| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is coq7
Identifier: 110834881
GI number: 110834881
Start: 2309573
End: 2310232
Strand: Direct
Name: coq7
Synonym: ABO_2020
Alternate gene names: 110834881
Gene position: 2309573-2310232 (Clockwise)
Preceding gene: 110834879
Following gene: 110834884
Centisome position: 74.02
GC content: 61.36
Gene sequence:
>660_bases ATGACTGAACGCCGACTGTCTCCTCTGGACAAGCTACTCGCCCGCGCTGATAACGCCCTGCGAACCCTGACCCCTGGCAC CACCCAGGCAGAGCGAACGCCCGCCCATGCCGCTCCAGCGCCGGACGCCCCGGAAGCCGGCACCCTGCCCAGCGACCAGC GCCGACACGTGCTGGGGCTAATGCGTATTAACCATACCGGAGAAGTCTGCGCCCAGGCGCTCTATCAAGGCCAAGCCAGT ACCGCCAGCCTGCCGCATATTCGCCACGCCATGGAAGAATCCGCACGGGAAGAGGAAGACCATCTAGCCTGGTGCGAAGA GCGCATTCAGGAGCTCGGCGGCGTGCCCAGCAAGCTTAATCCACTGTTCTATGCCATGAGCTATGCAGTGGGCGCCACCG CTGGCCTGATCGGCGACCGCTGGAGCCTAGGCTTTGTCACCGAAACAGAGAATCAAGTAGTCAAACATCTGGAATCCCAC CTGTACCAGGTGCCAGAAAGCGACCTGCGCACCCGCGCCATTCTTGAGCAAATGAAAACCGACGAACTCAAGCACGCGGT CACCGCTAAGGACGCCGGCGGCGCCGACCTCCCCTCACCGGTACGCCACGCCATGACGCTAATGAGTAAGGTGATGACAT TCACCACCTACAGGATCTAA
Upstream 100 bases:
>100_bases GTAGGGTGCTTCAATTCAGCCATTCTTAGGCTACACTAGGAGCCACTCACTTTTCACGCTGCAAGCCTTTGGCTTGCTTG CCTGCCAGCGATAATTTGCC
Downstream 100 bases:
>100_bases TCAACGCTCTAACCACTCTGTAGCCGGCGTCCAGCAACAAAAAAAGCCGCACCCTGTACGGGCGCGGCTTTTTTATTCTG CGTGTTACGTGGAAGCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: 5-demethoxyubiquinone hydroxylase; DMQ hydroxylase
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MTERRLSPLDKLLARADNALRTLTPGTTQAERTPAHAAPAPDAPEAGTLPSDQRRHVLGLMRINHTGEVCAQALYQGQAS TASLPHIRHAMEESAREEEDHLAWCEERIQELGGVPSKLNPLFYAMSYAVGATAGLIGDRWSLGFVTETENQVVKHLESH LYQVPESDLRTRAILEQMKTDELKHAVTAKDAGGADLPSPVRHAMTLMSKVMTFTTYRI
Sequences:
>Translated_219_residues MTERRLSPLDKLLARADNALRTLTPGTTQAERTPAHAAPAPDAPEAGTLPSDQRRHVLGLMRINHTGEVCAQALYQGQAS TASLPHIRHAMEESAREEEDHLAWCEERIQELGGVPSKLNPLFYAMSYAVGATAGLIGDRWSLGFVTETENQVVKHLESH LYQVPESDLRTRAILEQMKTDELKHAVTAKDAGGADLPSPVRHAMTLMSKVMTFTTYRI >Mature_218_residues TERRLSPLDKLLARADNALRTLTPGTTQAERTPAHAAPAPDAPEAGTLPSDQRRHVLGLMRINHTGEVCAQALYQGQAST ASLPHIRHAMEESAREEEDHLAWCEERIQELGGVPSKLNPLFYAMSYAVGATAGLIGDRWSLGFVTETENQVVKHLESHL YQVPESDLRTRAILEQMKTDELKHAVTAKDAGGADLPSPVRHAMTLMSKVMTFTTYRI
Specific function: Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
COG id: COG2941
COG function: function code H; Ubiquinone biosynthesis protein COQ7
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the COQ7 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COQ7_ALCBS (Q0VMY0)
Other databases:
- EMBL: AM286690 - RefSeq: YP_693740.1 - ProteinModelPortal: Q0VMY0 - STRING: Q0VMY0 - GeneID: 4212065 - GenomeReviews: AM286690_GR - KEGG: abo:ABO_2020 - NMPDR: fig|393595.12.peg.2022 - eggNOG: COG2941 - HOGENOM: HBG289195 - OMA: YQGQALT - ProtClustDB: CLSK866016 - BioCyc: ABOR393595:ABO_2020-MONOMER - HAMAP: MF_01658 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR011566 - Gene3D: G3DSA:1.20.1260.10 - PANTHER: PTHR11237
Pfam domain/function: PF03232 COQ7; SSF47240 Ferritin/RR_like
EC number: 1.14.13.-
Molecular weight: Translated: 24131; Mature: 23999
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTERRLSPLDKLLARADNALRTLTPGTTQAERTPAHAAPAPDAPEAGTLPSDQRRHVLGL CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH MRINHTGEVCAQALYQGQASTASLPHIRHAMEESAREEEDHLAWCEERIQELGGVPSKLN HHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH PLFYAMSYAVGATAGLIGDRWSLGFVTETENQVVKHLESHLYQVPESDLRTRAILEQMKT HHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH DELKHAVTAKDAGGADLPSPVRHAMTLMSKVMTFTTYRI HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TERRLSPLDKLLARADNALRTLTPGTTQAERTPAHAAPAPDAPEAGTLPSDQRRHVLGL CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH MRINHTGEVCAQALYQGQASTASLPHIRHAMEESAREEEDHLAWCEERIQELGGVPSKLN HHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH PLFYAMSYAVGATAGLIGDRWSLGFVTETENQVVKHLESHLYQVPESDLRTRAILEQMKT HHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH DELKHAVTAKDAGGADLPSPVRHAMTLMSKVMTFTTYRI HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA