| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is apaH [H]
Identifier: 110834911
GI number: 110834911
Start: 2338742
End: 2339548
Strand: Direct
Name: apaH [H]
Synonym: ABO_2050
Alternate gene names: 110834911
Gene position: 2338742-2339548 (Clockwise)
Preceding gene: 110834910
Following gene: 110834913
Centisome position: 74.96
GC content: 60.1
Gene sequence:
>807_bases ATGAGCGATTACGCCATTGGCGATCTGCAGGGCTGCCTAGGCGCGTTTGACTGTTTGCTGGAAAAGCTTAGCTTCAATGC CGACCGCGACCGCCTGTTTCTCGCGGGAGACCTGGTCAACCGGGGGCCGGACTCACTAGGCACCCTGCGGCGCGTCCACG CCCTGCGCGACAATGTACATACCGTGCTAGGCAACCACGACCTACACCTGCTGGCCGTGGCCAACGGCACCATTCCCAGT AAACGTAAAGACACTCTCAGCGAAATTTTAAACGCACCGGATCGTGATGAACTGCTGGGCTGGCTACAACAACAACCGCT GCTTATTAACCTACCAGAACATAATGCAGTGATGACCCACGCCGGCATTCCGCCGCTGTGGTCACTGGCCCAGGCCAGCC AGCGCGCAGCGGAAGTGGAAACCGTGCTGCGTAACCACTCGGCCGGCACATTTTTTACTCACATGTACGGCAATACCCCC GCCGGCTGGGACGAGAAGCTGAGTGGCCCAGACCGCTGGCGGGTGATCACCAACCACTTCACCCGCATGCGTTTTGTAGA TCAGGCCGCAGAGCTGGACCTGACTAGCAAAGGTGAGCCCGACTTGCCCCCCGCCGGGTTCATTCCCTGGTTCCAGCACC CCGGCCGAATCGTCACCGATACTCGCATCCTGTTCGGCCACTGGGCTGCCCTGCAAGGCCACAGTGGCGTCGACAAGGTC GACGCACTAGACACCGGGTGCGTGTGGGGAGGGTCCTTAACTGCACTACGGCTAGACGACTTGGTTCGCATTCAGTGCCA CTGCTAG
Upstream 100 bases:
>100_bases CCCAACATATGGCCGATGGGGACATCATTGTTTTAGCCCGTAAAAGCGCAAGCGTCGAGCATCAAGCACCCAGCATCAGG CGTATCACCGGAGACGCCTT
Downstream 100 bases:
>100_bases GCGTCAGCCTTCGTTAGTTGCTTCAGCTGGCGGCGTATCTTGTGGTCCCCCAGCAGAAACAGCGACAGTGCCAGCACGAT TAACGCGGCACCCACCAGCA
Product: diadenosine tetraphosphatase
Products: NA
Alternate protein names: Ap4A hydrolase; Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase; Diadenosine tetraphosphatase [H]
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSDYAIGDLQGCLGAFDCLLEKLSFNADRDRLFLAGDLVNRGPDSLGTLRRVHALRDNVHTVLGNHDLHLLAVANGTIPS KRKDTLSEILNAPDRDELLGWLQQQPLLINLPEHNAVMTHAGIPPLWSLAQASQRAAEVETVLRNHSAGTFFTHMYGNTP AGWDEKLSGPDRWRVITNHFTRMRFVDQAAELDLTSKGEPDLPPAGFIPWFQHPGRIVTDTRILFGHWAALQGHSGVDKV DALDTGCVWGGSLTALRLDDLVRIQCHC
Sequences:
>Translated_268_residues MSDYAIGDLQGCLGAFDCLLEKLSFNADRDRLFLAGDLVNRGPDSLGTLRRVHALRDNVHTVLGNHDLHLLAVANGTIPS KRKDTLSEILNAPDRDELLGWLQQQPLLINLPEHNAVMTHAGIPPLWSLAQASQRAAEVETVLRNHSAGTFFTHMYGNTP AGWDEKLSGPDRWRVITNHFTRMRFVDQAAELDLTSKGEPDLPPAGFIPWFQHPGRIVTDTRILFGHWAALQGHSGVDKV DALDTGCVWGGSLTALRLDDLVRIQCHC >Mature_267_residues SDYAIGDLQGCLGAFDCLLEKLSFNADRDRLFLAGDLVNRGPDSLGTLRRVHALRDNVHTVLGNHDLHLLAVANGTIPSK RKDTLSEILNAPDRDELLGWLQQQPLLINLPEHNAVMTHAGIPPLWSLAQASQRAAEVETVLRNHSAGTFFTHMYGNTPA GWDEKLSGPDRWRVITNHFTRMRFVDQAAELDLTSKGEPDLPPAGFIPWFQHPGRIVTDTRILFGHWAALQGHSGVDKVD ALDTGCVWGGSLTALRLDDLVRIQCHC
Specific function: Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP [H]
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ap4A hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1786234, Length=260, Percent_Identity=50, Blast_Score=246, Evalue=1e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004617 - InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: =3.6.1.41 [H]
Molecular weight: Translated: 29644; Mature: 29513
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDYAIGDLQGCLGAFDCLLEKLSFNADRDRLFLAGDLVNRGPDSLGTLRRVHALRDNVH CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHCCCHHHHHHHHHHHHHHHHH TVLGNHDLHLLAVANGTIPSKRKDTLSEILNAPDRDELLGWLQQQPLLINLPEHNAVMTH HHHCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCCEEEEE AGIPPLWSLAQASQRAAEVETVLRNHSAGTFFTHMYGNTPAGWDEKLSGPDRWRVITNHF CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH TRMRFVDQAAELDLTSKGEPDLPPAGFIPWFQHPGRIVTDTRILFGHWAALQGHSGVDKV HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCEEEECCEEEHHHHHHHCCCCCCCHH DALDTGCVWGGSLTALRLDDLVRIQCHC HHCCCCCEECCCEEEEECCCEEEEEECC >Mature Secondary Structure SDYAIGDLQGCLGAFDCLLEKLSFNADRDRLFLAGDLVNRGPDSLGTLRRVHALRDNVH CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHCCCHHHHHHHHHHHHHHHHH TVLGNHDLHLLAVANGTIPSKRKDTLSEILNAPDRDELLGWLQQQPLLINLPEHNAVMTH HHHCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCCEEEEE AGIPPLWSLAQASQRAAEVETVLRNHSAGTFFTHMYGNTPAGWDEKLSGPDRWRVITNHF CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH TRMRFVDQAAELDLTSKGEPDLPPAGFIPWFQHPGRIVTDTRILFGHWAALQGHSGVDKV HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCEEEECCEEEHHHHHHHCCCCCCCHH DALDTGCVWGGSLTALRLDDLVRIQCHC HHCCCCCEECCCEEEEECCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA