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The map label for this gene is rssA [H]

Identifier: 110834861

GI number: 110834861

Start: 2287581

End: 2288924

Strand: Reverse

Name: rssA [H]

Synonym: ABO_2000

Alternate gene names: 110834861

Gene position: 2288924-2287581 (Counterclockwise)

Preceding gene: 110834862

Following gene: 110834860

Centisome position: 73.36

GC content: 54.02

Gene sequence:

>1344_bases
ATGATTTTTTCCATTCGTCGCTTTCTGGTTGTATCACTGTTGCTGGTGATCGCCGGTGGCGGGGTCTTATTGGTCTTTTT
GACTTATCGCACTCTCTATCATGAGCTGGATGAACAATACGACGCAGAGCTGGTGCAAAGTGCACGTCTGCTGGCCGGTT
TTTGGCGGGATGGTTATCCCCCCAATGCGTCCCTGTCAGCGCTGGACTCCGAAGAGTCTCGCTACCTACGCTATTTCATC
TACCAGTTATGGCAGGACGGCAAGCTGGTTACTGCTAGTGAAGGGTCACCAATCTCACCTTTGATCGCCCTCAATCCACG
TCCTCATTATGCAGAAATCAACGGCTGGCATGCTTATTCGTTGCCAATGACCAATGATCGCTGGTTGATCCTGGCGGAAA
GTGATTACGCCCGTCAATCCATGGTCAGAAATGTGGCAGGAGCATTGGTGGCTCCCTACCTGATCAGTGTGCCTTTTGTT
GTGTTGCTAGTATGGCTGGCCATTCGTTTTGGACTCTCGCCACTCTCCGATCTTATTCAATCCGTGAGCCAACGTTCTCC
GGATAATCTGACTCCGCTCTCCATCGGTAAGCAGGTGTGTGAACTGGAACCTGTGAAGGCCGCCATCAATGAGCTCTTGC
TGCGACTGGAGGCGGGTATGGAGCGTGAAAAGCGTTTTACGGCAGATGCTGCGCATGAATTGCGAACATTATTGATGGTG
TTGCGGCTGCATGCAGATAACGCTCGCTCACTGCCGGATCCGCAGCAGCGCGAAGAGTCCCTACAAGGGCTGCAGGAGGC
AGTGGGTCGTGCCGAACGGATGCTCGAACAATTGCTGGTGCTGGCGCGTTTGGACCCTGCCATGGGGCCGCCGAAAAAGA
ATGCTCGTGCTGATATTCTGCCGGTGGCACGGGATACCCTGGCGTCACTGGTGCCGCTAGGCGATCGTTTTGAGCAGCAT
CTGGAATTGCGCCTTGATCATTCTCTATGGGTTGCTGTCCCCGAGGAAGCTCTGCATCTGGTGTTACGGAACTTGGTCGA
TAATGCTTGCCGCTATACCCCCCCGGGGGTTATCGGAGTGAACGCTGAGAAAAGAGAAGGTCAAATCCGTATCGAGGTCT
ACGATAGCGGTGAAGGGCTGAGGCTAGAGCAGTGGCAGCGCTACAGTGAACGCTTCAGCCGCGGGCATTGCGATTCAGAT
GGCGCGGGATTGGGTCTATCTATTGTCAATGGCATCCTCAGCCTTTATGGCGGTAGCTTGGCTTATCGCAAACGGTGTGC
GAGCTCTCCTGCAGCTGCTATTGTTGTTCTCCCTGCCGCTAATGAAGAGCCTACGCTGTCGTAG

Upstream 100 bases:

>100_bases
ACGCACTGGAAGTCCACATACATCATTTGCGTAAAAAGTTGGGAAGCGACTTGATTCGGACTGTGCGTGGTGTCGGCTAC
AGCCTGCAGGGAACTATGGA

Downstream 100 bases:

>100_bases
TGGTGTGCCGATGTTGGGAGTGATAATGAGTAACGATAAATTTAATGAAAAACTGGGGGATGCCATGCTGGACCCCCGTA
ATAACCGAATATGGAAAGGG

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MIFSIRRFLVVSLLLVIAGGGVLLVFLTYRTLYHELDEQYDAELVQSARLLAGFWRDGYPPNASLSALDSEESRYLRYFI
YQLWQDGKLVTASEGSPISPLIALNPRPHYAEINGWHAYSLPMTNDRWLILAESDYARQSMVRNVAGALVAPYLISVPFV
VLLVWLAIRFGLSPLSDLIQSVSQRSPDNLTPLSIGKQVCELEPVKAAINELLLRLEAGMEREKRFTADAAHELRTLLMV
LRLHADNARSLPDPQQREESLQGLQEAVGRAERMLEQLLVLARLDPAMGPPKKNARADILPVARDTLASLVPLGDRFEQH
LELRLDHSLWVAVPEEALHLVLRNLVDNACRYTPPGVIGVNAEKREGQIRIEVYDSGEGLRLEQWQRYSERFSRGHCDSD
GAGLGLSIVNGILSLYGGSLAYRKRCASSPAAAIVVLPAANEEPTLS

Sequences:

>Translated_447_residues
MIFSIRRFLVVSLLLVIAGGGVLLVFLTYRTLYHELDEQYDAELVQSARLLAGFWRDGYPPNASLSALDSEESRYLRYFI
YQLWQDGKLVTASEGSPISPLIALNPRPHYAEINGWHAYSLPMTNDRWLILAESDYARQSMVRNVAGALVAPYLISVPFV
VLLVWLAIRFGLSPLSDLIQSVSQRSPDNLTPLSIGKQVCELEPVKAAINELLLRLEAGMEREKRFTADAAHELRTLLMV
LRLHADNARSLPDPQQREESLQGLQEAVGRAERMLEQLLVLARLDPAMGPPKKNARADILPVARDTLASLVPLGDRFEQH
LELRLDHSLWVAVPEEALHLVLRNLVDNACRYTPPGVIGVNAEKREGQIRIEVYDSGEGLRLEQWQRYSERFSRGHCDSD
GAGLGLSIVNGILSLYGGSLAYRKRCASSPAAAIVVLPAANEEPTLS
>Mature_447_residues
MIFSIRRFLVVSLLLVIAGGGVLLVFLTYRTLYHELDEQYDAELVQSARLLAGFWRDGYPPNASLSALDSEESRYLRYFI
YQLWQDGKLVTASEGSPISPLIALNPRPHYAEINGWHAYSLPMTNDRWLILAESDYARQSMVRNVAGALVAPYLISVPFV
VLLVWLAIRFGLSPLSDLIQSVSQRSPDNLTPLSIGKQVCELEPVKAAINELLLRLEAGMEREKRFTADAAHELRTLLMV
LRLHADNARSLPDPQQREESLQGLQEAVGRAERMLEQLLVLARLDPAMGPPKKNARADILPVARDTLASLVPLGDRFEQH
LELRLDHSLWVAVPEEALHLVLRNLVDNACRYTPPGVIGVNAEKREGQIRIEVYDSGEGLRLEQWQRYSERFSRGHCDSD
GAGLGLSIVNGILSLYGGSLAYRKRCASSPAAAIVVLPAANEEPTLS

Specific function: Member of the two-component regulatory system rssA/rssB involved in regulation of swarming motility which has been shown to be inhibited by saturated fatty acids. RssA/rssB regulates cellular fatty acid composition, hemolysin production and cell surface t

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789403, Length=442, Percent_Identity=26.9230769230769, Blast_Score=124, Evalue=8e-30,
Organism=Escherichia coli, GI1790551, Length=306, Percent_Identity=31.3725490196078, Blast_Score=115, Evalue=5e-27,
Organism=Escherichia coli, GI1786783, Length=294, Percent_Identity=28.2312925170068, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1788393, Length=277, Percent_Identity=27.4368231046931, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1786600, Length=221, Percent_Identity=28.0542986425339, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1788279, Length=299, Percent_Identity=26.4214046822742, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 49790; Mature: 49790

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFSIRRFLVVSLLLVIAGGGVLLVFLTYRTLYHELDEQYDAELVQSARLLAGFWRDGYP
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PNASLSALDSEESRYLRYFIYQLWQDGKLVTASEGSPISPLIALNPRPHYAEINGWHAYS
CCCCCHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCCCEEECCCEEEEE
LPMTNDRWLILAESDYARQSMVRNVAGALVAPYLISVPFVVLLVWLAIRFGLSPLSDLIQ
CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SVSQRSPDNLTPLSIGKQVCELEPVKAAINELLLRLEAGMEREKRFTADAAHELRTLLMV
HHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LRLHADNARSLPDPQQREESLQGLQEAVGRAERMLEQLLVLARLDPAMGPPKKNARADIL
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
PVARDTLASLVPLGDRFEQHLELRLDHSLWVAVPEEALHLVLRNLVDNACRYTPPGVIGV
HHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEC
NAEKREGQIRIEVYDSGEGLRLEQWQRYSERFSRGHCDSDGAGLGLSIVNGILSLYGGSL
CCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHH
AYRKRCASSPAAAIVVLPAANEEPTLS
HHHHHHCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MIFSIRRFLVVSLLLVIAGGGVLLVFLTYRTLYHELDEQYDAELVQSARLLAGFWRDGYP
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PNASLSALDSEESRYLRYFIYQLWQDGKLVTASEGSPISPLIALNPRPHYAEINGWHAYS
CCCCCHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCCCEEECCCEEEEE
LPMTNDRWLILAESDYARQSMVRNVAGALVAPYLISVPFVVLLVWLAIRFGLSPLSDLIQ
CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SVSQRSPDNLTPLSIGKQVCELEPVKAAINELLLRLEAGMEREKRFTADAAHELRTLLMV
HHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LRLHADNARSLPDPQQREESLQGLQEAVGRAERMLEQLLVLARLDPAMGPPKKNARADIL
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
PVARDTLASLVPLGDRFEQHLELRLDHSLWVAVPEEALHLVLRNLVDNACRYTPPGVIGV
HHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEC
NAEKREGQIRIEVYDSGEGLRLEQWQRYSERFSRGHCDSDGAGLGLSIVNGILSLYGGSL
CCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHH
AYRKRCASSPAAAIVVLPAANEEPTLS
HHHHHHCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA