Click here to switch to the map view.

The map label for this gene is 110834894

Identifier: 110834894

GI number: 110834894

Start: 2320569

End: 2321288

Strand: Reverse

Name: 110834894

Synonym: ABO_2033

Alternate gene names: NA

Gene position: 2321288-2320569 (Counterclockwise)

Preceding gene: 110834895

Following gene: 110834893

Centisome position: 74.4

GC content: 57.78

Gene sequence:

>720_bases
ATGACCATGGCTCGCCGGCGTATTCATTCTTTCCTTTTTCTGCTGTTAACCGCGGTGGCCTTCGTTGGGTTTGTGGCGTT
GGGTGTTTGGCAGGTGAAGCGGCTGGCCTGGAAGGAAAATTTGATCGCTCGCGTGGACACTCGGGTGCACGCTGAAGCGA
TGCTCGCCCCGTCGCAACATGACTGGCCCACTGTCAGTGAGGACACCCATGAATATCTTCATGTTAGTGTCCGTGGCCGA
TATCAGCCCCAGGCTGTTGCGTTGGTGTCGGCAGCCACCGAAGCGGGGCAAGGCTACTGGCTGATGGCACCGTTACAGTG
TGCCGATGGTAGCTGGGTGTATGTGAACCAGGGGTTTGTACCCCAGCAGCAACGCCAGGCTGCACAATCGGGTGAATATA
CGCCGGCTGAGCTGGTCACTGTCACCGGGCTGTTGCGCCTTAGCCATCCGGGCGGGGGCGTATTGCGAGATAATGTGCCT
GACGAGAATCGCTGGTACTCACGGGATGTGAAGGCCATGGCCGAGCGGAATGGTTTGTCTCCGGTGGCTCCCTATTTTAT
CGATGCGCAAGCCGATGACAGTGAGCTACCCGTGGGGGGGCTTACCGTCATTCATTTCCGTAATAATCATCTAGTCTACG
CCATCACTTGGTTTGCCCTTGCCTTCGGCATGGTGCTGGCGGCTTGGCTGGTGCTACGGGATTCACCCCGAACGCGCTAA

Upstream 100 bases:

>100_bases
ATGCACGCCCCGGTCGCAACACCTCACACGCACTCATGCGTAGGGCGGAGATCGGCGTTGCCGGTCTCCGCCTTTTTCTC
CCCTCCACGTTTGAAGAGGC

Downstream 100 bases:

>100_bases
ACTGGGGCTATGGAAATCATGTCATCGTCCTCACCCTCTAAGACTCCTCCATCGGGATCGTTATTTTCTGCACTGCGCCG
CAGTAGCGACGACCTGACCG

Product: SurF1 family protein

Products: NA

Alternate protein names: Surf1 Family Protein; SurF1 Family Protein; SURF1 Family Protein; Surfeit Locus; Surfeit 1 Protein; Surfeit Protein; SURF1 Family; SURF1 Protein; Cytochrome Oxidase Complex Biogenesis Factor Protein; Transmembrane Cytochrome Oxidase Complex Biogenesis Protein; SUR1-Like Protein; Cytochrome C Oxidase Assembly Protein; Cytochrome C Oxidase Assembly; Surfeit Locus Protein; Surf1-Like Function; SURF-1 Protein; Surf1 Protein; Exported SurF1-Family Protein; Cytochrome C Oxidase Complex Biogenesis Factor Protein; Transmembrane Cytochrome Oxidase Biogenesis Protein

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MTMARRRIHSFLFLLLTAVAFVGFVALGVWQVKRLAWKENLIARVDTRVHAEAMLAPSQHDWPTVSEDTHEYLHVSVRGR
YQPQAVALVSAATEAGQGYWLMAPLQCADGSWVYVNQGFVPQQQRQAAQSGEYTPAELVTVTGLLRLSHPGGGVLRDNVP
DENRWYSRDVKAMAERNGLSPVAPYFIDAQADDSELPVGGLTVIHFRNNHLVYAITWFALAFGMVLAAWLVLRDSPRTR

Sequences:

>Translated_239_residues
MTMARRRIHSFLFLLLTAVAFVGFVALGVWQVKRLAWKENLIARVDTRVHAEAMLAPSQHDWPTVSEDTHEYLHVSVRGR
YQPQAVALVSAATEAGQGYWLMAPLQCADGSWVYVNQGFVPQQQRQAAQSGEYTPAELVTVTGLLRLSHPGGGVLRDNVP
DENRWYSRDVKAMAERNGLSPVAPYFIDAQADDSELPVGGLTVIHFRNNHLVYAITWFALAFGMVLAAWLVLRDSPRTR
>Mature_238_residues
TMARRRIHSFLFLLLTAVAFVGFVALGVWQVKRLAWKENLIARVDTRVHAEAMLAPSQHDWPTVSEDTHEYLHVSVRGRY
QPQAVALVSAATEAGQGYWLMAPLQCADGSWVYVNQGFVPQQQRQAAQSGEYTPAELVTVTGLLRLSHPGGGVLRDNVPD
ENRWYSRDVKAMAERNGLSPVAPYFIDAQADDSELPVGGLTVIHFRNNHLVYAITWFALAFGMVLAAWLVLRDSPRTR

Specific function: Unknown

COG id: COG3346

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4507319, Length=239, Percent_Identity=33.4728033472803, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17553856, Length=238, Percent_Identity=28.5714285714286, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI17864366, Length=232, Percent_Identity=30.1724137931034, Blast_Score=82, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26713; Mature: 26582

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: PS50895 SURF1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMARRRIHSFLFLLLTAVAFVGFVALGVWQVKRLAWKENLIARVDTRVHAEAMLAPSQH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DWPTVSEDTHEYLHVSVRGRYQPQAVALVSAATEAGQGYWLMAPLQCADGSWVYVNQGFV
CCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEECCCC
PQQQRQAAQSGEYTPAELVTVTGLLRLSHPGGGVLRDNVPDENRWYSRDVKAMAERNGLS
CHHHHHHHHCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
PVAPYFIDAQADDSELPVGGLTVIHFRNNHLVYAITWFALAFGMVLAAWLVLRDSPRTR
CCCCEEEECCCCCCCCCCCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TMARRRIHSFLFLLLTAVAFVGFVALGVWQVKRLAWKENLIARVDTRVHAEAMLAPSQH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DWPTVSEDTHEYLHVSVRGRYQPQAVALVSAATEAGQGYWLMAPLQCADGSWVYVNQGFV
CCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEECCCC
PQQQRQAAQSGEYTPAELVTVTGLLRLSHPGGGVLRDNVPDENRWYSRDVKAMAERNGLS
CHHHHHHHHCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
PVAPYFIDAQADDSELPVGGLTVIHFRNNHLVYAITWFALAFGMVLAAWLVLRDSPRTR
CCCCEEEECCCCCCCCCCCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA