| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is amiE
Identifier: 110834841
GI number: 110834841
Start: 2264582
End: 2265628
Strand: Reverse
Name: amiE
Synonym: ABO_1980
Alternate gene names: 110834841
Gene position: 2265628-2264582 (Counterclockwise)
Preceding gene: 110834842
Following gene: 110834840
Centisome position: 72.61
GC content: 49.38
Gene sequence:
>1047_bases ATGCGACACGGCGATATTTCCAGCAGTAACGATACCGTGGGTGTTGCGGTAGTGAATTACAAAATGCCGCGCCTGCATAG CAAAGCTGAAGTGTTAGATAATGCCCGTAACATTGCGGAAATGATTAAGGGCATGAAAAAGGGACTGCCGGGGATGGATT TGGTGGTTTTTCCGGAATACAGCACTATGGGCATTATGTATGACCCGGATGAAATGATGGCCACAGCGGCTACCATTCCC GGTGATGAGACCGCTATTTTCTCCGCTGCCTGTCGTGAAGCTAATACCTGGGGTGTGTTTTCGCTGACGGGCGAACAACA TGAAGAGCACCCTGCGAAAGCCCCTTATAACACGCTGGTGTTAATCAATAATGAAGGGGAAATTGTTCAGAAATACCGTA AGTGTATTCCGTGGTGTCCTATTGAGGGTTGGTATCCTGGTGATACGACCTATGTAACGGAAGGTCCCAAGGGAATGAAG ATCAGCCTCATCATTTGTGATGACGGTAACTACCCGGAAATCTGGCGTGATTGTGCCATGAAAGGTGCTGAGTTGATTGT TCGTTGCCAGGGCTATATGTATCCGGCGAAGGAGCAGCAGGTGATGATGGCCAAGTCCATGGCCTGGGCGAATAACTGCT ATGTGGCTGTAGCTAACGCCAGTGGTTTTGATGGCGTGTATTCGTATTTTGGGCACTCGGCACTCATCGGGTTTGATGGT CGTACTCTGGGTGAATGTGGTGAAGAGGATATGGGTATTCAGTATGCCCAGTTATCCGTCAGTCAAATCCGTGATGCTCG TGCTAATGATCAGTCTCAAAATCATCTGTTTAAGTTGCTGCACCGTGGTTATACCGGCATGCATGCTTCTGGTGATGGAG ACAAGGGTATTGCGGACTGTCCTTTTGACTTTTATCGCACCTGGGTAATGGATGCTCAAAAGGCGCAGGAGAACGTAGAA GCCATGACACGTAGCACAATAGGGGTGGCAGAGTGTCCGGTGGGTGAATTGCCTGTGGATGGTAAAGAGAGAACGGCGGG TGAGTGA
Upstream 100 bases:
>100_bases AAGAAAGCGGTGAGAGCATGAATCAGGAAAAAATAGCGGCATATCTTGCGGTGTGATGTGCCTGTTTGCCGATGAATTTT AAGCAGTAAAGGAGAGAGTA
Downstream 100 bases:
>100_bases TGCCCTTCATCAATGAGCAGTTAGCAGCGAATCATGAGATAGCGGATCGAAAGCGAGATGCTGACCATTCTGGGAGAATG TCCCGATTTACCTTTGATCC
Product: acylamide amidohydrolase
Products: NA
Alternate protein names: Acylamide amidohydrolase
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MRHGDISSSNDTVGVAVVNYKMPRLHSKAEVLDNARNIAEMIKGMKKGLPGMDLVVFPEYSTMGIMYDPDEMMATAATIP GDETAIFSAACREANTWGVFSLTGEQHEEHPAKAPYNTLVLINNEGEIVQKYRKCIPWCPIEGWYPGDTTYVTEGPKGMK ISLIICDDGNYPEIWRDCAMKGAELIVRCQGYMYPAKEQQVMMAKSMAWANNCYVAVANASGFDGVYSYFGHSALIGFDG RTLGECGEEDMGIQYAQLSVSQIRDARANDQSQNHLFKLLHRGYTGMHASGDGDKGIADCPFDFYRTWVMDAQKAQENVE AMTRSTIGVAECPVGELPVDGKERTAGE
Sequences:
>Translated_348_residues MRHGDISSSNDTVGVAVVNYKMPRLHSKAEVLDNARNIAEMIKGMKKGLPGMDLVVFPEYSTMGIMYDPDEMMATAATIP GDETAIFSAACREANTWGVFSLTGEQHEEHPAKAPYNTLVLINNEGEIVQKYRKCIPWCPIEGWYPGDTTYVTEGPKGMK ISLIICDDGNYPEIWRDCAMKGAELIVRCQGYMYPAKEQQVMMAKSMAWANNCYVAVANASGFDGVYSYFGHSALIGFDG RTLGECGEEDMGIQYAQLSVSQIRDARANDQSQNHLFKLLHRGYTGMHASGDGDKGIADCPFDFYRTWVMDAQKAQENVE AMTRSTIGVAECPVGELPVDGKERTAGE >Mature_348_residues MRHGDISSSNDTVGVAVVNYKMPRLHSKAEVLDNARNIAEMIKGMKKGLPGMDLVVFPEYSTMGIMYDPDEMMATAATIP GDETAIFSAACREANTWGVFSLTGEQHEEHPAKAPYNTLVLINNEGEIVQKYRKCIPWCPIEGWYPGDTTYVTEGPKGMK ISLIICDDGNYPEIWRDCAMKGAELIVRCQGYMYPAKEQQVMMAKSMAWANNCYVAVANASGFDGVYSYFGHSALIGFDG RTLGECGEEDMGIQYAQLSVSQIRDARANDQSQNHLFKLLHRGYTGMHASGDGDKGIADCPFDFYRTWVMDAQKAQENVE AMTRSTIGVAECPVGELPVDGKERTAGE
Specific function: Also exhibits in vitro acyl transferase activity, transferring the acyl moiety of short-chain amides to hydroxylamine to form hydroxamates
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AMIE_ALCBS (Q0VN20)
Other databases:
- EMBL: AM286690 - RefSeq: YP_693700.1 - STRING: Q0VN20 - GeneID: 4211291 - GenomeReviews: AM286690_GR - KEGG: abo:ABO_1980 - NMPDR: fig|393595.12.peg.1981 - eggNOG: COG0388 - HOGENOM: HBG287568 - OMA: QNHLFKL - ProtClustDB: PRK13286 - BioCyc: ABOR393595:ABO_1980-MONOMER - HAMAP: MF_01242 - InterPro: IPR003010 - Gene3D: G3DSA:3.60.110.10
Pfam domain/function: PF00795 CN_hydrolase; SSF56317 Ntlse/CNhydtse
EC number: =3.5.1.4
Molecular weight: Translated: 38360; Mature: 38360
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS50263 CN_HYDROLASE
Important sites: ACT_SITE 59-59 ACT_SITE 134-134 ACT_SITE 166-166
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHGDISSSNDTVGVAVVNYKMPRLHSKAEVLDNARNIAEMIKGMKKGLPGMDLVVFPEY CCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC STMGIMYDPDEMMATAATIPGDETAIFSAACREANTWGVFSLTGEQHEEHPAKAPYNTLV CCEEEEECCHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCEEE LINNEGEIVQKYRKCIPWCPIEGWYPGDTTYVTEGPKGMKISLIICDDGNYPEIWRDCAM EECCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCHHHHHHHHH KGAELIVRCQGYMYPAKEQQVMMAKSMAWANNCYVAVANASGFDGVYSYFGHSALIGFDG CCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCEEEECCC RTLGECGEEDMGIQYAQLSVSQIRDARANDQSQNHLFKLLHRGYTGMHASGDGDKGIADC CCHHHCCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC PFDFYRTWVMDAQKAQENVEAMTRSTIGVAECPVGELPVDGKERTAGE CHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRHGDISSSNDTVGVAVVNYKMPRLHSKAEVLDNARNIAEMIKGMKKGLPGMDLVVFPEY CCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC STMGIMYDPDEMMATAATIPGDETAIFSAACREANTWGVFSLTGEQHEEHPAKAPYNTLV CCEEEEECCHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCEEE LINNEGEIVQKYRKCIPWCPIEGWYPGDTTYVTEGPKGMKISLIICDDGNYPEIWRDCAM EECCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCHHHHHHHHH KGAELIVRCQGYMYPAKEQQVMMAKSMAWANNCYVAVANASGFDGVYSYFGHSALIGFDG CCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCEEEECCC RTLGECGEEDMGIQYAQLSVSQIRDARANDQSQNHLFKLLHRGYTGMHASGDGDKGIADC CCHHHCCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC PFDFYRTWVMDAQKAQENVEAMTRSTIGVAECPVGELPVDGKERTAGE CHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA