGCGCGACCTCAG
GGGGCTTTACCTCCTGGGTG

Product: ATP-dependent RNA helicase DbpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 458

Protein sequence:

>459_residues
MTDSSFASLPLTPEMLANLDALGYVTMTPVQAQSLPLLLKGHDVIAQASTGSGKTAAFGLGLLHPLNPRYYGCQALVLCP
TRELADQVAVEIRRLARGPGNIKVLTLCGGQPIGPQIGSLEHGAQIVVGTPGRVLKHLSKGTLSLDGLNTLVLDEADRML
DMGFYDSIAEVIRQTPPRRQTLLFSATYPPGIKQLAETFMSNPQHVEVETLHDNSQIEQRYYEVEPFQREEAVASAIACF
RPVSCVVFCVTKQQCQDVVNQLCRQGLSAMVLNSDLEQRERDEVLTLFANRSLSVLVATDVAARGLDIDNLDMVINAELS
HEPQTHIHRVGRTGRAGEKGLAINLVAPRESRRAIAIEQLQGAPLNWHPLNSLKPREGEPMQPPTITLCIGAGRKDKLRP
GDILGALTGDAGIAGNQVGKITVTDYQAYVAIDRESADLALERLLKGKIKGKNRRVKKL

Sequences:

>Translated_459_residues
MTDSSFASLPLTPEMLANLDALGYVTMTPVQAQSLPLLLKGHDVIAQASTGSGKTAAFGLGLLHPLNPRYYGCQALVLCP
TRELADQVAVEIRRLARGPGNIKVLTLCGGQPIGPQIGSLEHGAQIVVGTPGRVLKHLSKGTLSLDGLNTLVLDEADRML
DMGFYDSIAEVIRQTPPRRQTLLFSATYPPGIKQLAETFMSNPQHVEVETLHDNSQIEQRYYEVEPFQREEAVASAIACF
RPVSCVVFCVTKQQCQDVVNQLCRQGLSAMVLNSDLEQRERDEVLTLFANRSLSVLVATDVAARGLDIDNLDMVINAELS
HEPQTHIHRVGRTGRAGEKGLAINLVAPRESRRAIAIEQLQGAPLNWHPLNSLKPREGEPMQPPTITLCIGAGRKDKLRP
GDILGALTGDAGIAGNQVGKITVTDYQAYVAIDRESADLALERLLKGKIKGKNRRVKKL
>Mature_458_residues
TDSSFASLPLTPEMLANLDALGYVTMTPVQAQSLPLLLKGHDVIAQASTGSGKTAAFGLGLLHPLNPRYYGCQALVLCPT
RELADQVAVEIRRLARGPGNIKVLTLCGGQPIGPQIGSLEHGAQIVVGTPGRVLKHLSKGTLSLDGLNTLVLDEADRMLD
MGFYDSIAEVIRQTPPRRQTLLFSATYPPGIKQLAETFMSNPQHVEVETLHDNSQIEQRYYEVEPFQREEAVASAIACFR
PVSCVVFCVTKQQCQDVVNQLCRQGLSAMVLNSDLEQRERDEVLTLFANRSLSVLVATDVAARGLDIDNLDMVINAELSH
EPQTHIHRVGRTGRAGEKGLAINLVAPRESRRAIAIEQLQGAPLNWHPLNSLKPREGEPMQPPTITLCIGAGRKDKLRPG
DILGALTGDAGIAGNQVGKITVTDYQAYVAIDRESADLALERLLKGKIKGKNRRVKKL

Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI45446747, Length=370, Percent_Identity=37.2972972972973, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI45446743, Length=370, Percent_Identity=37.2972972972973, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI148613856, Length=350, Percent_Identity=38, Blast_Score=227, Evalue=2e-59,
Organism=Homo sapiens, GI38201710, Length=350, Percent_Identity=38, Blast_Score=227, Evalue=2e-59,
Organism=Homo sapiens, GI4758138, Length=334, Percent_Identity=39.5209580838323, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI7661920, Length=376, Percent_Identity=34.3085106382979, Blast_Score=221, Evalue=2e-57,
Organism=Homo sapiens, GI50659095, Length=416, Percent_Identity=33.4134615384615, Blast_Score=219, Evalue=3e-57,
Organism=Homo sapiens, GI262118318, Length=357, Percent_Identity=36.6946778711485, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI41327773, Length=360, Percent_Identity=35, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI216548263, Length=357, Percent_Identity=36.6946778711485, Blast_Score=210, Evalue=3e-54,
Organism=Homo sapiens, GI262231852, Length=357, Percent_Identity=36.6946778711485, Blast_Score=209, Evalue=3e-54,
Organism=Homo sapiens, GI13518015, Length=357, Percent_Identity=36.6946778711485, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI301171467, Length=369, Percent_Identity=36.0433604336043, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI301171475, Length=369, Percent_Identity=36.0433604336043, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI87196351, Length=369, Percent_Identity=36.0433604336043, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI13129006, Length=379, Percent_Identity=33.7730870712401, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI164664518, Length=368, Percent_Identity=30.1630434782609, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI31542656, Length=365, Percent_Identity=36.986301369863, Blast_Score=205, Evalue=8e-53,
Organism=Homo sapiens, GI169881239, Length=366, Percent_Identity=35.792349726776, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI13514809, Length=366, Percent_Identity=35.792349726776, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI224593278, Length=370, Percent_Identity=36.7567567567568, Blast_Score=203, Evalue=3e-52,
Organism=Homo sapiens, GI20149629, Length=368, Percent_Identity=34.7826086956522, Blast_Score=202, Evalue=6e-52,
Organism=Homo sapiens, GI41327771, Length=384, Percent_Identity=32.2916666666667, Blast_Score=195, Evalue=9e-50,
Organism=Homo sapiens, GI13514831, Length=361, Percent_Identity=34.9030470914127, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI4758112, Length=351, Percent_Identity=32.1937321937322, Blast_Score=190, Evalue=3e-48,
Organism=Homo sapiens, GI18375623, Length=351, Percent_Identity=32.1937321937322, Blast_Score=190, Evalue=3e-48,
Organism=Homo sapiens, GI21040371, Length=351, Percent_Identity=31.9088319088319, Blast_Score=189, Evalue=3e-48,
Organism=Homo sapiens, GI222352149, Length=351, Percent_Identity=33.048433048433, Blast_Score=189, Evalue=7e-48,
Organism=Homo sapiens, GI21071032, Length=358, Percent_Identity=33.5195530726257, Blast_Score=188, Evalue=1e-47,
Organism=Homo sapiens, GI164419743, Length=354, Percent_Identity=35.0282485875706, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI51094101, Length=354, Percent_Identity=35.0282485875706, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI55749865, Length=351, Percent_Identity=30.4843304843305, Blast_Score=182, Evalue=5e-46,
Organism=Homo sapiens, GI83700235, Length=375, Percent_Identity=34.1333333333333, Blast_Score=181, Evalue=9e-46,
Organism=Homo sapiens, GI188035877, Length=349, Percent_Identity=33.810888252149, Blast_Score=181, Evalue=9e-46,
Organism=Homo sapiens, GI4503529, Length=373, Percent_Identity=32.9758713136729, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI41327776, Length=367, Percent_Identity=32.425068119891, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI6005743, Length=364, Percent_Identity=31.3186813186813, Blast_Score=169, Evalue=7e-42,
Organism=Homo sapiens, GI8922886, Length=364, Percent_Identity=31.043956043956, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI38327634, Length=364, Percent_Identity=33.5164835164835, Blast_Score=165, Evalue=8e-41,
Organism=Homo sapiens, GI41327779, Length=409, Percent_Identity=29.5843520782396, Blast_Score=165, Evalue=1e-40,
Organism=Homo sapiens, GI164419732, Length=345, Percent_Identity=32.1739130434783, Blast_Score=160, Evalue=2e-39,
Organism=Homo sapiens, GI62241022, Length=347, Percent_Identity=30.835734870317, Blast_Score=156, Evalue=3e-38,
Organism=Homo sapiens, GI38569503, Length=350, Percent_Identity=29.7142857142857, Blast_Score=150, Evalue=3e-36,
Organism=Homo sapiens, GI38569505, Length=351, Percent_Identity=29.6296296296296, Blast_Score=150, Evalue=3e-36,
Organism=Homo sapiens, GI62241024, Length=325, Percent_Identity=31.0769230769231, Blast_Score=149, Evalue=5e-36,
Organism=Homo sapiens, GI256223453, Length=351, Percent_Identity=29.3447293447293, Blast_Score=147, Evalue=2e-35,
Organism=Homo sapiens, GI9506931, Length=403, Percent_Identity=29.0322580645161, Blast_Score=146, Evalue=3e-35,
Organism=Homo sapiens, GI4826686, Length=338, Percent_Identity=31.0650887573964, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI17505907, Length=226, Percent_Identity=34.5132743362832, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI20336298, Length=225, Percent_Identity=34.6666666666667, Blast_Score=116, Evalue=5e-26,
Organism=Homo sapiens, GI256773275, Length=391, Percent_Identity=30.1790281329923, Blast_Score=115, Evalue=7e-26,
Organism=Homo sapiens, GI9966805, Length=321, Percent_Identity=29.9065420560748, Blast_Score=114, Evalue=3e-25,
Organism=Homo sapiens, GI154759257, Length=433, Percent_Identity=26.3279445727483, Blast_Score=97, Evalue=2e-20,
Organism=Escherichia coli, GI1787605, Length=459, Percent_Identity=53.1590413943355, Blast_Score=463, Evalue=1e-131,
Organism=Escherichia coli, GI87082221, Length=358, Percent_Identity=41.6201117318436, Blast_Score=276, Evalue=2e-75,
Organism=Escherichia coli, GI1787016, Length=363, Percent_Identity=40.495867768595, Blast_Score=247, Evalue=1e-66,
Organism=Escherichia coli, GI1790214, Length=385, Percent_Identity=33.7662337662338, Blast_Score=213, Evalue=2e-56,
Organism=Escherichia coli, GI1788930, Length=392, Percent_Identity=33.6734693877551, Blast_Score=188, Evalue=7e-49,
Organism=Caenorhabditis elegans, GI71995724, Length=377, Percent_Identity=34.2175066312997, Blast_Score=227, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI17507121, Length=377, Percent_Identity=34.2175066312997, Blast_Score=226, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI115533224, Length=337, Percent_Identity=37.9821958456973, Blast_Score=211, Evalue=5e-55,
Organism=Caenorhabditis elegans, GI71987143, Length=370, Percent_Identity=33.2432432432432, Blast_Score=211, Evalue=5e-55,
Organism=Caenorhabditis elegans, GI17555296, Length=373, Percent_Identity=34.5844504021448, Blast_Score=204, Evalue=6e-53,
Organism=Caenorhabditis elegans, GI86570094, Length=365, Percent_Identity=36.7123287671233, Blast_Score=203, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17510307, Length=364, Percent_Identity=37.9120879120879, Blast_Score=202, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI17510309, Length=364, Percent_Identity=37.9120879120879, Blast_Score=202, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI71995514, Length=364, Percent_Identity=37.9120879120879, Blast_Score=202, Evalue=4e-52,
Organism=Caenorhabditis elegans, GI71999646, Length=356, Percent_Identity=35.1123595505618, Blast_Score=199, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI71999644, Length=369, Percent_Identity=34.1463414634146, Blast_Score=198, Evalue=5e-51,
Organism=Caenorhabditis elegans, GI17510559, Length=380, Percent_Identity=35, Blast_Score=197, Evalue=8e-51,
Organism=Caenorhabditis elegans, GI115532548, Length=377, Percent_Identity=34.2175066312997, Blast_Score=195, Evalue=4e-50,
Organism=Caenorhabditis elegans, GI115532546, Length=377, Percent_Identity=34.2175066312997, Blast_Score=195, Evalue=4e-50,
Organism=Caenorhabditis elegans, GI17552642, Length=355, Percent_Identity=35.7746478873239, Blast_Score=194, Evalue=5e-50,
Organism=Caenorhabditis elegans, GI17507877, Length=371, Percent_Identity=35.3099730458221, Blast_Score=194, Evalue=6e-50,
Organism=Caenorhabditis elegans, GI17509811, Length=381, Percent_Identity=34.9081364829396, Blast_Score=194, Evalue=6e-50,
Organism=Caenorhabditis elegans, GI71995718, Length=379, Percent_Identity=36.1477572559367, Blast_Score=193, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI71982858, Length=351, Percent_Identity=31.6239316239316, Blast_Score=192, Evalue=4e-49,
Organism=Caenorhabditis elegans, GI17507879, Length=374, Percent_Identity=34.2245989304813, Blast_Score=187, Evalue=7e-48,
Organism=Caenorhabditis elegans, GI17505370, Length=365, Percent_Identity=33.972602739726, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI17552114, Length=357, Percent_Identity=29.4117647058824, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI17507945, Length=343, Percent_Identity=35.8600583090379, Blast_Score=185, Evalue=5e-47,
Organism=Caenorhabditis elegans, GI32565321, Length=383, Percent_Identity=31.8537859007833, Blast_Score=184, Evalue=6e-47,
Organism=Caenorhabditis elegans, GI193206561, Length=357, Percent_Identity=29.9719887955182, Blast_Score=181, Evalue=7e-46,
Organism=Caenorhabditis elegans, GI17507881, Length=376, Percent_Identity=31.3829787234043, Blast_Score=176, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI17537549, Length=342, Percent_Identity=31.5789473684211, Blast_Score=174, Evalue=7e-44,
Organism=Caenorhabditis elegans, GI193208216, Length=395, Percent_Identity=30.126582278481, Blast_Score=156, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI17536099, Length=381, Percent_Identity=30.9711286089239, Blast_Score=155, Evalue=4e-38,
Organism=Caenorhabditis elegans, GI17536101, Length=381, Percent_Identity=30.9711286089239, Blast_Score=155, Evalue=4e-38,
Organism=Caenorhabditis elegans, GI17536103, Length=381, Percent_Identity=30.9711286089239, Blast_Score=150, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI17553716, Length=347, Percent_Identity=27.6657060518732, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI17556951, Length=399, Percent_Identity=28.0701754385965, Blast_Score=133, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI25148203, Length=410, Percent_Identity=26.8292682926829, Blast_Score=130, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI17508543, Length=364, Percent_Identity=29.6703296703297, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17507641, Length=428, Percent_Identity=26.6355140186916, Blast_Score=125, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI25148291, Length=331, Percent_Identity=29.607250755287, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI71982862, Length=205, Percent_Identity=34.1463414634146, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI32564046, Length=406, Percent_Identity=26.6009852216749, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI71990816, Length=380, Percent_Identity=28.1578947368421, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI71997889, Length=395, Percent_Identity=28.3544303797468, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI25148205, Length=345, Percent_Identity=26.0869565217391, Blast_Score=102, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI71987152, Length=87, Percent_Identity=42.5287356321839, Blast_Score=82, Evalue=5e-16,
Organism=Saccharomyces cerevisiae, GI6324217, Length=354, Percent_Identity=37.5706214689266, Blast_Score=231, Evalue=2e-61,
Organism=Saccharomyces cerevisiae, GI6320224, Length=375, Percent_Identity=32.8, Blast_Score=220, Evalue=4e-58,
Organism=Saccharomyces cerevisiae, GI6321360, Length=361, Percent_Identity=37.9501385041551, Blast_Score=218, Evalue=2e-57,
Organism=Saccharomyces cerevisiae, GI6325138, Length=361, Percent_Identity=36.5650969529086, Blast_Score=214, Evalue=3e-56,
Organism=Saccharomyces cerevisiae, GI6324778, Length=368, Percent_Identity=36.1413043478261, Blast_Score=208, Evalue=1e-54,
Organism=Saccharomyces cerevisiae, GI6320041, Length=362, Percent_Identity=31.2154696132597, Blast_Score=202, Evalue=7e-53,
Organism=Saccharomyces cerevisiae, GI6321856, Length=369, Percent_Identity=36.3143631436314, Blast_Score=201, Evalue=2e-52,
Organism=Saccharomyces cerevisiae, GI6324620, Length=362, Percent_Identity=34.8066298342541, Blast_Score=193, Evalue=5e-50,
Organism=Saccharomyces cerevisiae, GI6322427, Length=362, Percent_Identity=34.2541436464088, Blast_Score=190, Evalue=4e-49,
Organism=Saccharomyces cerevisiae, GI6323021, Length=361, Percent_Identity=34.0720221606648, Blast_Score=189, Evalue=6e-49,
Organism=Saccharomyces cerevisiae, GI6322912, Length=344, Percent_Identity=34.0116279069767, Blast_Score=181, Evalue=3e-46,
Organism=Saccharomyces cerevisiae, GI6322323, Length=344, Percent_Identity=34.0116279069767, Blast_Score=181, Evalue=3e-46,
Organism=Saccharomyces cerevisiae, GI6320119, Length=362, Percent_Identity=29.5580110497238, Blast_Score=179, Evalue=7e-46,
Organism=Saccharomyces cerevisiae, GI6320449, Length=391, Percent_Identity=30.9462915601023, Blast_Score=179, Evalue=1e-45,
Organism=Saccharomyces cerevisiae, GI6321963, Length=372, Percent_Identity=34.1397849462366, Blast_Score=175, Evalue=1e-44,
Organism=Saccharomyces cerevisiae, GI6321111, Length=382, Percent_Identity=31.6753926701571, Blast_Score=173, Evalue=5e-44,
Organism=Saccharomyces cerevisiae, GI6323947, Length=358, Percent_Identity=34.3575418994413, Blast_Score=171, Evalue=2e-43,
Organism=Saccharomyces cerevisiae, GI6319618, Length=532, Percent_Identity=28.0075187969925, Blast_Score=171, Evalue=3e-43,
Organism=Saccharomyces cerevisiae, GI6319714, Length=422, Percent_Identity=27.7251184834123, Blast_Score=161, Evalue=2e-40,
Organism=Saccharomyces cerevisiae, GI6320400, Length=375, Percent_Identity=27.2, Blast_Score=137, Evalue=3e-33,
Organism=Saccharomyces cerevisiae, GI6320173, Length=201, Percent_Identity=36.318407960199, Blast_Score=135, Evalue=2e-32,
Organism=Saccharomyces cerevisiae, GI6321267, Length=364, Percent_Identity=28.021978021978, Blast_Score=130, Evalue=6e-31,
Organism=Saccharomyces cerevisiae, GI6323306, Length=424, Percent_Identity=25.4716981132075, Blast_Score=122, Evalue=1e-28,
Organism=Saccharomyces cerevisiae, GI6322876, Length=493, Percent_Identity=26.1663286004057, Blast_Score=115, Evalue=1e-26,
Organism=Saccharomyces cerevisiae, GI6324366, Length=384, Percent_Identity=24.21875, Blast_Score=104, Evalue=4e-23,
Organism=Drosophila melanogaster, GI28574962, Length=353, Percent_Identity=39.6600566572238, Blast_Score=231, Evalue=8e-61,
Organism=Drosophila melanogaster, GI21355075, Length=353, Percent_Identity=36.8271954674221, Blast_Score=227, Evalue=2e-59,
Organism=Drosophila melanogaster, GI24645031, Length=376, Percent_Identity=35.9042553191489, Blast_Score=225, Evalue=6e-59,
Organism=Drosophila melanogaster, GI24644483, Length=367, Percent_Identity=36.5122615803815, Blast_Score=219, Evalue=4e-57,
Organism=Drosophila melanogaster, GI281361218, Length=367, Percent_Identity=36.5122615803815, Blast_Score=219, Evalue=4e-57,
Organism=Drosophila melanogaster, GI24644481, Length=367, Percent_Identity=36.5122615803815, Blast_Score=219, Evalue=4e-57,
Organism=Drosophila melanogaster, GI24644487, Length=367, Percent_Identity=36.5122615803815, Blast_Score=219, Evalue=4e-57,
Organism=Drosophila melanogaster, GI45551833, Length=367, Percent_Identity=36.5122615803815, Blast_Score=219, Evalue=4e-57,
Organism=Drosophila melanogaster, GI24644485, Length=367, Percent_Identity=36.5122615803815, Blast_Score=219, Evalue=4e-57,
Organism=Drosophila melanogaster, GI24644479, Length=367, Percent_Identity=36.5122615803815, Blast_Score=218, Evalue=5e-57,
Organism=Drosophila melanogaster, GI24662330, Length=369, Percent_Identity=36.3143631436314, Blast_Score=217, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24585582, Length=373, Percent_Identity=35.9249329758713, Blast_Score=206, Evalue=3e-53,
Organism=Drosophila melanogaster, GI17136814, Length=377, Percent_Identity=35.8090185676393, Blast_Score=206, Evalue=4e-53,
Organism=Drosophila melanogaster, GI28575014, Length=374, Percent_Identity=33.6898395721925, Blast_Score=205, Evalue=6e-53,
Organism=Drosophila melanogaster, GI18857967, Length=367, Percent_Identity=34.3324250681199, Blast_Score=204, Evalue=1e-52,
Organism=Drosophila melanogaster, GI24584399, Length=434, Percent_Identity=32.258064516129, Blast_Score=203, Evalue=2e-52,
Organism=Drosophila melanogaster, GI24642151, Length=360, Percent_Identity=33.0555555555556, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI21356161, Length=362, Percent_Identity=37.0165745856354, Blast_Score=199, Evalue=2e-51,
Organism=Drosophila melanogaster, GI281365720, Length=310, Percent_Identity=40.3225806451613, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI17985987, Length=385, Percent_Identity=34.2857142857143, Blast_Score=195, Evalue=5e-50,
Organism=Drosophila melanogaster, GI24582080, Length=375, Percent_Identity=33.3333333333333, Blast_Score=192, Evalue=5e-49,
Organism=Drosophila melanogaster, GI24582078, Length=375, Percent_Identity=33.3333333333333, Blast_Score=192, Evalue=5e-49,
Organism=Drosophila melanogaster, GI17136248, Length=375, Percent_Identity=33.3333333333333, Blast_Score=192, Evalue=5e-49,
Organism=Drosophila melanogaster, GI24582075, Length=375, Percent_Identity=33.3333333333333, Blast_Score=192, Evalue=5e-49,
Organism=Drosophila melanogaster, GI17977678, Length=358, Percent_Identity=34.3575418994413, Blast_Score=191, Evalue=8e-49,
Organism=Drosophila melanogaster, GI24581954, Length=352, Percent_Identity=33.2386363636364, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI24581952, Length=352, Percent_Identity=33.2386363636364, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI24581956, Length=352, Percent_Identity=33.2386363636364, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI24583279, Length=362, Percent_Identity=29.2817679558011, Blast_Score=184, Evalue=7e-47,
Organism=Drosophila melanogaster, GI24583281, Length=362, Percent_Identity=29.2817679558011, Blast_Score=184, Evalue=8e-47,
Organism=Drosophila melanogaster, GI24584994, Length=382, Percent_Identity=30.3664921465969, Blast_Score=180, Evalue=1e-45,
Organism=Drosophila melanogaster, GI28571808, Length=366, Percent_Identity=32.7868852459016, Blast_Score=165, Evalue=6e-41,
Organism=Drosophila melanogaster, GI28571809, Length=366, Percent_Identity=32.7868852459016, Blast_Score=165, Evalue=6e-41,
Organism=Drosophila melanogaster, GI17647335, Length=366, Percent_Identity=29.2349726775956, Blast_Score=159, Evalue=3e-39,
Organism=Drosophila melanogaster, GI24642822, Length=383, Percent_Identity=29.7650130548303, Blast_Score=149, Evalue=3e-36,
Organism=Drosophila melanogaster, GI21355559, Length=383, Percent_Identity=31.0704960835509, Blast_Score=146, Evalue=2e-35,
Organism=Drosophila melanogaster, GI18859659, Length=444, Percent_Identity=27.4774774774775, Blast_Score=140, Evalue=1e-33,
Organism=Drosophila melanogaster, GI28571338, Length=444, Percent_Identity=27.4774774774775, Blast_Score=140, Evalue=1e-33,
Organism=Drosophila melanogaster, GI24668515, Length=326, Percent_Identity=31.5950920245399, Blast_Score=140, Evalue=3e-33,
Organism=Drosophila melanogaster, GI24643725, Length=391, Percent_Identity=27.8772378516624, Blast_Score=137, Evalue=2e-32,
Organism=Drosophila melanogaster, GI24666101, Length=377, Percent_Identity=30.2387267904509, Blast_Score=135, Evalue=5e-32,
Organism=Drosophila melanogaster, GI19920478, Length=381, Percent_Identity=29.6587926509186, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI20130173, Length=447, Percent_Identity=25.2796420581655, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI17136666, Length=402, Percent_Identity=28.1094527363184, Blast_Score=109, Evalue=4e-24,
Organism=Drosophila melanogaster, GI24640164, Length=346, Percent_Identity=23.6994219653179, Blast_Score=87, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005580
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 49902; Mature: 49771

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSSFASLPLTPEMLANLDALGYVTMTPVQAQSLPLLLKGHDVIAQASTGSGKTAAFGL
CCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCEEEECCEEEEECCCCCCCEEEEEC
GLLHPLNPRYYGCQALVLCPTRELADQVAVEIRRLARGPGNIKVLTLCGGQPIGPQIGSL
HHCCCCCCCEECEEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCC
EHGAQIVVGTPGRVLKHLSKGTLSLDGLNTLVLDEADRMLDMGFYDSIAEVIRQTPPRRQ
CCCCEEEEECCHHHHHHHHCCCEEECCCCEEEECCHHHHHHCCHHHHHHHHHHCCCCCCC
TLLFSATYPPGIKQLAETFMSNPQHVEVETLHDNSQIEQRYYEVEPFQREEAVASAIACF
EEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHH
RPVSCVVFCVTKQQCQDVVNQLCRQGLSAMVLNSDLEQRERDEVLTLFANRSLSVLVATD
CHHHHEEEEECHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHEEEEECCCEEEEEEEC
VAARGLDIDNLDMVINAELSHEPQTHIHRVGRTGRAGEKGLAINLVAPRESRRAIAIEQL
HHHCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEHHHH
QGAPLNWHPLNSLKPREGEPMQPPTITLCIGAGRKDKLRPGDILGALTGDAGIAGNQVGK
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCEE
ITVTDYQAYVAIDRESADLALERLLKGKIKGKNRRVKKL
EEEEEEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TDSSFASLPLTPEMLANLDALGYVTMTPVQAQSLPLLLKGHDVIAQASTGSGKTAAFGL
CCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCEEEECCEEEEECCCCCCCEEEEEC
GLLHPLNPRYYGCQALVLCPTRELADQVAVEIRRLARGPGNIKVLTLCGGQPIGPQIGSL
HHCCCCCCCEECEEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCC
EHGAQIVVGTPGRVLKHLSKGTLSLDGLNTLVLDEADRMLDMGFYDSIAEVIRQTPPRRQ
CCCCEEEEECCHHHHHHHHCCCEEECCCCEEEECCHHHHHHCCHHHHHHHHHHCCCCCCC
TLLFSATYPPGIKQLAETFMSNPQHVEVETLHDNSQIEQRYYEVEPFQREEAVASAIACF
EEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHH
RPVSCVVFCVTKQQCQDVVNQLCRQGLSAMVLNSDLEQRERDEVLTLFANRSLSVLVATD
CHHHHEEEEECHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHEEEEECCCEEEEEEEC
VAARGLDIDNLDMVINAELSHEPQTHIHRVGRTGRAGEKGLAINLVAPRESRRAIAIEQL
HHHCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEHHHH
QGAPLNWHPLNSLKPREGEPMQPPTITLCIGAGRKDKLRPGDILGALTGDAGIAGNQVGK
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCEE
ITVTDYQAYVAIDRESADLALERLLKGKIKGKNRRVKKL
EEEEEEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]